RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 VCX3BQ9H321 246 aa1.81□□□□□ -2.12
RIF1-212ENST00000498041 Q9H521 79 aa1.81□□□□□ -2.12
RIF1-212ENST00000498041 EXO5Q9H790 373 aa1.81□□□□□ -2.12
RIF1-212ENST00000498041 YY1AP1Q9H869 796 aa1.81□□□□□ -2.12
RIF1-212ENST00000498041 FN3KRPQ9HA64 309 aa1.81□□□□□ -2.12
RIF1-212ENST00000498041 CRLF2Q9HC73 371 aa1.81□□□□□ -2.12
RIF1-212ENST00000498041 GPR84Q9NQS5 396 aa1.81□□□□□ -2.12
RIF1-212ENST00000498041 MMP26Q9NRE1 261 aa1.81□□□□□ -2.12
RIF1-212ENST00000498041 POLE3Q9NRF9 147 aa1.81□□□□□ -2.12
RIF1-212ENST00000498041 C14orf105Q9NVL8 296 aa1.81□□□□□ -2.12
RIF1-212ENST00000498041 FAM206AQ9NX38 181 aa1.81□□□□□ -2.12
RIF1-212ENST00000498041 GLTPQ9NZD2 209 aa1.81□□□□□ -2.12
RIF1-212ENST00000498041 CALML5Q9NZT1 146 aa1.81□□□□□ -2.12
RIF1-212ENST00000498041 ZNF229Q9UJW7 825 aa1.81□□□□□ -2.12
RIF1-212ENST00000498041 OR52A1Q9UKL2 312 aa1.81□□□□□ -2.12
RIF1-212ENST00000498041 ING4Q9UNL4 249 aa1.81□□□□□ -2.12
RIF1-212ENST00000498041 MRPS7Q9Y2R9 242 aaKnown RBP1.81□□□□□ -2.12
RIF1-212ENST00000498041 RBMX2Q9Y388 322 aaKnown RBP1.81□□□□□ -2.12
RIF1-212ENST00000498041 ORC6Q9Y5N6 252 aa1.81□□□□□ -2.12
RIF1-212ENST00000498041 VWFP04275 2813 aa1.81□□□□□ -2.12
RIF1-212ENST00000498041 EP300Q09472 2414 aaPredicted RBP1.8□□□□□ -2.12
RIF1-212ENST00000498041 SPTBN4Q9H254 2564 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 TRAV6A0A075B6T7 132 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 TRGV5A0A0B4J1U4 118 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 SMIM31A0A1B0GVY4 71 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 TMEM269A0A1B0GVZ9 245 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 CIB4A0PJX0 185 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 PSMB11A5LHX3 300 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 DPRXA6NFQ7 191 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 ZNF726A6NNF4 738 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 RIIAD1A6NNX1 92 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 ZNF850A8MQ14 1090 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 FAM25AB3EWG3 89 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 FAM25CB3EWG5 89 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 FAM25GB3EWG6 89 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 ZNF879B4DU55 563 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 CCRL2O00421 344 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 SDCBPO00560 298 aaPredicted RBP1.8□□□□□ -2.12
RIF1-212ENST00000498041 TP53I11O14683 189 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 MYL12BO14950 172 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 EEF1E1O43324 174 aaKnown RBP1.8□□□□□ -2.12
RIF1-212ENST00000498041 EIF3GO75821 320 aaKnown RBP eCLIP1.8□□□□□ -2.12
RIF1-212ENST00000498041 TNFSF13O75888 250 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 SULT1C4O75897 302 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 PTBP3O95758 552 aaKnown RBP1.8□□□□□ -2.12
RIF1-212ENST00000498041 AK1P00568 194 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 IGHMP01871 453 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 HMGN1P05114 100 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 ZNF735P0CB33 412 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 CD79AP11912 226 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 PIPP12273 146 aaPredicted RBP1.8□□□□□ -2.12
RIF1-212ENST00000498041 RPS2P15880 293 aaKnown RBP1.8□□□□□ -2.12
RIF1-212ENST00000498041 IGFBP3P17936 291 aaPredicted RBP1.8□□□□□ -2.12
RIF1-212ENST00000498041 SRMP19623 302 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 HTR2CP28335 458 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 IFNGR2P38484 337 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 RBM34P42696 430 aaKnown RBP1.8□□□□□ -2.12
RIF1-212ENST00000498041 CSNK1A1P48729 337 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 CX3CR1P49238 355 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 EVX1P49640 407 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 ZNF83P51522 516 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 TDGF1P3P51864 188 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 PSMD4P55036 377 aaKnown RBP1.8□□□□□ -2.12
RIF1-212ENST00000498041 TMBIM6P55061 237 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 SMIM11AP58511 58 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 HIST1H3AP68431 136 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 PSPHP78330 225 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 SLC35A1P78382 337 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 QRFPP83859 136 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 RAB40BQ12829 278 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 MLLT11Q13015 90 aaPredicted RBP1.8□□□□□ -2.12
RIF1-212ENST00000498041 SELENBP1Q13228 472 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 GGTLC2Q14390 218 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 GPR176Q14439 515 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 GABRA6Q16445 453 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 MOGQ16653 247 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 PABPC1L2AQ5JQF8 200 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 THEM4Q5T1C6 240 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 HIST2H3PS2Q5TEC6 136 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 CYB5R2Q6BCY4 276 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 OR2T2Q6IF00 324 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 OR52W1Q6IF63 320 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 CD200R1LQ6Q8B3 271 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 HIST2H3AQ71DI3 136 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 ERASQ7Z444 233 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 LINC01561Q8N1V8 128 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 SLC22A24Q8N4F4 322 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 ZNF283Q8N7M2 679 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 TPRX1Q8N7U7 411 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 CNEP1R1Q8N9A8 125 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 ZFP62Q8NB50 900 aaPredicted RBP1.8□□□□□ -2.12
RIF1-212ENST00000498041 SUMF2Q8NBJ7 301 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 NOXO1Q8NFA2 376 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 OR52L1Q8NGH7 329 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 OR13C9Q8NGT0 318 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 OR6N1Q8NGY5 312 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 OR2T27Q8NH04 317 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 OR6X1Q8NH79 312 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 OTOSQ8NHW6 89 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 ZNF420Q8TAQ5 688 aaPredicted RBP1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms