RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 HIST2H2BDQ6DRA6 164 aa7.85□□□□□ -1.15
CALD1-223ENST00000496024 ODF3L1Q8IXM7 274 aa7.85□□□□□ -1.15
CALD1-223ENST00000496024 OR10J5Q8NHC4 309 aa7.85□□□□□ -1.15
CALD1-223ENST00000496024 WFDC12Q8WWY7 111 aa7.85□□□□□ -1.15
CALD1-223ENST00000496024 EDARADDQ8WWZ3 215 aa7.85□□□□□ -1.15
CALD1-223ENST00000496024 S100A16Q96FQ6 103 aaKnown RBP7.85□□□□□ -1.15
CALD1-223ENST00000496024 AKR1E2Q96JD6 320 aa7.85□□□□□ -1.15
CALD1-223ENST00000496024 RBM14Q96PK6 669 aaKnown RBP7.85□□□□□ -1.15
CALD1-223ENST00000496024 GINS4Q9BRT9 223 aa7.85□□□□□ -1.15
CALD1-223ENST00000496024 MRPL20Q9BYC9 149 aaKnown RBP7.85□□□□□ -1.15
CALD1-223ENST00000496024 IFI27L2Q9H2X8 130 aa7.85□□□□□ -1.15
CALD1-223ENST00000496024 RANBP3Q9H6Z4 567 aaPredicted RBP7.85□□□□□ -1.15
CALD1-223ENST00000496024 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.85□□□□□ -1.15
CALD1-223ENST00000496024 TRRAPQ9Y4A5 3859 aa7.85□□□□□ -1.15
CALD1-223ENST00000496024 CMYA5Q8N3K9 4069 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 A0A0A6YYH2 397 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 A6NJ64 397 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 RAB29O14966 203 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 LANCL1O43813 399 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 HPGDSO60760 199 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 TMEM127O75204 238 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 PEX14O75381 377 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 EIF4EP06730 217 aaKnown RBP7.84□□□□□ -1.15
CALD1-223ENST00000496024 OR8U9P0C7N5 309 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 GPR12P47775 334 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 PROK1P58294 105 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 KRTAP10-3P60369 221 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 PITPNAQ00169 270 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 SPCS2Q15005 226 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 LY6G6FQ5SQ64 297 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 TMEM69Q5SWH9 247 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 SHISA2Q6UWI4 295 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 C16orf82Q7Z2V1 217 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 THNSL2Q86YJ6 484 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 KLHDC1Q8N7A1 406 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 GVQW1Q8N7I0 195 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 C11orf44Q8N8P7 122 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 OR2T10Q8NGZ9 312 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 OR8U1Q8NH10 309 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 KCTD12Q96CX2 325 aaKnown RBP7.84□□□□□ -1.15
CALD1-223ENST00000496024 EAF1Q96JC9 268 aaPredicted RBP7.84□□□□□ -1.15
CALD1-223ENST00000496024 S1PR3Q99500 378 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 ABCG5Q9H222 651 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 AUNIPQ9H7T9 357 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 PIPOXQ9P0Z9 390 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 SCOCQ9UIL1 159 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 ZNF221Q9UK13 617 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 MRPS7Q9Y2R9 242 aaKnown RBP7.84□□□□□ -1.15
CALD1-223ENST00000496024 MOB4Q9Y3A3 225 aa7.84□□□□□ -1.15
CALD1-223ENST00000496024 RBM7Q9Y580 266 aaKnown RBP7.84□□□□□ -1.15
CALD1-223ENST00000496024 WNK1Q9H4A3 2382 aa7.83□□□□□ -1.16
CALD1-223ENST00000496024 TRBV6-7A0A0A0MS04 114 aa7.83□□□□□ -1.16
CALD1-223ENST00000496024 NCBP2LA6PVI3 153 aaKnown RBP7.83□□□□□ -1.16
CALD1-223ENST00000496024 FAM25AB3EWG3 89 aa7.83□□□□□ -1.16
CALD1-223ENST00000496024 FAM25CB3EWG5 89 aa7.83□□□□□ -1.16
CALD1-223ENST00000496024 FAM25GB3EWG6 89 aa7.83□□□□□ -1.16
CALD1-223ENST00000496024 TXNL1O43396 289 aa7.83□□□□□ -1.16
CALD1-223ENST00000496024 XRCC3O43542 346 aa7.83□□□□□ -1.16
CALD1-223ENST00000496024 NOL3O60936 208 aaKnown RBP7.83□□□□□ -1.16
CALD1-223ENST00000496024 MOSP00540 346 aa7.83□□□□□ -1.16
CALD1-223ENST00000496024 CD1BP29016 333 aa7.83□□□□□ -1.16
CALD1-223ENST00000496024 VDAC2P45880 294 aaPredicted RBP7.83□□□□□ -1.16
CALD1-223ENST00000496024 TAS2R20P59543 309 aa7.83□□□□□ -1.16
CALD1-223ENST00000496024 LSAMPQ13449 338 aa7.83□□□□□ -1.16
CALD1-223ENST00000496024 MZT2AQ6P582 158 aa7.83□□□□□ -1.16
CALD1-223ENST00000496024 GLDNQ6ZMI3 551 aaPredicted RBP7.83□□□□□ -1.16
CALD1-223ENST00000496024 ZNF833PQ6ZTB9 187 aa7.83□□□□□ -1.16
CALD1-223ENST00000496024 DRAXINQ8NBI3 349 aaPredicted RBP7.83□□□□□ -1.16
CALD1-223ENST00000496024 NABP2Q9BQ15 211 aa7.83□□□□□ -1.16
CALD1-223ENST00000496024 AGMATQ9BSE5 352 aa7.83□□□□□ -1.16
CALD1-223ENST00000496024 CABLES2Q9BTV7 478 aa7.83□□□□□ -1.16
CALD1-223ENST00000496024 SMIM31A0A1B0GVY4 71 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 CCDC160A6NGH7 325 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 M0QZK8 103 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 ITGB1BP1O14713 200 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 AMY1AP04745 511 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 AMY2AP04746 511 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 ZNF182P17025 639 aaPredicted RBP7.82□□□□□ -1.16
CALD1-223ENST00000496024 ELK1P19419 428 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 NFYAP23511 347 aaPredicted RBP7.82□□□□□ -1.16
CALD1-223ENST00000496024 TMBIM6P55061 237 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 LINC00205P59089 165 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 ARPC4P59998 168 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 EBI3Q14213 229 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 SRSF7Q16629 238 aaKnown RBP eCLIP7.82□□□□□ -1.16
CALD1-223ENST00000496024 CNIH2Q6PI25 160 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 FAM131AQ6UXB0 335 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 Q6ZS49 121 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 SNX29P2Q8IUI4 249 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 BEST4Q8NFU0 473 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 RAB2BQ8WUD1 216 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 ACOT12Q8WYK0 555 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 AP3S1Q92572 193 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 ZNF251Q9BRH9 671 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 OR2D2Q9H210 308 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 IFT46Q9NQC8 304 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 SERTAD4Q9NUC0 356 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 ANXA10Q9UJ72 324 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 PLXNB1O43157 2135 aa7.82□□□□□ -1.16
CALD1-223ENST00000496024 H7C2Y5 167 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms