RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 IFNA6P05013 189 aa9.61□□□□□ -0.87
CUX1-210ENST00000497815 CSF1P09603 554 aa9.61□□□□□ -0.87
CUX1-210ENST00000497815 SAA2P0DJI9 122 aaPredicted RBP9.61□□□□□ -0.87
CUX1-210ENST00000497815 GPR12P47775 334 aa9.61□□□□□ -0.87
CUX1-210ENST00000497815 RAB13P51153 203 aa9.61□□□□□ -0.87
CUX1-210ENST00000497815 TAS2R19P59542 299 aa9.61□□□□□ -0.87
CUX1-210ENST00000497815 FXYD4P59646 89 aa9.61□□□□□ -0.87
CUX1-210ENST00000497815 TSPAN5P62079 268 aa9.61□□□□□ -0.87
CUX1-210ENST00000497815 ZNF45Q02386 682 aa9.61□□□□□ -0.87
CUX1-210ENST00000497815 SSBP1Q04837 148 aaKnown RBP9.61□□□□□ -0.87
CUX1-210ENST00000497815 BAMBIQ13145 260 aa9.61□□□□□ -0.87
CUX1-210ENST00000497815 DYRK1AQ13627 763 aa9.61□□□□□ -0.87
CUX1-210ENST00000497815 ACTBL2Q562R1 376 aa9.61□□□□□ -0.87
CUX1-210ENST00000497815 RPL39P5Q59GN2 51 aa9.61□□□□□ -0.87
CUX1-210ENST00000497815 FAAP20Q6NZ36 180 aa9.61□□□□□ -0.87
CUX1-210ENST00000497815 OVCH2Q7RTZ1 564 aa9.61□□□□□ -0.87
CUX1-210ENST00000497815 ODF3L1Q8IXM7 274 aa9.61□□□□□ -0.87
CUX1-210ENST00000497815 OR4D10Q8NGI6 311 aa9.61□□□□□ -0.87
CUX1-210ENST00000497815 SSX3Q99909 188 aa9.61□□□□□ -0.87
CUX1-210ENST00000497815 ZNF2Q9BSG1 426 aaPredicted RBP9.61□□□□□ -0.87
CUX1-210ENST00000497815 TOLLIPQ9H0E2 274 aa9.61□□□□□ -0.87
CUX1-210ENST00000497815 ZNF221Q9UK13 617 aa9.61□□□□□ -0.87
CUX1-210ENST00000497815 RBMX2Q9Y388 322 aaKnown RBP9.61□□□□□ -0.87
CUX1-210ENST00000497815 OR2W1Q9Y3N9 320 aa9.61□□□□□ -0.87
CUX1-210ENST00000497815 SONP18583 2426 aaKnown RBP9.61□□□□□ -0.87
CUX1-210ENST00000497815 FN1P02751 2386 aaKnown RBP9.6□□□□□ -0.87
CUX1-210ENST00000497815 IGKV1D-13A0A0B4J2D9 117 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 ANKRD20A5PA0PJZ0 165 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 H3BUX3 64 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 ITGB1BP1O14713 200 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 RAB29O14966 203 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 TUSC2O75896 110 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 RAB3DO95716 219 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 PPYP01298 95 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 GAPDHP04406 335 aaKnown RBP9.6□□□□□ -0.87
CUX1-210ENST00000497815 IGKV1-13P0DP09 117 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 CD24P25063 80 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 LUMP51884 338 aaPredicted RBP9.6□□□□□ -0.87
CUX1-210ENST00000497815 HERV-K104P61576 105 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 SRSF2Q01130 221 aaKnown RBP9.6□□□□□ -0.87
CUX1-210ENST00000497815 BAK1Q16611 211 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 LRRC75BQ2VPJ9 315 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 TRIQKQ629K1 86 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 STEAP1BQ6NZ63 245 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 Q6YL49 198 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 LINC00299Q6ZSB3 139 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 MOB3BQ86TA1 216 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 TMEM17Q86X19 198 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 LDLRAD3Q86YD5 345 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 TGIF2LXQ8IUE1 241 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 GDPD1Q8N9F7 314 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 OR6F1Q8NGZ6 308 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 SECTM1Q8WVN6 248 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 RTN4IP1Q8WWV3 396 aaPredicted RBP9.6□□□□□ -0.87
CUX1-210ENST00000497815 TRIM63Q969Q1 353 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 ST6GALNAC6Q969X2 333 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 S1PR3Q99500 378 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 AGMATQ9BSE5 352 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 MEGF9Q9H1U4 602 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 ABCB10Q9NRK6 738 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 TAS2R8Q9NYW2 309 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 PIPOXQ9P0Z9 390 aa9.6□□□□□ -0.87
CUX1-210ENST00000497815 ANK3Q12955 4377 aaKnown RBP9.6□□□□□ -0.87
CUX1-210ENST00000497815 IGHV3-72A0A0B4J1Y9 119 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 IGHV1-3A0A0C4DH29 117 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 LINC00854A0A1B0GVQ3 168 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 A0A1W2PPI3 338 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 DNAJC9-AS1A6NH13 148 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 OOSP1A8MZH6 123 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 TIMM23O14925 209 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 TCF21O43680 179 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 AMY2AP04746 511 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 AKAIN1P0CW23 69 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 TBPP20226 339 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 IER3P46695 156 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 INPP1P49441 399 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 ARHGDIBP52566 201 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 ZNF137PP52743 207 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 ZNF816Q0VGE8 651 aaPredicted RBP9.59□□□□□ -0.87
CUX1-210ENST00000497815 LY6EQ16553 131 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 VAX1Q5SQQ9 334 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 ZNF57Q68EA5 555 aaPredicted RBP9.59□□□□□ -0.87
CUX1-210ENST00000497815 CCDC144NLQ6NUI1 221 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 ZNF833PQ6ZTB9 187 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 TOMM5Q8N4H5 51 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 DRAM1Q8N682 238 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 DRAXINQ8NBI3 349 aaPredicted RBP9.59□□□□□ -0.87
CUX1-210ENST00000497815 OR56B4Q8NH76 319 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 GIMAP1Q8WWP7 306 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 S100ZQ8WXG8 99 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 RBMXL1Q96E39 390 aaKnown RBP9.59□□□□□ -0.87
CUX1-210ENST00000497815 SDHCQ99643 169 aaPredicted RBP9.59□□□□□ -0.87
CUX1-210ENST00000497815 MRPL20Q9BYC9 149 aaKnown RBP9.59□□□□□ -0.87
CUX1-210ENST00000497815 SLC5A7Q9GZV3 580 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 ESM1Q9NQ30 184 aa9.59□□□□□ -0.87
CUX1-210ENST00000497815 ZNF107Q9UII5 783 aaPredicted RBP9.59□□□□□ -0.87
CUX1-210ENST00000497815 TEP1Q99973 2627 aaKnown RBP9.59□□□□□ -0.87
CUX1-210ENST00000497815 NSD1Q96L73 2696 aaPredicted RBP9.59□□□□□ -0.88
CUX1-210ENST00000497815 BTBD17A6NE02 478 aa9.58□□□□□ -0.88
CUX1-210ENST00000497815 M0R1X1 148 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms