RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 OR52L2PQ8NGH6 319 aa9.01□□□□□ -0.97
COL6A3-213ENST00000493475 KCNG3Q8TAE7 436 aa9.01□□□□□ -0.97
COL6A3-213ENST00000493475 MUC7Q8TAX7 377 aa9.01□□□□□ -0.97
COL6A3-213ENST00000493475 SETD6Q8TBK2 473 aa9.01□□□□□ -0.97
COL6A3-213ENST00000493475 FAM46BQ96A09 425 aa9.01□□□□□ -0.97
COL6A3-213ENST00000493475 ORAI1Q96D31 301 aa9.01□□□□□ -0.97
COL6A3-213ENST00000493475 PGLYRP3Q96LB9 341 aa9.01□□□□□ -0.97
COL6A3-213ENST00000493475 DERL3Q96Q80 235 aa9.01□□□□□ -0.97
COL6A3-213ENST00000493475 OR5B12Q96R08 314 aa9.01□□□□□ -0.97
COL6A3-213ENST00000493475 RNF5Q99942 180 aa9.01□□□□□ -0.97
COL6A3-213ENST00000493475 NABP2Q9BQ15 211 aa9.01□□□□□ -0.97
COL6A3-213ENST00000493475 TMEM59Q9BXS4 323 aa9.01□□□□□ -0.97
COL6A3-213ENST00000493475 SLA2Q9H6Q3 261 aa9.01□□□□□ -0.97
COL6A3-213ENST00000493475 GNB4Q9HAV0 340 aa9.01□□□□□ -0.97
COL6A3-213ENST00000493475 SAA2-SAA4A0A096LPE2 208 aa9□□□□□ -0.97
COL6A3-213ENST00000493475 IGHV7-81A0A0B4J1V7 117 aa9□□□□□ -0.97
COL6A3-213ENST00000493475 PNMA8CA0A1B0GUJ8 204 aa9□□□□□ -0.97
COL6A3-213ENST00000493475 G3V318 75 aa9□□□□□ -0.97
COL6A3-213ENST00000493475 EBAG9O00559 213 aa9□□□□□ -0.97
COL6A3-213ENST00000493475 RRHO14718 337 aa9□□□□□ -0.97
COL6A3-213ENST00000493475 SLC22A1O15245 554 aa9□□□□□ -0.97
COL6A3-213ENST00000493475 NDUFA3O95167 84 aa9□□□□□ -0.97
COL6A3-213ENST00000493475 BPNT1O95861 308 aa9□□□□□ -0.97
COL6A3-213ENST00000493475 LGALS1P09382 135 aaKnown RBP9□□□□□ -0.97
COL6A3-213ENST00000493475 SAA2P0DJI9 122 aaPredicted RBP9□□□□□ -0.97
COL6A3-213ENST00000493475 ZBTB25P24278 435 aa9□□□□□ -0.97
COL6A3-213ENST00000493475 VHLP40337 213 aa9□□□□□ -0.97
COL6A3-213ENST00000493475 MRPS15P82914 257 aaKnown RBP9□□□□□ -0.97
COL6A3-213ENST00000493475 ZFP41Q8N8Y5 198 aa9□□□□□ -0.97
COL6A3-213ENST00000493475 MINDY2Q8NBR6 621 aa9□□□□□ -0.97
COL6A3-213ENST00000493475 MRPL30Q8TCC3 161 aaKnown RBP9□□□□□ -0.97
COL6A3-213ENST00000493475 PHYHIPQ92561 330 aa9□□□□□ -0.97
COL6A3-213ENST00000493475 DCUN1D4Q92564 292 aa9□□□□□ -0.97
COL6A3-213ENST00000493475 TSNAXQ99598 290 aaKnown RBP9□□□□□ -0.97
COL6A3-213ENST00000493475 URM1Q9BTM9 101 aaKnown RBP9□□□□□ -0.97
COL6A3-213ENST00000493475 PLEKHJ1Q9NW61 149 aa9□□□□□ -0.97
COL6A3-213ENST00000493475 SLC23A1Q9UHI7 598 aa9□□□□□ -0.97
COL6A3-213ENST00000493475 CLEC2DQ9UHP7 191 aa9□□□□□ -0.97
COL6A3-213ENST00000493475 WASHC3Q9Y3C0 194 aa9□□□□□ -0.97
COL6A3-213ENST00000493475 MAGEA13PA6NCF6 341 aa8.99□□□□□ -0.97
COL6A3-213ENST00000493475 APOA2P02652 100 aa8.99□□□□□ -0.97
COL6A3-213ENST00000493475 HSPB1P04792 205 aaKnown RBP8.99□□□□□ -0.97
COL6A3-213ENST00000493475 TFAP2AP05549 437 aa8.99□□□□□ -0.97
COL6A3-213ENST00000493475 GP9P14770 177 aa8.99□□□□□ -0.97
COL6A3-213ENST00000493475 RPS11P62280 158 aaKnown RBP eCLIP8.99□□□□□ -0.97
COL6A3-213ENST00000493475 GNB1P62873 340 aa8.99□□□□□ -0.97
COL6A3-213ENST00000493475 GNMTQ14749 295 aa8.99□□□□□ -0.97
COL6A3-213ENST00000493475 HMGN3Q15651 99 aa8.99□□□□□ -0.97
COL6A3-213ENST00000493475 ACTBL2Q562R1 376 aa8.99□□□□□ -0.97
COL6A3-213ENST00000493475 RBM48Q5RL73 367 aaKnown RBP8.99□□□□□ -0.97
COL6A3-213ENST00000493475 FAM131AQ6UXB0 335 aa8.99□□□□□ -0.97
COL6A3-213ENST00000493475 ANKRD13BQ86YJ7 626 aa8.99□□□□□ -0.97
COL6A3-213ENST00000493475 RCHY1Q96PM5 261 aa8.99□□□□□ -0.97
COL6A3-213ENST00000493475 KLK15Q9H2R5 256 aa8.99□□□□□ -0.97
COL6A3-213ENST00000493475 ZNF221Q9UK13 617 aa8.99□□□□□ -0.97
COL6A3-213ENST00000493475 A3GALT2U3KPV4 340 aa8.99□□□□□ -0.97
COL6A3-213ENST00000493475 A0A0G2JLM5 398 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 C13orf42A0A1B0GVH6 325 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 ITGB1BP1O14713 200 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 SPDEFO95238 335 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 LALBAP00709 142 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 LYL1P12980 280 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 CPEP16870 476 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 ZP3P21754 424 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 OR3A3P47888 321 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 CRIP2P52943 208 aaPredicted RBP8.98□□□□□ -0.97
COL6A3-213ENST00000493475 TPPP2P59282 170 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 RPS27AP62979 156 aaKnown RBP8.98□□□□□ -0.97
COL6A3-213ENST00000493475 CX3CL1P78423 397 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 TATDN3Q17R31 274 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 LRRC36Q1X8D7 754 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 MOGAT2Q3SYC2 334 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 AKIRIN2Q53H80 203 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 FAM53AQ6NSI3 398 aaPredicted RBP8.98□□□□□ -0.97
COL6A3-213ENST00000493475 CD200R1LQ6Q8B3 271 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 UNQ5815/PRO19632Q6UWF5 114 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 PPP1R27Q86WC6 154 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 SGPP2Q8IWX5 399 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 GGHQ92820 318 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 MND1Q9BWT6 205 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 KRTAP4-8Q9BYQ9 185 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 TOLLIPQ9H0E2 274 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 IFI27L2Q9H2X8 130 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 FBXL15Q9H469 300 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 ZNF355PQ9NSJ1 428 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 STUB1Q9UNE7 303 aa8.98□□□□□ -0.97
COL6A3-213ENST00000493475 CNIH1O95406 144 aa8.97□□□□□ -0.97
COL6A3-213ENST00000493475 SPNP16150 400 aa8.97□□□□□ -0.97
COL6A3-213ENST00000493475 HTR2CP28335 458 aa8.97□□□□□ -0.97
COL6A3-213ENST00000493475 ACSM3Q53FZ2 586 aa8.97□□□□□ -0.97
COL6A3-213ENST00000493475 HSD17B12Q53GQ0 312 aa8.97□□□□□ -0.97
COL6A3-213ENST00000493475 ZNF562Q6V9R5 426 aa8.97□□□□□ -0.97
COL6A3-213ENST00000493475 AHSA2Q719I0 299 aa8.97□□□□□ -0.97
COL6A3-213ENST00000493475 LYPD6Q86Y78 171 aa8.97□□□□□ -0.97
COL6A3-213ENST00000493475 ODF3L1Q8IXM7 274 aa8.97□□□□□ -0.97
COL6A3-213ENST00000493475 OR6M1Q8NGM8 313 aa8.97□□□□□ -0.97
COL6A3-213ENST00000493475 ARPC1AQ92747 370 aa8.97□□□□□ -0.97
COL6A3-213ENST00000493475 DLX4Q92988 240 aaPredicted RBP8.97□□□□□ -0.97
COL6A3-213ENST00000493475 TMEM68Q96MH6 324 aa8.97□□□□□ -0.97
COL6A3-213ENST00000493475 FAAP24Q9BTP7 215 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms