RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 CNTFRP26992 372 aa9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 BLVRBP30043 206 aaPredicted RBP9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 PPIFP30405 207 aaKnown RBP9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 ZNF616Q08AN1 781 aa9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 FHL3Q13643 280 aa9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 MED22Q15528 200 aa9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 ZNF260Q3ZCT1 412 aa9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 LCE2CQ5TA81 110 aa9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 C5orf24Q7Z6I8 188 aa9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 ZNF491Q8N8L2 437 aa9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 NPBQ8NG41 125 aa9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 OR1N2Q8NGR9 330 aa9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 MYOZ3Q8TDC0 251 aa9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 RITA1Q96K30 269 aa9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 URM1Q9BTM9 101 aaKnown RBP9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 TM2D1Q9BX74 207 aa9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 GHITMQ9H3K2 345 aa9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 RIMS4Q9H426 269 aaPredicted RBP9.17□□□□□ -0.94
NUDCD3-211ENST00000497978 IGHV7-81A0A0B4J1V7 117 aa9.16□□□□□ -0.94
NUDCD3-211ENST00000497978 OR5H14A6NHG9 310 aa9.16□□□□□ -0.94
NUDCD3-211ENST00000497978 SLC22A1O15245 554 aa9.16□□□□□ -0.94
NUDCD3-211ENST00000497978 IGLV1-40P01703 118 aa9.16□□□□□ -0.94
NUDCD3-211ENST00000497978 MC5RP33032 325 aa9.16□□□□□ -0.94
NUDCD3-211ENST00000497978 RAB9AP51151 201 aa9.16□□□□□ -0.94
NUDCD3-211ENST00000497978 INSL3P51460 131 aa9.16□□□□□ -0.94
NUDCD3-211ENST00000497978 RUNX1Q01196 453 aa9.16□□□□□ -0.94
NUDCD3-211ENST00000497978 PLGLAQ15195 96 aa9.16□□□□□ -0.94
NUDCD3-211ENST00000497978 SVOPQ8N4V2 548 aa9.16□□□□□ -0.94
NUDCD3-211ENST00000497978 OR6M1Q8NGM8 313 aa9.16□□□□□ -0.94
NUDCD3-211ENST00000497978 UFD1Q92890 307 aa9.16□□□□□ -0.94
NUDCD3-211ENST00000497978 CYYR1Q96J86 154 aa9.16□□□□□ -0.94
NUDCD3-211ENST00000497978 PRR25Q96S07 402 aa9.16□□□□□ -0.94
NUDCD3-211ENST00000497978 NICN1Q9BSH3 213 aa9.16□□□□□ -0.94
NUDCD3-211ENST00000497978 KLK15Q9H2R5 256 aa9.16□□□□□ -0.94
NUDCD3-211ENST00000497978 IFI27L2Q9H2X8 130 aa9.16□□□□□ -0.94
NUDCD3-211ENST00000497978 GNB4Q9HAV0 340 aa9.16□□□□□ -0.94
NUDCD3-211ENST00000497978 SLC23A1Q9UHI7 598 aa9.16□□□□□ -0.94
NUDCD3-211ENST00000497978 SCOCQ9UIL1 159 aa9.16□□□□□ -0.94
NUDCD3-211ENST00000497978 MGAT4AQ9UM21 535 aa9.16□□□□□ -0.94
NUDCD3-211ENST00000497978 TMEM14DPA8MWL7 114 aa9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 H7C2Y5 167 aa9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 I3L521 148 aa9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 ITGB1BP1O14713 200 aa9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 HSPA12AO43301 675 aa9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 RBBP9O75884 186 aa9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 NDUFA3O95167 84 aa9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 NAPSAO96009 420 aa9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 GSTP1P09211 210 aaKnown RBP9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 UCHL1P09936 223 aa9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 ARSBP15848 533 aa9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 ZBTB25P24278 435 aa9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 RANBP1P43487 201 aa9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 TMEM267Q0VDI3 215 aaPredicted RBP9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 UNC119Q13432 240 aa9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 KIAA0141Q14154 515 aaPredicted RBP9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 ECSCRQ19T08 205 aa9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 ZNF660Q6AZW8 331 aaPredicted RBP9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 ZNF880Q6PDB4 577 aa9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 FAM131AQ6UXB0 335 aa9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 MINDY2Q8NBR6 621 aa9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 ABHD5Q8WTS1 349 aa9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 EDARADDQ8WWZ3 215 aa9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 OR5B12Q96R08 314 aa9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 PLGRKTQ9HBL7 147 aa9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 ZNF256Q9Y2P7 627 aaPredicted RBP9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 LSM2Q9Y333 95 aaKnown RBP9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 LSM4Q9Y4Z0 139 aaKnown RBP9.15□□□□□ -0.94
NUDCD3-211ENST00000497978 TRBV6-6A0A0A6YYG2 114 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 RRHO14718 337 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 LY86O95711 162 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 HSMCR30P0CW71 290 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 CT45A6P0DMU7 189 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 CT45A5P0DMU8 189 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 CT45A7P0DMV0 189 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 CD37P11049 281 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 CEACAM6P40199 344 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 QRFPP83859 136 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 TAGLNQ01995 201 aaKnown RBP9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 TRAM1Q15629 374 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 RPL39P5Q59GN2 51 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 LIPKQ5VXJ0 399 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 ZNF429Q86V71 674 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 TCTEX1D1Q8N7M0 179 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 TMEM203Q969S6 136 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 RNF5Q99942 180 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 KCNK15Q9H427 330 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 FBXL15Q9H469 300 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 AK3Q9UIJ7 227 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 RNF150Q9ULK6 438 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 FOXA2Q9Y261 457 aaPredicted RBP9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 WASHC3Q9Y3C0 194 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 TPRKBQ9Y3C4 175 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 U3KQK5 164 aa9.14□□□□□ -0.95
NUDCD3-211ENST00000497978 A0A1W2PN81 502 aa9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 H0YJW9 148 aa9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 SLC17A2O00624 439 aa9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 OVOL1O14753 267 aa9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 SOCS1O15524 211 aa9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 ARL6IP5O75915 188 aa9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 PSMA1P25786 263 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms