RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 DLK1P80370 383 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 TMEM211Q6ICI0 200 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 LYZL2Q7Z4W2 148 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 CALHM1Q8IU99 346 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 SGPP2Q8IWX5 399 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 FAM169BQ8N8A8 192 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 MBD3L2Q8NHZ7 208 aaPredicted RBP9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 TAAR6Q96RI8 345 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 PLEKHA2Q9HB19 425 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 AK3Q9UIJ7 227 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 DLL1O00548 723 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 NGFP01138 241 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 FABP4P15090 132 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 RPS10P46783 165 aaKnown RBP9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 ERVS71-1P61550 626 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 IL24Q13007 206 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 UBE2V1Q13404 147 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 MPV17LQ2QL34 196 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 MKXQ8IYA7 352 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 C9orf106Q8NAJ2 232 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 OR1L6Q8NGR2 347 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 DYRK2Q92630 601 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 ABHD14AQ9BUJ0 271 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 ELOVL1Q9BW60 279 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 PLK3Q9H4B4 646 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 CRIM1Q9NZV1 1036 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 ANXA10Q9UJ72 324 aa9.83□□□□□ -0.84
SNRNP200-208ENST00000497539 LIPFP07098 398 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 RPS20P60866 119 aaKnown RBP9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 CCL20P78556 96 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 PHLDA2Q53GA4 152 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 SHISA2Q6UWI4 295 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 TMEM182Q6ZP80 229 aaPredicted RBP9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 SLC35E3Q7Z769 313 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 FBXL14Q8N1E6 418 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 ZNF610Q8N9Z0 462 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 LYPD6BQ8NI32 183 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 FAM213BQ8TBF2 198 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 KCNJ16Q9NPI9 418 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 URGCP-MRPS24S4R325 110 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 CGAP01215 116 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 DANCRP0C864 163 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 CCL2P13500 99 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 FUT3P21217 361 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 PIGPP57054 158 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 TAF9Q16594 264 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 COL5A1-AS1Q5SY13 56 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 HIST1H2BLQ99880 126 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 SLC2A9Q9NRM0 540 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 DKK4Q9UBT3 224 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 ST3GAL6Q9Y274 331 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 KNTC1P50748 2209 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 SHANK1Q9Y566 2161 aa9.82□□□□□ -0.84
SNRNP200-208ENST00000497539 KIR2DL5BA0A0G2JN68 375 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 KIR2DL5BA0A0G2JPC4 375 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 ANKRD30BLA7E2S9 258 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 SLC33A1O00400 549 aaPredicted RBP9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 GEMIN2O14893 280 aaKnown RBP9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 OR2C1O95371 312 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 TOMM40O96008 361 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 IGKV3-15P01624 115 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 GAPDHP04406 335 aaKnown RBP9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 OR5AC1P0C628 307 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 COMPP49747 757 aaPredicted RBP9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 IL13RA2Q14627 380 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 PIGYQ3MUY2 71 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 PDZD11Q5EBL8 140 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 C1orf194Q5T5A4 169 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 ZNF343Q6P1L6 599 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 KIR2DL5AQ8N109 375 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 POMT1Q9Y6A1 747 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 ZNF407Q9C0G0 2248 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 HIST1H2BKO60814 126 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 HIST1H2BJP06899 126 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 CTSDP07339 412 aaPredicted RBP9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 HIST1H2BOP23527 126 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 HIST1H2BBP33778 126 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 HIST1H2BDP58876 126 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 UBE2NP61088 152 aaKnown RBP9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 RPS23P62266 143 aaKnown RBP9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 HIST1H2BCP62807 126 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 GNG3P63215 75 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 PDCD1Q15116 288 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 HIST2H2BEQ16778 126 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 GFI1BQ5VTD9 330 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 SLC25A26Q70HW3 274 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 MED12LQ86YW9 2145 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 C1orf174Q8IYL3 243 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 WDR31Q8NA23 367 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 STXBP6Q8NFX7 210 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 SNIP1Q8TAD8 396 aaKnown RBP9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 HIST1H2BHQ93079 126 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 HIST1H2BNQ99877 126 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 HIST1H2BMQ99879 126 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 NECAP2Q9NVZ3 263 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 AURKAIP1Q9NWT8 199 aaPredicted RBP9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 PSG11Q9UQ72 335 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 FREM1Q5H8C1 2179 aa9.81□□□□□ -0.84
SNRNP200-208ENST00000497539 TRBV6-6A0A0A6YYG2 114 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms