RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 IGKV1D-13A0A0B4J2D9 117 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 TCF21O43680 179 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 SSSCA1O60232 199 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 LINC00614P0C842 121 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 DANCRP0C864 163 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 PGA5P0DJD9 388 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 IGKV1-13P0DP09 117 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 TUBG1P23258 451 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 CD200P41217 278 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 P2RY1P47900 373 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 ODF1Q14990 250 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 RARRES2Q99969 163 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 TUBG2Q9NRH3 451 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 CACNA1DQ01668 2161 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 IFNA10P01566 189 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 GRPP07492 148 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 HIST1H1BP16401 226 aaKnown RBP11.64□□□□□ -0.55
VCP-207ENST00000493886 RND3P61587 244 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 PKIAP61925 76 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 HLA-DRB3P79483 266 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 PCSK4Q6UW60 755 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 ZNF818PQ6ZRF7 136 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 FAM24BQ8N5W8 94 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 R3HDM4Q96D70 268 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 OBP2BQ9NPH6 170 aa11.64□□□□□ -0.55
VCP-207ENST00000493886 PUS1Q9Y606 427 aaKnown RBP eCLIP11.64□□□□□ -0.55
VCP-207ENST00000493886 SIRPB1O00241 398 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 PPIHO43447 177 aaKnown RBP11.63□□□□□ -0.55
VCP-207ENST00000493886 CST7O76096 145 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 OR2H2O95918 312 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 EWSR1Q01844 656 aaKnown RBP eCLIP11.63□□□□□ -0.55
VCP-207ENST00000493886 P2RY6Q15077 328 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 BHLHA15Q7RTS1 189 aaPredicted RBP11.63□□□□□ -0.55
VCP-207ENST00000493886 TBC1D26Q86UD7 250 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 GAPTQ8N292 157 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 OR8G5Q8NG78 346 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 UBE2J1Q9Y385 318 aaPredicted RBP11.63□□□□□ -0.55
VCP-207ENST00000493886 MUC6Q6W4X9 2439 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 CFAP47Q6ZTR5 3102 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 IGLV1-44P01699 117 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 CEACAM8P31997 349 aaPredicted RBP11.63□□□□□ -0.55
VCP-207ENST00000493886 GNMTQ14749 295 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 ADAM5Q6NVV9 412 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 RBMXL3Q8N7X1 1067 aaKnown RBP11.63□□□□□ -0.55
VCP-207ENST00000493886 NUDT10Q8NFP7 164 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 OR10A7Q8NGE5 316 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 TMEM222Q9H0R3 208 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 CEP250Q9BV73 2442 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 K7EM74 188 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 ATXN7O15265 892 aaPredicted RBP11.63□□□□□ -0.55
VCP-207ENST00000493886 MLNRO43193 412 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 MDH2P40926 338 aaKnown RBP11.63□□□□□ -0.55
VCP-207ENST00000493886 SRPXP78539 464 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 CCL20P78556 96 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 CXorf66Q5JRM2 361 aaPredicted RBP11.63□□□□□ -0.55
VCP-207ENST00000493886 SNIP1Q8TAD8 396 aaKnown RBP11.63□□□□□ -0.55
VCP-207ENST00000493886 TNFRSF14Q92956 283 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 LRFN3Q9BTN0 628 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 CCL28Q9NRJ3 127 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 TMED3Q9Y3Q3 217 aa11.63□□□□□ -0.55
VCP-207ENST00000493886 GVINP1Q7Z2Y8 2422 aa11.62□□□□□ -0.55
VCP-207ENST00000493886 IGSF23A1L1A6 192 aa11.62□□□□□ -0.55
VCP-207ENST00000493886 HSD17B6O14756 317 aa11.62□□□□□ -0.55
VCP-207ENST00000493886 YIF1AO95070 293 aa11.62□□□□□ -0.55
VCP-207ENST00000493886 SEC11BP0C7V7 166 aa11.62□□□□□ -0.55
VCP-207ENST00000493886 RUNX1Q01196 453 aa11.62□□□□□ -0.55
VCP-207ENST00000493886 ZNF146Q15072 292 aa11.62□□□□□ -0.55
VCP-207ENST00000493886 PLPPR1Q8TBJ4 325 aa11.62□□□□□ -0.55
VCP-207ENST00000493886 GINS3Q9BRX5 216 aa11.62□□□□□ -0.55
VCP-207ENST00000493886 SCRT1Q9BWW7 348 aa11.62□□□□□ -0.55
VCP-207ENST00000493886 IGHV2OR16-5A0A0B4J2B6 119 aa11.62□□□□□ -0.55
VCP-207ENST00000493886 IGHV1-18A0A0C4DH31 117 aa11.62□□□□□ -0.55
VCP-207ENST00000493886 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.62□□□□□ -0.55
VCP-207ENST00000493886 OR5H1A6NKK0 313 aa11.62□□□□□ -0.55
VCP-207ENST00000493886 H3BP45 60 aa11.62□□□□□ -0.55
VCP-207ENST00000493886 ADAM20O43506 726 aa11.62□□□□□ -0.55
VCP-207ENST00000493886 THNSL2Q86YJ6 484 aa11.62□□□□□ -0.55
VCP-207ENST00000493886 LYPD6BQ8NI32 183 aa11.62□□□□□ -0.55
VCP-207ENST00000493886 CABLES2Q9BTV7 478 aa11.62□□□□□ -0.55
VCP-207ENST00000493886 GAL3ST2Q9H3Q3 398 aa11.62□□□□□ -0.55
VCP-207ENST00000493886 SEPSECSQ9HD40 501 aaKnown RBP11.62□□□□□ -0.55
VCP-207ENST00000493886 KCNJ16Q9NPI9 418 aa11.62□□□□□ -0.55
VCP-207ENST00000493886 FZR1Q9UM11 496 aa11.62□□□□□ -0.55
VCP-207ENST00000493886 SH2D1BO14796 132 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 TIMM8AO60220 97 aaPredicted RBP11.61□□□□□ -0.55
VCP-207ENST00000493886 FABP6P51161 128 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 ZNF324BQ6AW86 544 aaPredicted RBP11.61□□□□□ -0.55
VCP-207ENST00000493886 ZNF695Q8IW36 515 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 OR2C3Q8N628 320 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 C15orf54Q8N8G6 183 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 OR2G3Q8NGZ4 309 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 TMEM171Q8WVE6 324 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 TMEM56Q96MV1 263 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 CLEC5AQ9NY25 188 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 FAM215AQ9Y5M1 114 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 TMEM56-RWDD3S4R434 201 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 TRAV39A0A0B4J263 110 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 KITLGP21583 273 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 EPHA1P21709 976 aa11.61□□□□□ -0.55
VCP-207ENST00000493886 ATP6V0CP27449 155 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms