RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 GFI1Q99684 422 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 C20orf144Q9BQM9 153 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 NUDT16L1Q9BRJ7 211 aaKnown RBP6.88□□□□□ -1.31
HDAC6-234ENST00000493923 NIPSNAP3BQ9BS92 247 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 ATG101Q9BSB4 218 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 RNF126Q9BV68 326 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 OR2S2Q9NQN1 319 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 TAAR3PQ9P1P4 343 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 DUSP13Q9UII6 198 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 MGAM2Q2M2H8 2515 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 CMYA5Q8N3K9 4069 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 IGLV3-9A0A075B6K5 115 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 TRBV5-7A0A0A0MS05 114 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 MEGF11A6BM72 1044 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 TMEM212A6NML5 194 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 ZNF705GA8MUZ8 300 aaPredicted RBP6.87□□□□□ -1.31
HDAC6-234ENST00000493923 C9JQL5 133 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 H7C1C5 153 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 SLC17A2O00624 439 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 CCSO14618 274 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 AGPAT2O15120 278 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 PIN1P1O15428 100 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 IGHG1P01857 330 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 BMI1P35226 326 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 CLRN1P58418 232 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 LCN6P62502 163 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 PAX5Q02548 391 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 PPP1R1AQ13522 171 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 CRMP1Q14194 572 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 ACOT6Q3I5F7 207 aaPredicted RBP6.87□□□□□ -1.31
HDAC6-234ENST00000493923 C10orf128Q5T292 105 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 LINC01356Q8N9X3 169 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 TMEM104Q8NE00 496 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 Q8WTZ3 238 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 TMEM106AQ96A25 262 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 SEPSECSQ9HD40 501 aaKnown RBP6.87□□□□□ -1.31
HDAC6-234ENST00000493923 LYRM2Q9NU23 88 aaPredicted RBP6.87□□□□□ -1.31
HDAC6-234ENST00000493923 ZNF346Q9UL40 294 aaKnown RBP6.87□□□□□ -1.31
HDAC6-234ENST00000493923 GTF2A1LQ9UNN4 478 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 DYSFO75923 2080 aa6.87□□□□□ -1.31
HDAC6-234ENST00000493923 TANC2Q9HCD6 1990 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 TRRAPQ9Y4A5 3859 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 PKD1L1Q8TDX9 2849 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 TRAV27A0A087WT01 109 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 TRAV39A0A0B4J263 110 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 A0A0U1RQV5 110 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 C13orf42A0A1B0GVH6 325 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 A0A1W2PPK0 400 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 H3BQ15 152 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 CLDN34H7C241 214 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 CDC42EP2O14613 210 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 NXPH2O95156 264 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 VENTXO95231 258 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 SFT2D2O95562 160 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 NGFP01138 241 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 HBE1P02100 147 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 AMBPP02760 352 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 TRGC2P03986 189 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 HSPB1P04792 205 aaKnown RBP6.86□□□□□ -1.31
HDAC6-234ENST00000493923 IFNA6P05013 189 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 IL6RP08887 468 aaPredicted RBP6.86□□□□□ -1.31
HDAC6-234ENST00000493923 MRPL3P09001 348 aaKnown RBP6.86□□□□□ -1.31
HDAC6-234ENST00000493923 ZNF32P17041 273 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 ECI1P42126 302 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 GPR6P46095 362 aaPredicted RBP6.86□□□□□ -1.31
HDAC6-234ENST00000493923 CEBPGP53567 150 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 ARF6P62330 175 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 CCL8P80075 99 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 PSG4Q00888 419 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 ENDOGQ14249 297 aaKnown RBP6.86□□□□□ -1.31
HDAC6-234ENST00000493923 FAM189A2Q15884 450 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 ATP6V1FQ16864 119 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 TMEM128Q5BJH2 165 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 RPL7L1Q6DKI1 246 aaKnown RBP6.86□□□□□ -1.31
HDAC6-234ENST00000493923 KCTD9Q7L273 389 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 MRPL41Q8IXM3 137 aaKnown RBP6.86□□□□□ -1.31
HDAC6-234ENST00000493923 NUDT10Q8NFP7 164 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 OR56B2PQ8NGI1 322 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 OR8S1Q8NH09 359 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 ZNF519Q8TB69 540 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 LIPHQ8WWY8 451 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 RDH5Q92781 318 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 RBMXL1Q96E39 390 aaKnown RBP6.86□□□□□ -1.31
HDAC6-234ENST00000493923 SEH1LQ96EE3 360 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 POM121L2Q96KW2 1035 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 TECTBQ96PL2 329 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 MIEN1Q9BRT3 115 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 GINS3Q9BRX5 216 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 C20orf24Q9BUV8 137 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 SCRT1Q9BWW7 348 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 HCAR1Q9BXC0 346 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 TXNIPQ9H3M7 391 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 SRD5A3Q9H8P0 318 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 CDH20Q9HBT6 801 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 MSL2Q9HCI7 577 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 VSIG4Q9Y279 399 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 MED31Q9Y3C7 131 aa6.86□□□□□ -1.31
HDAC6-234ENST00000493923 PUS1Q9Y606 427 aaKnown RBP eCLIP6.86□□□□□ -1.31
HDAC6-234ENST00000493923 NKX6-3A6NJ46 265 aa6.85□□□□□ -1.31
HDAC6-234ENST00000493923 C17orf100A8MU93 164 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms