RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 CDC34P49427 236 aaPredicted RBP4.07□□□□□ -1.76
PRKD3-210ENST00000494667 HERV-K104P61576 105 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 KRTAP27-1Q3LI81 207 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 ACSM6Q6P461 480 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 Q6ZSR6 202 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 GTF2H5Q6ZYL4 71 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 FAM57BQ71RH2 274 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 BAGE3Q86Y29 109 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 BAGE2Q86Y30 109 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 UEVLDQ8IX04 471 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 OR4F5Q8NH21 305 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 C16orf52Q8NHV5 167 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 RNF138Q8WVD3 245 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 CYYR1Q96J86 154 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 SCRT2Q9NQ03 307 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 NXT1Q9UKK6 140 aaKnown RBP4.07□□□□□ -1.76
PRKD3-210ENST00000494667 TRGV10A0A0A0MS01 117 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 ZNF850A8MQ14 1090 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 B4DGG1 531 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 H3BRM9 83 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 BNIP3LO60238 219 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 STATHP02808 62 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 CRYGCP07315 174 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 P0C879 139 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 PTGDSP41222 190 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 KRTDAPP60985 99 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 TSPO2Q5TGU0 170 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 CXCL17Q6UXB2 119 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 Q8N7P7 452 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 OR10G7Q8NGN6 311 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 BAHD1Q8TBE0 780 aaPredicted RBP4.07□□□□□ -1.76
PRKD3-210ENST00000494667 C18orf32Q8TCD1 76 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 FER1L6-AS2Q96M78 137 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 FGF22Q9HCT0 170 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 V9GYV3 84 aa4.07□□□□□ -1.76
PRKD3-210ENST00000494667 C17orf105B2RV13 164 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 C11orf94C9JXX5 98 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 M0R1X1 148 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 SYNGR2O43760 224 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 GOSR1O95249 250 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 TSPAN13O95857 204 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 NAPSAO96009 420 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 CEACAM5P06731 702 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 CD33P20138 364 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 OMGP23515 440 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 SUMO3P55854 103 aaPredicted RBP4.06□□□□□ -1.76
PRKD3-210ENST00000494667 SRSF6Q13247 344 aaKnown RBP4.06□□□□□ -1.76
PRKD3-210ENST00000494667 DAZAP2Q15038 168 aaPredicted RBP4.06□□□□□ -1.76
PRKD3-210ENST00000494667 PHLDA2Q53GA4 152 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 PRAMEF20Q5VT98 475 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 HLA-DQA1Q5Y7H0 255 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 TCF23Q7RTU1 214 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 C5orf17Q8NAS9 161 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 FAM222BQ8WU58 562 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 NEUROG1Q92886 237 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 OR6C1Q96RD1 312 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 LRRC61Q9BV99 259 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 TMEM147Q9BVK8 224 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 CLEC7AQ9BXN2 247 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 QTRT1Q9BXR0 403 aaKnown RBP4.06□□□□□ -1.76
PRKD3-210ENST00000494667 GPR27Q9NS67 375 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 TMED7-TICAM2A0A0A6YYA0 188 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 IGKV1D-43A0A0B4J1Z2 117 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 PSMB11A5LHX3 300 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 F2Z2F3 143 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 PDCD6O75340 191 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 SP9P0CG40 484 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 SRFP11831 508 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 COX5AP20674 150 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 SLC25A53Q5H9E4 307 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 AMMECR1LQ6DCA0 310 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 ZNF439Q8NDP4 499 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 OR1B1Q8NGR6 318 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 OR4C12Q96R67 309 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 GPER1Q99527 375 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 OSTCQ9NRP0 149 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 PNO1Q9NRX1 252 aaKnown RBP4.06□□□□□ -1.76
PRKD3-210ENST00000494667 UBE2J1Q9Y385 318 aaPredicted RBP4.06□□□□□ -1.76
PRKD3-210ENST00000494667 TRBV20OR9-2A0A075B6H5 130 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 SMIM27A0A1W2PRY6 76 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 FAM181BA6NEQ2 426 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 C9orf118A6NHY6 69 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 AQP7P3A6NL99 342 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 VAMP5O95183 116 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 GP1BBP13224 206 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 CBLN1P23435 193 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 AMTP48728 403 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 RAC3P60763 192 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 RPEL1Q2QD12 228 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 ZNF718Q3SXZ3 478 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 TMEM164Q5U3C3 297 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 FIGLAQ6QHK4 219 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 Q6ZVH6 145 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 H1FNTQ75WM6 255 aaPredicted RBP4.06□□□□□ -1.76
PRKD3-210ENST00000494667 LINC00346Q8IVM7 164 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 METTL27Q8N6F8 245 aaPredicted RBP4.06□□□□□ -1.76
PRKD3-210ENST00000494667 SARAFQ96BY9 339 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 HDHD3Q9BSH5 251 aaPredicted RBP4.06□□□□□ -1.76
PRKD3-210ENST00000494667 SIGLEC8Q9NYZ4 499 aa4.06□□□□□ -1.76
PRKD3-210ENST00000494667 INSL6Q9Y581 213 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms