RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 KIFC1Q9BW19 673 aa2.29□□□□□ -2.04
VPS36-206ENST00000497149 COA1Q9GZY4 146 aa2.29□□□□□ -2.04
VPS36-206ENST00000497149 PRORYQ9H606 182 aa2.29□□□□□ -2.04
VPS36-206ENST00000497149 FAM60AQ9NP50 221 aa2.29□□□□□ -2.04
VPS36-206ENST00000497149 TMEM138Q9NPI0 162 aa2.29□□□□□ -2.04
VPS36-206ENST00000497149 BIN3Q9NQY0 253 aa2.29□□□□□ -2.04
VPS36-206ENST00000497149 SPANXCQ9NY87 97 aa2.29□□□□□ -2.04
VPS36-206ENST00000497149 DNAJC27Q9NZQ0 273 aa2.29□□□□□ -2.04
VPS36-206ENST00000497149 ZNF492Q9P255 531 aa2.29□□□□□ -2.04
VPS36-206ENST00000497149 OR52A1Q9UKL2 312 aa2.29□□□□□ -2.04
VPS36-206ENST00000497149 KLF13Q9Y2Y9 288 aaPredicted RBP2.29□□□□□ -2.04
VPS36-206ENST00000497149 ZSWIM8A7E2V4 1837 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 PBRM1Q86U86 1689 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 LTBP4Q8N2S1 1624 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 NUP155O75694 1391 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 SMIM9A6NGZ8 99 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 CLDN24A6NM45 220 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 C4orf51C9J302 202 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 F8W036 122 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 UPK1AO00322 258 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 KPNA4O00629 521 aaPredicted RBP2.28□□□□□ -2.04
VPS36-206ENST00000497149 PHYHO14832 338 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 KCNK2O95069 426 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 PPBPP02775 128 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 OR10J4P0C629 311 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 LIPCP11150 499 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 OGNP20774 298 aaKnown RBP2.28□□□□□ -2.04
VPS36-206ENST00000497149 HIST1H1TP22492 207 aaPredicted RBP2.28□□□□□ -2.04
VPS36-206ENST00000497149 PSMB9P28065 219 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 ADORA1P30542 326 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 PYCR1P32322 319 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 CLDN12P56749 244 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 OR10A3P58181 314 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 SNAP25P60880 206 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 CDC42P60953 191 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 PSPHP78330 225 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 IL5RAQ01344 420 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 HLA-DRB5Q30154 266 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 LIN52Q52LA3 116 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 ELP2Q6IA86 826 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 RPL13AP3Q6NVV1 102 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 FAM231DQ6ZW35 169 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 OLIG3Q7RTU3 272 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 PRNTQ86SH4 94 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 LINC00337Q8N6G1 96 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 ZDHHC22Q8N966 263 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 ZFP62Q8NB50 900 aaPredicted RBP2.28□□□□□ -2.04
VPS36-206ENST00000497149 MCFD2Q8NI22 146 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 YIPF5Q969M3 257 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 DDIT4LQ96D03 193 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 METTL26Q96S19 204 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 SIGMAR1Q99720 223 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 TM2D3Q9BRN9 247 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 TXNIPQ9H3M7 391 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 VSIRQ9H7M9 311 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 TP53TG1Q9Y2A0 90 aa2.28□□□□□ -2.04
VPS36-206ENST00000497149 ERCC6Q03468 1493 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 OR6C6A6NF89 314 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 SLC17A3O00476 420 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 HAND1O96004 215 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 MT-CO2P00403 227 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 IGLV6-57P01721 117 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 CD8AP01732 235 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 IGHG2P01859 326 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 HRES1P13985 223 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 ATF1P18846 271 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 RPL12P30050 165 aaKnown RBP2.27□□□□□ -2.05
VPS36-206ENST00000497149 GRPRP30550 384 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 CA5AP35218 305 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 GCLMP48507 274 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 NUDT2P50583 147 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 RAB38P57729 211 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 TAS2R41P59536 307 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 HIST1H3AP68431 136 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 H3F3AP84243 136 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 OR2F1Q13607 317 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 ELOCQ15369 112 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 MRPL2Q5T653 305 aaKnown RBP2.27□□□□□ -2.05
VPS36-206ENST00000497149 SYT6Q5T7P8 510 aaPredicted RBP2.27□□□□□ -2.05
VPS36-206ENST00000497149 N4BP2L1Q5TBK1 243 aaPredicted RBP2.27□□□□□ -2.05
VPS36-206ENST00000497149 CLEC19AQ6UXS0 136 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 C4orf22Q6V702 233 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 RASSF6Q6ZTQ3 369 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 C3orf62Q6ZUJ4 267 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 HIST2H3AQ71DI3 136 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 FAM19A5Q7Z5A7 132 aaPredicted RBP2.27□□□□□ -2.05
VPS36-206ENST00000497149 GALNT10Q86SR1 603 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 ATPAF2Q8N5M1 289 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 LHFPL5Q8TAF8 219 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 RBPMSQ93062 196 aaKnown RBP2.27□□□□□ -2.05
VPS36-206ENST00000497149 SLC19A3Q9BZV2 496 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 MIXL1Q9H2W2 232 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 PARP11Q9NR21 331 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 TMEM38BQ9NVV0 291 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 RBM22Q9NW64 420 aaKnown RBP eCLIP2.27□□□□□ -2.05
VPS36-206ENST00000497149 DDIT4Q9NX09 232 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 DOK5Q9P104 306 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 C14orf166Q9Y224 244 aaKnown RBP2.27□□□□□ -2.05
VPS36-206ENST00000497149 ANGPT4Q9Y264 503 aa2.27□□□□□ -2.05
VPS36-206ENST00000497149 UFC1Q9Y3C8 167 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms