RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 BEST4Q8NFU0 473 aa15.58■□□□□ 0.08
HDAC4-212ENST00000495497 AGMATQ9BSE5 352 aa15.58■□□□□ 0.08
HDAC4-212ENST00000495497 DCUN1D5Q9BTE7 237 aa15.58■□□□□ 0.08
HDAC4-212ENST00000495497 SLIRPQ9GZT3 109 aaKnown RBP15.58■□□□□ 0.08
HDAC4-212ENST00000495497 EXTL2Q9UBQ6 330 aa15.58■□□□□ 0.08
HDAC4-212ENST00000495497 ANXA10Q9UJ72 324 aa15.58■□□□□ 0.08
HDAC4-212ENST00000495497 FAM90A9PA6NNJ1 464 aa15.57■□□□□ 0.08
HDAC4-212ENST00000495497 ZNF736B4DX44 427 aaPredicted RBP15.57■□□□□ 0.08
HDAC4-212ENST00000495497 PRSS3P35030 304 aa15.57■□□□□ 0.08
HDAC4-212ENST00000495497 Q6ZSV7 163 aa15.57■□□□□ 0.08
HDAC4-212ENST00000495497 EDARADDQ8WWZ3 215 aa15.57■□□□□ 0.08
HDAC4-212ENST00000495497 GINS4Q9BRT9 223 aa15.57■□□□□ 0.08
HDAC4-212ENST00000495497 C6orf62Q9GZU0 229 aaPredicted RBP15.57■□□□□ 0.08
HDAC4-212ENST00000495497 TOLLIPQ9H0E2 274 aa15.57■□□□□ 0.08
HDAC4-212ENST00000495497 PITPNC1Q9UKF7 332 aa15.57■□□□□ 0.08
HDAC4-212ENST00000495497 DPPA5A6NC42 116 aa15.56■□□□□ 0.08
HDAC4-212ENST00000495497 J3QRK9 145 aa15.56■□□□□ 0.08
HDAC4-212ENST00000495497 ITGB1BP1O14713 200 aa15.56■□□□□ 0.08
HDAC4-212ENST00000495497 LANCL1O43813 399 aa15.56■□□□□ 0.08
HDAC4-212ENST00000495497 OR8U9P0C7N5 309 aa15.56■□□□□ 0.08
HDAC4-212ENST00000495497 RAG2P55895 527 aa15.56■□□□□ 0.08
HDAC4-212ENST00000495497 HES1Q14469 280 aa15.56■□□□□ 0.08
HDAC4-212ENST00000495497 HNF4GQ14541 408 aa15.56■□□□□ 0.08
HDAC4-212ENST00000495497 CNIH2Q6PI25 160 aa15.56■□□□□ 0.08
HDAC4-212ENST00000495497 ZNF833PQ6ZTB9 187 aa15.56■□□□□ 0.08
HDAC4-212ENST00000495497 H1FOOQ8IZA3 346 aaPredicted RBP15.56■□□□□ 0.08
HDAC4-212ENST00000495497 OR8U1Q8NH10 309 aa15.56■□□□□ 0.08
HDAC4-212ENST00000495497 SNAPC3Q92966 411 aa15.56■□□□□ 0.08
HDAC4-212ENST00000495497 ZNF251Q9BRH9 671 aa15.56■□□□□ 0.08
HDAC4-212ENST00000495497 MRPL20Q9BYC9 149 aaKnown RBP15.56■□□□□ 0.08
HDAC4-212ENST00000495497 IFT46Q9NQC8 304 aa15.56■□□□□ 0.08
HDAC4-212ENST00000495497 IGKV1D-33P01593 117 aa15.55■□□□□ 0.08
HDAC4-212ENST00000495497 IGKV1-33P01594 117 aa15.55■□□□□ 0.08
HDAC4-212ENST00000495497 MDKP21741 143 aaPredicted RBP15.55■□□□□ 0.08
HDAC4-212ENST00000495497 NFYAP23511 347 aaPredicted RBP15.55■□□□□ 0.08
HDAC4-212ENST00000495497 CBX5P45973 191 aa15.55■□□□□ 0.08
HDAC4-212ENST00000495497 ARPC4P59998 168 aa15.55■□□□□ 0.08
HDAC4-212ENST00000495497 RPL15P61313 204 aaKnown RBP15.55■□□□□ 0.08
HDAC4-212ENST00000495497 RNASE12Q5GAN4 147 aaKnown RBP15.55■□□□□ 0.08
HDAC4-212ENST00000495497 LIAT1Q6ZQX7 453 aa15.55■□□□□ 0.08
HDAC4-212ENST00000495497 MCFD2Q8NI22 146 aa15.55■□□□□ 0.08
HDAC4-212ENST00000495497 PIPOXQ9P0Z9 390 aa15.55■□□□□ 0.08
HDAC4-212ENST00000495497 COL6A5A8TX70 2615 aa15.54■□□□□ 0.08
HDAC4-212ENST00000495497 ZNF701M0R085 212 aaPredicted RBP15.54■□□□□ 0.08
HDAC4-212ENST00000495497 RAB29O14966 203 aa15.54■□□□□ 0.08
HDAC4-212ENST00000495497 DIRAS3O95661 229 aa15.54■□□□□ 0.08
HDAC4-212ENST00000495497 FAM106CPP0CH98 169 aa15.54■□□□□ 0.08
HDAC4-212ENST00000495497 HABP2Q14520 560 aaPredicted RBP15.54■□□□□ 0.08
HDAC4-212ENST00000495497 AWAT1Q58HT5 328 aa15.54■□□□□ 0.08
HDAC4-212ENST00000495497 FOXB2Q5VYV0 432 aa15.54■□□□□ 0.08
HDAC4-212ENST00000495497 THNSL2Q86YJ6 484 aa15.54■□□□□ 0.08
HDAC4-212ENST00000495497 GPX8Q8TED1 209 aa15.54■□□□□ 0.08
HDAC4-212ENST00000495497 NABP2Q9BQ15 211 aa15.54■□□□□ 0.08
HDAC4-212ENST00000495497 SLC25A33Q9BSK2 321 aa15.54■□□□□ 0.08
HDAC4-212ENST00000495497 NXF2Q9GZY0 626 aaKnown RBP15.54■□□□□ 0.08
HDAC4-212ENST00000495497 RAB18Q9NP72 206 aa15.54■□□□□ 0.08
HDAC4-212ENST00000495497 TXNL1O43396 289 aa15.53■□□□□ 0.08
HDAC4-212ENST00000495497 PROP1O75360 226 aa15.53■□□□□ 0.08
HDAC4-212ENST00000495497 NDUFA7O95182 113 aa15.53■□□□□ 0.08
HDAC4-212ENST00000495497 LPLP06858 475 aa15.53■□□□□ 0.08
HDAC4-212ENST00000495497 CTXN2P0C2S0 81 aa15.53■□□□□ 0.08
HDAC4-212ENST00000495497 TMEM11P17152 192 aa15.53■□□□□ 0.08
HDAC4-212ENST00000495497 GPR12P47775 334 aa15.53■□□□□ 0.08
HDAC4-212ENST00000495497 FOXL1Q12952 345 aa15.53■□□□□ 0.08
HDAC4-212ENST00000495497 GLDNQ6ZMI3 551 aaPredicted RBP15.53■□□□□ 0.08
HDAC4-212ENST00000495497 RBM14Q96PK6 669 aaKnown RBP15.53■□□□□ 0.08
HDAC4-212ENST00000495497 ABHD1Q96SE0 405 aa15.53■□□□□ 0.08
HDAC4-212ENST00000495497 S1PR3Q99500 378 aa15.53■□□□□ 0.08
HDAC4-212ENST00000495497 OR2D2Q9H210 308 aa15.53■□□□□ 0.08
HDAC4-212ENST00000495497 ZNF221Q9UK13 617 aa15.53■□□□□ 0.08
HDAC4-212ENST00000495497 ANAPC10Q9UM13 185 aa15.53■□□□□ 0.08
HDAC4-212ENST00000495497 SIGLEC9Q9Y336 463 aa15.53■□□□□ 0.08
HDAC4-212ENST00000495497 RBM7Q9Y580 266 aaKnown RBP15.53■□□□□ 0.08
HDAC4-212ENST00000495497 ANK2Q01484 3957 aa15.52■□□□□ 0.08
HDAC4-212ENST00000495497 SH2D7A6NKC9 451 aaPredicted RBP15.52■□□□□ 0.08
HDAC4-212ENST00000495497 OR2F2O95006 317 aa15.52■□□□□ 0.08
HDAC4-212ENST00000495497 CT45A6P0DMU7 189 aa15.52■□□□□ 0.08
HDAC4-212ENST00000495497 CT45A5P0DMU8 189 aa15.52■□□□□ 0.08
HDAC4-212ENST00000495497 CT45A7P0DMV0 189 aa15.52■□□□□ 0.08
HDAC4-212ENST00000495497 CD1BP29016 333 aa15.52■□□□□ 0.08
HDAC4-212ENST00000495497 COMPP49747 757 aaPredicted RBP15.52■□□□□ 0.08
HDAC4-212ENST00000495497 LINC00205P59089 165 aa15.52■□□□□ 0.08
HDAC4-212ENST00000495497 BLCAPP62952 87 aa15.52■□□□□ 0.08
HDAC4-212ENST00000495497 LSAMPQ13449 338 aa15.52■□□□□ 0.08
HDAC4-212ENST00000495497 C12orf54Q6X4T0 127 aa15.52■□□□□ 0.08
HDAC4-212ENST00000495497 Q6ZS46 218 aa15.52■□□□□ 0.08
HDAC4-212ENST00000495497 DRAXINQ8NBI3 349 aaPredicted RBP15.52■□□□□ 0.08
HDAC4-212ENST00000495497 C5orf30Q96GV9 206 aa15.52■□□□□ 0.08
HDAC4-212ENST00000495497 DIRAS2Q96HU8 199 aa15.52■□□□□ 0.08
HDAC4-212ENST00000495497 EAF1Q96JC9 268 aaPredicted RBP15.52■□□□□ 0.08
HDAC4-212ENST00000495497 ADAM30Q9UKF2 790 aa15.52■□□□□ 0.08
HDAC4-212ENST00000495497 TSPAN9O75954 239 aa15.51■□□□□ 0.07
HDAC4-212ENST00000495497 PMP2P02689 132 aa15.51■□□□□ 0.07
HDAC4-212ENST00000495497 NAT1P18440 290 aa15.51■□□□□ 0.07
HDAC4-212ENST00000495497 EBI3Q14213 229 aa15.51■□□□□ 0.07
HDAC4-212ENST00000495497 OR5AP2Q8NGF4 316 aa15.51■□□□□ 0.07
HDAC4-212ENST00000495497 OR4F5Q8NH21 305 aa15.51■□□□□ 0.07
HDAC4-212ENST00000495497 LINC01006Q8NI28 216 aa15.51■□□□□ 0.07
HDAC4-212ENST00000495497 NPFFR1Q9GZQ6 430 aa15.51■□□□□ 0.07
HDAC4-212ENST00000495497 SCPEP1Q9HB40 452 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms