RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 CD7P09564 240 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 ARL14EPLP0DKL9 152 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 OR13C7P0DN81 318 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 SYT1P21579 422 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 NPPCP23582 126 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 AGTR1P30556 359 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 OPRM1P35372 400 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 OR1E2P47887 323 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 FGF12P61328 243 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 XKRXQ6PP77 449 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 GLT6D1Q7Z4J2 308 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 SELENOHQ8IZQ5 122 aaKnown RBP1.11□□□□□ -2.23
VPS50-219ENST00000495039 SLC35F6Q8N357 371 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 C17orf78Q8N4C9 275 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 ZNF283Q8N7M2 679 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 OR4X2Q8NGF9 303 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 FNDC9Q8TBE3 224 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 TNFAIP8L1Q8WVP5 186 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 ZNF625Q96I27 306 aaPredicted RBP1.11□□□□□ -2.23
VPS50-219ENST00000495039 ZNF426Q9BUY5 554 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 UBQLN4Q9NRR5 601 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 HHLA2Q9UM44 414 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.11□□□□□ -2.23
VPS50-219ENST00000495039 RTEL1-TNFRSF6BF6WH68 1400 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 NCKAP5O14513 1909 aa1.11□□□□□ -2.23
VPS50-219ENST00000495039 IGKV2-29A2NJV5 120 aaPredicted RBP1.1□□□□□ -2.23
VPS50-219ENST00000495039 ARRDC5A6NEK1 342 aa1.1□□□□□ -2.23
VPS50-219ENST00000495039 TMEM235A6NFC5 223 aa1.1□□□□□ -2.23
VPS50-219ENST00000495039 C11orf86A6NJI1 115 aa1.1□□□□□ -2.23
VPS50-219ENST00000495039 K7ERQ8 282 aa1.1□□□□□ -2.23
VPS50-219ENST00000495039 ASS1P00966 412 aaKnown RBP1.1□□□□□ -2.23
VPS50-219ENST00000495039 STC1P52823 247 aa1.1□□□□□ -2.23
VPS50-219ENST00000495039 HADHBP55084 474 aaKnown RBP1.1□□□□□ -2.23
VPS50-219ENST00000495039 AGTRAPQ6RW13 159 aa1.1□□□□□ -2.23
VPS50-219ENST00000495039 OR5AK3PQ8NH89 298 aa1.1□□□□□ -2.23
VPS50-219ENST00000495039 FGF13Q92913 245 aa1.1□□□□□ -2.23
VPS50-219ENST00000495039 TBX5Q99593 518 aa1.1□□□□□ -2.23
VPS50-219ENST00000495039 MIEN1Q9BRT3 115 aa1.1□□□□□ -2.23
VPS50-219ENST00000495039 ZNF471Q9BX82 626 aaPredicted RBP1.1□□□□□ -2.23
VPS50-219ENST00000495039 EIF5A2Q9GZV4 153 aaKnown RBP1.1□□□□□ -2.23
VPS50-219ENST00000495039 DENND4BO75064 1496 aaPredicted RBP1.1□□□□□ -2.23
VPS50-219ENST00000495039 DSCAML1Q8TD84 2053 aa1.09□□□□□ -2.23
VPS50-219ENST00000495039 IGHV3-15A0A0B4J1V0 119 aa1.09□□□□□ -2.23
VPS50-219ENST00000495039 C2orf74A8MZ97 194 aa1.09□□□□□ -2.23
VPS50-219ENST00000495039 J3QQQ9 107 aa1.09□□□□□ -2.23
VPS50-219ENST00000495039 GNRH2O43555 120 aa1.09□□□□□ -2.23
VPS50-219ENST00000495039 ARL6IP5O75915 188 aa1.09□□□□□ -2.23
VPS50-219ENST00000495039 BRI3O95415 125 aa1.09□□□□□ -2.23
VPS50-219ENST00000495039 PSMG1O95456 288 aa1.09□□□□□ -2.23
VPS50-219ENST00000495039 IGLV3-27P01718 113 aa1.09□□□□□ -2.23
VPS50-219ENST00000495039 HBZP02008 142 aa1.09□□□□□ -2.23
VPS50-219ENST00000495039 GPX1P07203 203 aa1.09□□□□□ -2.23
VPS50-219ENST00000495039 CFL1P23528 166 aaKnown RBP1.09□□□□□ -2.23
VPS50-219ENST00000495039 LINC00313P59037 77 aa1.09□□□□□ -2.23
VPS50-219ENST00000495039 TAS2R45P59539 299 aa1.09□□□□□ -2.23
VPS50-219ENST00000495039 RPL26P61254 145 aaKnown RBP1.09□□□□□ -2.23
VPS50-219ENST00000495039 ANGPT1Q15389 498 aa1.09□□□□□ -2.23
VPS50-219ENST00000495039 TBC1D28Q2M2D7 210 aa1.09□□□□□ -2.23
VPS50-219ENST00000495039 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.09□□□□□ -2.23
VPS50-219ENST00000495039 N4BP2L1Q5TBK1 243 aaPredicted RBP1.09□□□□□ -2.23
VPS50-219ENST00000495039 C2orf91Q6ZV80 131 aa1.09□□□□□ -2.23
VPS50-219ENST00000495039 PLCZ1Q86YW0 608 aa1.09□□□□□ -2.23
VPS50-219ENST00000495039 ACY3Q96HD9 319 aa1.09□□□□□ -2.23
VPS50-219ENST00000495039 TMEM208Q9BTX3 173 aa1.09□□□□□ -2.23
VPS50-219ENST00000495039 TREM1Q9NP99 234 aa1.09□□□□□ -2.23
VPS50-219ENST00000495039 RPL26L1Q9UNX3 145 aaKnown RBP1.09□□□□□ -2.23
VPS50-219ENST00000495039 PUS1Q9Y606 427 aaKnown RBP eCLIP1.09□□□□□ -2.23
VPS50-219ENST00000495039 CR1P17927 2039 aa1.09□□□□□ -2.24
VPS50-219ENST00000495039 NYNRINQ9P2P1 1898 aaKnown RBP1.09□□□□□ -2.24
VPS50-219ENST00000495039 LRPPRCP42704 1394 aaKnown RBP1.08□□□□□ -2.24
VPS50-219ENST00000495039 PLCH2O75038 1416 aa1.08□□□□□ -2.24
VPS50-219ENST00000495039 SLC17A3O00476 420 aa1.08□□□□□ -2.24
VPS50-219ENST00000495039 COPEO14579 308 aa1.08□□□□□ -2.24
VPS50-219ENST00000495039 F8A1P23610 371 aa1.08□□□□□ -2.24
VPS50-219ENST00000495039 PEBP1P30086 187 aaKnown RBP1.08□□□□□ -2.24
VPS50-219ENST00000495039 KDELR2P33947 212 aa1.08□□□□□ -2.24
VPS50-219ENST00000495039 HSPA9P38646 679 aaKnown RBP1.08□□□□□ -2.24
VPS50-219ENST00000495039 DAD1P61803 113 aa1.08□□□□□ -2.24
VPS50-219ENST00000495039 UAP1Q16222 522 aaPredicted RBP1.08□□□□□ -2.24
VPS50-219ENST00000495039 TPRXLQ17RH7 258 aa1.08□□□□□ -2.24
VPS50-219ENST00000495039 CLEC12BQ2HXU8 276 aa1.08□□□□□ -2.24
VPS50-219ENST00000495039 TMEM31Q5JXX7 168 aa1.08□□□□□ -2.24
VPS50-219ENST00000495039 CRLF3Q8IUI8 442 aa1.08□□□□□ -2.24
VPS50-219ENST00000495039 DEFB119Q8N690 84 aa1.08□□□□□ -2.24
VPS50-219ENST00000495039 ZNF563Q8TA94 476 aa1.08□□□□□ -2.24
VPS50-219ENST00000495039 LHFPL5Q8TAF8 219 aa1.08□□□□□ -2.24
VPS50-219ENST00000495039 ACBD6Q9BR61 282 aa1.08□□□□□ -2.24
VPS50-219ENST00000495039 MED10Q9BTT4 135 aa1.08□□□□□ -2.24
VPS50-219ENST00000495039 METTL9Q9H1A3 318 aa1.08□□□□□ -2.24
VPS50-219ENST00000495039 C1orf109Q9NX04 203 aa1.08□□□□□ -2.24
VPS50-219ENST00000495039 RGS12O14924 1447 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 DAPL1A0PJW8 107 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 OR5K4A6NMS3 321 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 OR11H12B2RN74 326 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 UBE2L6O14933 153 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 GSTZ1O43708 216 aaPredicted RBP1.07□□□□□ -2.24
VPS50-219ENST00000495039 CRYBA1P05813 215 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 CCL3P10147 92 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 CRYBB3P26998 211 aa1.07□□□□□ -2.24
VPS50-219ENST00000495039 CRATP43155 626 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms