RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 OVCH2Q7RTZ1 564 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 PIP4P2Q8N4L2 257 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 LINC00311Q8N616 119 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 OR8U1Q8NH10 309 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 SECTM1Q8WVN6 248 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 C17orf50Q8WW18 174 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 RPEQ96AT9 228 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 ABHD14BQ96IU4 210 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 BEX2Q9BXY8 128 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 CDC42EP3Q9UKI2 254 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 OR2W1Q9Y3N9 320 aa11.02□□□□□ -0.65
CPNE1-227ENST00000498056 TBL2Q9Y4P3 447 aaKnown RBP11.02□□□□□ -0.65
CPNE1-227ENST00000498056 IGKV1D-13A0A0B4J2D9 117 aa11.01□□□□□ -0.65
CPNE1-227ENST00000498056 MDFIC2A0A1B0GVS7 189 aa11.01□□□□□ -0.65
CPNE1-227ENST00000498056 BUB1B-PAK6H3BSN5 160 aa11.01□□□□□ -0.65
CPNE1-227ENST00000498056 TUSC2O75896 110 aa11.01□□□□□ -0.65
CPNE1-227ENST00000498056 IGKV1-13P0DP09 117 aa11.01□□□□□ -0.65
CPNE1-227ENST00000498056 SRD5A1P18405 259 aa11.01□□□□□ -0.65
CPNE1-227ENST00000498056 CEACAM3P40198 252 aa11.01□□□□□ -0.65
CPNE1-227ENST00000498056 REG1BP48304 166 aa11.01□□□□□ -0.65
CPNE1-227ENST00000498056 LUMP51884 338 aaPredicted RBP11.01□□□□□ -0.65
CPNE1-227ENST00000498056 ARRDC1Q8N5I2 433 aa11.01□□□□□ -0.65
CPNE1-227ENST00000498056 C8orf31Q8N9H6 132 aa11.01□□□□□ -0.65
CPNE1-227ENST00000498056 OR6F1Q8NGZ6 308 aa11.01□□□□□ -0.65
CPNE1-227ENST00000498056 CREB3L1Q96BA8 519 aa11.01□□□□□ -0.65
CPNE1-227ENST00000498056 SLC6A7Q99884 636 aa11.01□□□□□ -0.65
CPNE1-227ENST00000498056 ZNF221Q9UK13 617 aa11.01□□□□□ -0.65
CPNE1-227ENST00000498056 RNF150Q9ULK6 438 aa11.01□□□□□ -0.65
CPNE1-227ENST00000498056 FAM96BQ9Y3D0 163 aa11.01□□□□□ -0.65
CPNE1-227ENST00000498056 HILPDAQ9Y5L2 63 aa11.01□□□□□ -0.65
CPNE1-227ENST00000498056 SVEP1Q4LDE5 3571 aa11.01□□□□□ -0.65
CPNE1-227ENST00000498056 MTORP42345 2549 aa11□□□□□ -0.65
CPNE1-227ENST00000498056 UPK1BO75841 260 aa11□□□□□ -0.65
CPNE1-227ENST00000498056 PAX6P26367 422 aa11□□□□□ -0.65
CPNE1-227ENST00000498056 SSX2Q16385 188 aa11□□□□□ -0.65
CPNE1-227ENST00000498056 RPL39P5Q59GN2 51 aa11□□□□□ -0.65
CPNE1-227ENST00000498056 LY6G6FQ5SQ64 297 aa11□□□□□ -0.65
CPNE1-227ENST00000498056 LDLRAD2Q5SZI1 272 aa11□□□□□ -0.65
CPNE1-227ENST00000498056 TPTE2P1Q5T6R2 138 aa11□□□□□ -0.65
CPNE1-227ENST00000498056 MINOS1Q5TGZ0 78 aa11□□□□□ -0.65
CPNE1-227ENST00000498056 BCL6BQ8N143 479 aaPredicted RBP11□□□□□ -0.65
CPNE1-227ENST00000498056 OR51S1Q8NGJ8 323 aa11□□□□□ -0.65
CPNE1-227ENST00000498056 MOB3AQ96BX8 217 aa11□□□□□ -0.65
CPNE1-227ENST00000498056 SLC5A7Q9GZV3 580 aa11□□□□□ -0.65
CPNE1-227ENST00000498056 TOLLIPQ9H0E2 274 aa11□□□□□ -0.65
CPNE1-227ENST00000498056 HRASLSQ9HDD0 168 aa11□□□□□ -0.65
CPNE1-227ENST00000498056 PIPOXQ9P0Z9 390 aa11□□□□□ -0.65
CPNE1-227ENST00000498056 SOX21Q9Y651 276 aaPredicted RBP11□□□□□ -0.65
CPNE1-227ENST00000498056 MINOS1-NBL1R4GNA1 71 aa11□□□□□ -0.65
CPNE1-227ENST00000498056 CENPXA8MT69 81 aa10.99□□□□□ -0.65
CPNE1-227ENST00000498056 LEUTXA8MZ59 168 aa10.99□□□□□ -0.65
CPNE1-227ENST00000498056 ITGB1BP1O14713 200 aa10.99□□□□□ -0.65
CPNE1-227ENST00000498056 RAB29O14966 203 aa10.99□□□□□ -0.65
CPNE1-227ENST00000498056 FBP1P09467 338 aa10.99□□□□□ -0.65
CPNE1-227ENST00000498056 PGAM2P15259 253 aa10.99□□□□□ -0.65
CPNE1-227ENST00000498056 BPIFB3P59826 476 aa10.99□□□□□ -0.65
CPNE1-227ENST00000498056 BAMBIQ13145 260 aa10.99□□□□□ -0.65
CPNE1-227ENST00000498056 SCGB2A2Q13296 93 aa10.99□□□□□ -0.65
CPNE1-227ENST00000498056 DIAPH2-AS1Q14236 149 aa10.99□□□□□ -0.65
CPNE1-227ENST00000498056 ZNF660Q6AZW8 331 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-227ENST00000498056 C16orf87Q6PH81 154 aa10.99□□□□□ -0.65
CPNE1-227ENST00000498056 LDLRAD3Q86YD5 345 aa10.99□□□□□ -0.65
CPNE1-227ENST00000498056 TGIF2LXQ8IUE1 241 aa10.99□□□□□ -0.65
CPNE1-227ENST00000498056 ZNF645Q8N7E2 425 aa10.99□□□□□ -0.65
CPNE1-227ENST00000498056 GIMAP1Q8WWP7 306 aa10.99□□□□□ -0.65
CPNE1-227ENST00000498056 BORCS5Q969J3 196 aa10.99□□□□□ -0.65
CPNE1-227ENST00000498056 PRRT1Q99946 306 aa10.99□□□□□ -0.65
CPNE1-227ENST00000498056 DPM3Q9P2X0 92 aa10.99□□□□□ -0.65
CPNE1-227ENST00000498056 FN1P02751 2386 aaKnown RBP10.99□□□□□ -0.65
CPNE1-227ENST00000498056 OR5H14A6NHG9 310 aa10.98□□□□□ -0.65
CPNE1-227ENST00000498056 M0R1X1 148 aa10.98□□□□□ -0.65
CPNE1-227ENST00000498056 ZNF735P0CB33 412 aa10.98□□□□□ -0.65
CPNE1-227ENST00000498056 ARHGDIBP52566 201 aa10.98□□□□□ -0.65
CPNE1-227ENST00000498056 DEFB112Q30KQ8 113 aa10.98□□□□□ -0.65
CPNE1-227ENST00000498056 IDO2Q6ZQW0 420 aa10.98□□□□□ -0.65
CPNE1-227ENST00000498056 C9orf139Q6ZV77 190 aa10.98□□□□□ -0.65
CPNE1-227ENST00000498056 ODF3L1Q8IXM7 274 aa10.98□□□□□ -0.65
CPNE1-227ENST00000498056 DYNAPQ8N1N2 210 aa10.98□□□□□ -0.65
CPNE1-227ENST00000498056 FAM216AQ8WUB2 273 aa10.98□□□□□ -0.65
CPNE1-227ENST00000498056 RTN4IP1Q8WWV3 396 aaPredicted RBP10.98□□□□□ -0.65
CPNE1-227ENST00000498056 DEDD2Q8WXF8 326 aa10.98□□□□□ -0.65
CPNE1-227ENST00000498056 S1PR3Q99500 378 aa10.98□□□□□ -0.65
CPNE1-227ENST00000498056 AGMATQ9BSE5 352 aa10.98□□□□□ -0.65
CPNE1-227ENST00000498056 MRPL20Q9BYC9 149 aaKnown RBP10.98□□□□□ -0.65
CPNE1-227ENST00000498056 CCL28Q9NRJ3 127 aa10.98□□□□□ -0.65
CPNE1-227ENST00000498056 SCP2D1Q9UJQ7 156 aa10.98□□□□□ -0.65
CPNE1-227ENST00000498056 TEP1Q99973 2627 aaKnown RBP10.97□□□□□ -0.65
CPNE1-227ENST00000498056 A0A1W2PPI3 338 aa10.97□□□□□ -0.65
CPNE1-227ENST00000498056 LYRM1O43325 122 aa10.97□□□□□ -0.65
CPNE1-227ENST00000498056 TXNL1O43396 289 aa10.97□□□□□ -0.65
CPNE1-227ENST00000498056 ZNF137PP52743 207 aa10.97□□□□□ -0.65
CPNE1-227ENST00000498056 AADACL3Q5VUY0 350 aa10.97□□□□□ -0.65
CPNE1-227ENST00000498056 CCDC144NLQ6NUI1 221 aa10.97□□□□□ -0.65
CPNE1-227ENST00000498056 FAM71F2Q6NXP2 309 aa10.97□□□□□ -0.65
CPNE1-227ENST00000498056 DHRS11Q6UWP2 260 aa10.97□□□□□ -0.65
CPNE1-227ENST00000498056 ZNF833PQ6ZTB9 187 aa10.97□□□□□ -0.65
CPNE1-227ENST00000498056 LHFPL1Q86WI0 220 aa10.97□□□□□ -0.65
CPNE1-227ENST00000498056 DRAM1Q8N682 238 aa10.97□□□□□ -0.65
CPNE1-227ENST00000498056 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.97□□□□□ -0.65
CPNE1-227ENST00000498056 MARCH1Q8TCQ1 289 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms