RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 OPN1MWP04001 364 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 THBDP07204 575 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 SRP19P09132 144 aaKnown RBP8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 OPN1MW2P0DN77 364 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 OPN1MW3P0DN78 364 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 NKX2-1P43699 371 aaPredicted RBP8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 RBP2P50120 134 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 UBE2KP61086 200 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 PKIAP61925 76 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 VAMP2P63027 116 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 H3F3AP84243 136 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 SRYQ05066 204 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 UBE2V2Q15819 145 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 AKR1C8PQ5T2L2 129 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 TMEM42Q69YG0 159 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 LSRQ86X29 649 aaPredicted RBP8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 STX12Q86Y82 276 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 FOXRED2Q8IWF2 684 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 SAXO1Q8IYX7 474 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 OR2M3Q8NG83 312 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 OR2G3Q8NGZ4 309 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 FAM213BQ8TBF2 198 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 GTF3AQ92664 365 aaKnown RBP8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 SGK3Q96BR1 496 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 ZNF799Q96GE5 643 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 LYZL4Q96KX0 146 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 PSMG3Q9BT73 122 aaPredicted RBP8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 SF3B5Q9BWJ5 86 aaKnown RBP8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 TMEM222Q9H0R3 208 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 KLRF1Q9NZS2 232 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 AK3Q9UIJ7 227 aa8.97□□□□□ -0.97
PDLIM1-205ENST00000493949 PLCE1Q9P212 2302 aa8.96□□□□□ -0.97
PDLIM1-205ENST00000493949 IGHV4-30-2A0A087WSY4 118 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 A0A1W2PP11 408 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 A0A1W2PPE2 198 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 GJE1A6NN92 205 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 RER1O15258 196 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 IFNA1P01562 189 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 CST2P09228 141 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 CEACAM6P40199 344 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 RPS10P46783 165 aaKnown RBP8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 COMPP49747 757 aaPredicted RBP8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 FUT6P51993 359 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 MALLQ13021 153 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 ENDOGQ14249 297 aaKnown RBP8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 RNPS1Q15287 305 aaKnown RBP8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 ELOBQ15370 118 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 TAF9Q16594 264 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 NRN1LQ496H8 165 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 FAM27BQ5VT28 67 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 OTPQ5XKR4 325 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 VWA1Q6PCB0 445 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 TMEM182Q6ZP80 229 aaPredicted RBP8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 LINC00596Q86U02 117 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 GPR137CQ8N3F9 429 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 POC1BQ8TC44 478 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 RNASEH2CQ8TDP1 164 aaKnown RBP8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 EDARADDQ8WWZ3 215 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 RAB39BQ96DA2 213 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 SPACA5Q96QH8 159 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 SSX3Q99909 188 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 EMC6Q9BV81 110 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 SMIM3Q9BZL3 60 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 RIMS4Q9H426 269 aaPredicted RBP8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 METTL7AQ9H8H3 244 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 WFDC1Q9HC57 220 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 ZNF319Q9P2F9 582 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 PITPNC1Q9UKF7 332 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 PIGLQ9Y2B2 252 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 RCL1Q9Y2P8 373 aaKnown RBP8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 FBXO7Q9Y3I1 522 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 WSB1Q9Y6I7 421 aa8.96□□□□□ -0.98
PDLIM1-205ENST00000493949 KIR2DS1A0A191URI9 304 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 C3orf85A0A1B0GTC6 90 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 CLDN34H7C241 214 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 HSD17B6O14756 317 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 MPPED1O15442 326 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 DHHO43323 396 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 CYB5R3P00387 301 aaPredicted RBP8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 CGAP01215 116 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 SOD3P08294 240 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 CBR1P16152 277 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 VDAC1P21796 283 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 GABRR1P24046 479 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 ATP6V0CP27449 155 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 PTGDSP41222 190 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 KIR2DS4P43632 304 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 CLDN15P56746 228 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 TAS2R30P59541 319 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 OR2B8PP59922 312 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 HLA-DRB3P79483 266 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 HNF4GQ14541 408 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 KIR2DS1Q14954 304 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 KRTAP27-1Q3LI81 207 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 AKIRIN2Q53H80 203 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 CYB5R2Q6BCY4 276 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 SPSB3Q6PJ21 355 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 C6orf201Q7Z4U5 140 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 DPPA2Q7Z7J5 298 aa8.95□□□□□ -0.98
PDLIM1-205ENST00000493949 ZNF429Q86V71 674 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms