RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 HILPDAQ9Y5L2 63 aa16.22■□□□□ 0.19
CTSD-206ENST00000497544 ST8SIA5O15466 376 aa16.21■□□□□ 0.19
CTSD-206ENST00000497544 HRH1P35367 487 aa16.21■□□□□ 0.19
CTSD-206ENST00000497544 RFX2P48378 723 aa16.21■□□□□ 0.19
CTSD-206ENST00000497544 TAS2R19P59542 299 aa16.21■□□□□ 0.19
CTSD-206ENST00000497544 ACTBL2Q562R1 376 aa16.21■□□□□ 0.19
CTSD-206ENST00000497544 LDLRAD2Q5SZI1 272 aa16.21■□□□□ 0.19
CTSD-206ENST00000497544 TPTE2P1Q5T6R2 138 aa16.21■□□□□ 0.19
CTSD-206ENST00000497544 GDPD1Q8N9F7 314 aa16.21■□□□□ 0.19
CTSD-206ENST00000497544 TMEM229BQ8NBD8 167 aa16.21■□□□□ 0.19
CTSD-206ENST00000497544 SRRQ9GZT4 340 aa16.21■□□□□ 0.19
CTSD-206ENST00000497544 PARP12Q9H0J9 701 aaKnown RBP16.21■□□□□ 0.19
CTSD-206ENST00000497544 MEGF9Q9H1U4 602 aa16.21■□□□□ 0.19
CTSD-206ENST00000497544 GHITMQ9H3K2 345 aa16.21■□□□□ 0.19
CTSD-206ENST00000497544 ZNF107Q9UII5 783 aaPredicted RBP16.21■□□□□ 0.19
CTSD-206ENST00000497544 RNF150Q9ULK6 438 aa16.21■□□□□ 0.19
CTSD-206ENST00000497544 RBMX2Q9Y388 322 aaKnown RBP16.21■□□□□ 0.19
CTSD-206ENST00000497544 LY6LH3BQJ8 138 aa16.2■□□□□ 0.18
CTSD-206ENST00000497544 J3QRK9 145 aa16.2■□□□□ 0.18
CTSD-206ENST00000497544 CSF1P09603 554 aa16.2■□□□□ 0.18
CTSD-206ENST00000497544 OR8U9P0C7N5 309 aa16.2■□□□□ 0.18
CTSD-206ENST00000497544 FCGR2CP31995 323 aa16.2■□□□□ 0.18
CTSD-206ENST00000497544 TSPAN5P62079 268 aa16.2■□□□□ 0.18
CTSD-206ENST00000497544 DYRK1AQ13627 763 aa16.2■□□□□ 0.18
CTSD-206ENST00000497544 RNASE10Q5GAN6 216 aaKnown RBP16.2■□□□□ 0.18
CTSD-206ENST00000497544 OVCH2Q7RTZ1 564 aa16.2■□□□□ 0.18
CTSD-206ENST00000497544 OR8U1Q8NH10 309 aa16.2■□□□□ 0.18
CTSD-206ENST00000497544 ZNF418Q8TF45 676 aaPredicted RBP16.2■□□□□ 0.18
CTSD-206ENST00000497544 TOMM40LQ969M1 308 aa16.2■□□□□ 0.18
CTSD-206ENST00000497544 AJUBAQ96IF1 538 aa16.2■□□□□ 0.18
CTSD-206ENST00000497544 PIPOXQ9P0Z9 390 aa16.2■□□□□ 0.18
CTSD-206ENST00000497544 ZNF221Q9UK13 617 aa16.2■□□□□ 0.18
CTSD-206ENST00000497544 OR2W1Q9Y3N9 320 aa16.2■□□□□ 0.18
CTSD-206ENST00000497544 MDFIC2A0A1B0GVS7 189 aa16.19■□□□□ 0.18
CTSD-206ENST00000497544 RAB29O14966 203 aa16.19■□□□□ 0.18
CTSD-206ENST00000497544 CD3DP04234 171 aa16.19■□□□□ 0.18
CTSD-206ENST00000497544 GAPDHP04406 335 aaKnown RBP16.19■□□□□ 0.18
CTSD-206ENST00000497544 IFNA6P05013 189 aa16.19■□□□□ 0.18
CTSD-206ENST00000497544 TBPP20226 339 aa16.19■□□□□ 0.18
CTSD-206ENST00000497544 LUMP51884 338 aaPredicted RBP16.19■□□□□ 0.18
CTSD-206ENST00000497544 ARHGDIBP52566 201 aa16.19■□□□□ 0.18
CTSD-206ENST00000497544 DHRS11Q6UWP2 260 aa16.19■□□□□ 0.18
CTSD-206ENST00000497544 SIGLECL1Q8N7X8 197 aa16.19■□□□□ 0.18
CTSD-206ENST00000497544 OR6F1Q8NGZ6 308 aa16.19■□□□□ 0.18
CTSD-206ENST00000497544 GIMAP1Q8WWP7 306 aa16.19■□□□□ 0.18
CTSD-206ENST00000497544 ABHD14BQ96IU4 210 aa16.19■□□□□ 0.18
CTSD-206ENST00000497544 AKIP1Q9NQ31 210 aa16.19■□□□□ 0.18
CTSD-206ENST00000497544 OOSP1A8MZH6 123 aa16.18■□□□□ 0.18
CTSD-206ENST00000497544 M0QYG6 137 aa16.18■□□□□ 0.18
CTSD-206ENST00000497544 LANCL1O43813 399 aa16.18■□□□□ 0.18
CTSD-206ENST00000497544 RAB3DO95716 219 aa16.18■□□□□ 0.18
CTSD-206ENST00000497544 INPP1P49441 399 aa16.18■□□□□ 0.18
CTSD-206ENST00000497544 CCDC144NLQ6NUI1 221 aa16.18■□□□□ 0.18
CTSD-206ENST00000497544 STEAP1BQ6NZ63 245 aa16.18■□□□□ 0.18
CTSD-206ENST00000497544 TMEM17Q86X19 198 aa16.18■□□□□ 0.18
CTSD-206ENST00000497544 DYNAPQ8N1N2 210 aa16.18■□□□□ 0.18
CTSD-206ENST00000497544 FAM216AQ8WUB2 273 aa16.18■□□□□ 0.18
CTSD-206ENST00000497544 ZNF48Q96MX3 618 aaPredicted RBP16.18■□□□□ 0.18
CTSD-206ENST00000497544 S1PR3Q99500 378 aa16.18■□□□□ 0.18
CTSD-206ENST00000497544 AGMATQ9BSE5 352 aa16.18■□□□□ 0.18
CTSD-206ENST00000497544 IFI27L2Q9H2X8 130 aa16.18■□□□□ 0.18
CTSD-206ENST00000497544 PRDM13Q9H4Q3 707 aa16.18■□□□□ 0.18
CTSD-206ENST00000497544 ANKRD20A5PA0PJZ0 165 aa16.17■□□□□ 0.18
CTSD-206ENST00000497544 HSD17B6O14756 317 aa16.17■□□□□ 0.18
CTSD-206ENST00000497544 TUSC2O75896 110 aa16.17■□□□□ 0.18
CTSD-206ENST00000497544 AADACP22760 399 aa16.17■□□□□ 0.18
CTSD-206ENST00000497544 PAX6P26367 422 aa16.17■□□□□ 0.18
CTSD-206ENST00000497544 GPR12P47775 334 aa16.17■□□□□ 0.18
CTSD-206ENST00000497544 ZNF137PP52743 207 aa16.17■□□□□ 0.18
CTSD-206ENST00000497544 HERV-K104P61576 105 aa16.17■□□□□ 0.18
CTSD-206ENST00000497544 DIAPH2-AS1Q14236 149 aa16.17■□□□□ 0.18
CTSD-206ENST00000497544 PLA1AQ53H76 456 aa16.17■□□□□ 0.18
CTSD-206ENST00000497544 VAX1Q5SQQ9 334 aa16.17■□□□□ 0.18
CTSD-206ENST00000497544 Q6YL49 198 aa16.17■□□□□ 0.18
CTSD-206ENST00000497544 MFSD4AQ8N468 514 aa16.17■□□□□ 0.18
CTSD-206ENST00000497544 ST6GALNAC6Q969X2 333 aa16.17■□□□□ 0.18
CTSD-206ENST00000497544 SSX3Q99909 188 aa16.17■□□□□ 0.18
CTSD-206ENST00000497544 ZNF2Q9BSG1 426 aaPredicted RBP16.17■□□□□ 0.18
CTSD-206ENST00000497544 TINAGL1Q9GZM7 467 aaPredicted RBP16.17■□□□□ 0.18
CTSD-206ENST00000497544 PPYP01298 95 aa16.16■□□□□ 0.18
CTSD-206ENST00000497544 CD74P04233 296 aa16.16■□□□□ 0.18
CTSD-206ENST00000497544 AKAIN1P0CW23 69 aa16.16■□□□□ 0.18
CTSD-206ENST00000497544 BRS3P32247 399 aa16.16■□□□□ 0.18
CTSD-206ENST00000497544 REG1BP48304 166 aa16.16■□□□□ 0.18
CTSD-206ENST00000497544 FXYD4P59646 89 aa16.16■□□□□ 0.18
CTSD-206ENST00000497544 AP3S2P59780 193 aa16.16■□□□□ 0.18
CTSD-206ENST00000497544 TUSC1Q2TAM9 212 aa16.16■□□□□ 0.18
CTSD-206ENST00000497544 TRIQKQ629K1 86 aa16.16■□□□□ 0.18
CTSD-206ENST00000497544 MOB3BQ86TA1 216 aa16.16■□□□□ 0.18
CTSD-206ENST00000497544 LDLRAD3Q86YD5 345 aa16.16■□□□□ 0.18
CTSD-206ENST00000497544 TGIF2LXQ8IUE1 241 aa16.16■□□□□ 0.18
CTSD-206ENST00000497544 ODF3L1Q8IXM7 274 aa16.16■□□□□ 0.18
CTSD-206ENST00000497544 OR8H3Q8N146 312 aa16.16■□□□□ 0.18
CTSD-206ENST00000497544 TOMM5Q8N4H5 51 aa16.16■□□□□ 0.18
CTSD-206ENST00000497544 OR2D2Q9H210 308 aa16.16■□□□□ 0.18
CTSD-206ENST00000497544 DPAGT1Q9H3H5 408 aa16.16■□□□□ 0.18
CTSD-206ENST00000497544 ABCB10Q9NRK6 738 aa16.16■□□□□ 0.18
CTSD-206ENST00000497544 GAB2Q9UQC2 676 aa16.16■□□□□ 0.18
CTSD-206ENST00000497544 NOTCH1P46531 2555 aa16.16■□□□□ 0.18
CTSD-206ENST00000497544 SAA2-SAA4A0A096LPE2 208 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms