RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 PRR22Q8IZ63 422 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 ZPLD1Q8TCW7 415 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 DOK4Q8TEW6 326 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 RAB1CQ92928 201 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 BANF2Q9H503 90 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 MMP25Q9NPA2 562 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 TAAR3PQ9P1P4 343 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 TUBD1Q9UJT1 453 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 CEP192Q8TEP8 1941 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 ABCA7Q8IZY2 2146 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 A6NDN8 102 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 K7EP34 96 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 MPPED1O15442 326 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 UPK3AO75631 287 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 CA2P00918 260 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 CELA3BP08861 270 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 FABP2P12104 132 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 THBS3P49746 956 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 ARG2P78540 354 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 ANXA2RQ3ZCQ2 193 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 TMEM251Q8N6I4 163 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 OR4F17Q8NGA8 305 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 GALMQ96C23 342 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 WDR34Q96EX3 536 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 C4orf45Q96LM5 186 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 SIGLEC12Q96PQ1 595 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 SPACA5Q96QH8 159 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 CLEC7AQ9BXN2 247 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 GNB4Q9HAV0 340 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 HRASLS2Q9NWW9 162 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 CES1P1Q9UKY3 287 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 KCNS2Q9ULS6 477 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 EXPH5Q8NEV8 1989 aa5.9□□□□□ -1.47
VPS13B-205ENST00000493587 MUC3AQ02505 3323 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 MYO7AQ13402 2215 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 IGSF23A1L1A6 192 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 M0R2Z0 102 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 PHF1O43189 567 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-205ENST00000493587 SLC16A7O60669 478 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 PITX3O75364 302 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 ZNF324O75467 553 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-205ENST00000493587 UTS2O95399 124 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 MPC1LP0DKB6 136 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 SLC25A6P12236 298 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 HIST1H1DP16402 221 aaKnown RBP5.89□□□□□ -1.47
VPS13B-205ENST00000493587 EGR1P18146 543 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 GDF1P27539 372 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 CLDN17P56750 224 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 TAS2R46P59540 309 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 ZNF117Q03924 483 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 MEP1BQ16820 701 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 ACSF3Q4G176 576 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-205ENST00000493587 C19orf35Q6ZS72 473 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 ARHGEF39Q8N4T4 335 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 OR5D14Q8NGL3 314 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 CT55Q8WUE5 264 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 RAB1BQ9H0U4 201 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 UBTD1Q9HAC8 227 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 HEATR5BQ9P2D3 2071 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 HELTA6NFD8 242 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 PGPEP1LA6NFU8 196 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 SLC22A20A6NK97 555 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 ANKRD30BLA7E2S9 258 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 M0QXV9 152 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 CEACAM5P06731 702 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 ADIPOQQ15848 244 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 DOLPP1Q86YN1 238 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 TMEM252Q8N6L7 170 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 OR5A1Q8NGJ0 315 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 KCNS1Q96KK3 526 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 QTRT1Q9BXR0 403 aaKnown RBP5.89□□□□□ -1.47
VPS13B-205ENST00000493587 CLCF1Q9UBD9 225 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 JPT1Q9UK76 154 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 TP53TG3Q9ULZ0 132 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 MDC1Q14676 2089 aaKnown RBP5.89□□□□□ -1.47
VPS13B-205ENST00000493587 TRPM6Q9BX84 2022 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 A0A0G2JLM5 398 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 NPIPB15A6NHN6 443 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-205ENST00000493587 PLPP1O14494 284 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 TSPAN13O95857 204 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 ZNF728P0DKX0 622 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 GPR12P47775 334 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 LHX2P50458 406 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 HIST1H1AQ02539 215 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-205ENST00000493587 ATP5G2Q06055 141 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 MRPL2Q5T653 305 aaKnown RBP5.89□□□□□ -1.47
VPS13B-205ENST00000493587 ADAMTSL5Q6ZMM2 481 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 MARCH3Q86UD3 253 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 ZNF595Q8IYB9 648 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 ADAT3Q96EY9 351 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-205ENST00000493587 SH2D2AQ9NP31 389 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 PNRC2Q9NPJ4 139 aaKnown RBP5.89□□□□□ -1.47
VPS13B-205ENST00000493587 CRIM1Q9NZV1 1036 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 OR1A1Q9P1Q5 309 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 TMEM14AQ9Y6G1 99 aa5.89□□□□□ -1.47
VPS13B-205ENST00000493587 OR4C46A6NHA9 309 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 ATP1B2P14415 290 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-205ENST00000493587 PLAC9Q5JTB6 97 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 RFLNAQ6ZTI6 216 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 FAM57BQ71RH2 274 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms