RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 SVOPQ8N4V2 548 aa9.73□□□□□ -0.85
COL6A1-205ENST00000492851 OR1N2Q8NGR9 330 aa9.73□□□□□ -0.85
COL6A1-205ENST00000492851 MYOZ3Q8TDC0 251 aa9.73□□□□□ -0.85
COL6A1-205ENST00000492851 MRPL20Q9BYC9 149 aaKnown RBP9.73□□□□□ -0.85
COL6A1-205ENST00000492851 ANKRD60Q9BZ19 345 aa9.73□□□□□ -0.85
COL6A1-205ENST00000492851 ISYNA1Q9NPH2 558 aa9.73□□□□□ -0.85
COL6A1-205ENST00000492851 HSF4Q9ULV5 492 aa9.73□□□□□ -0.85
COL6A1-205ENST00000492851 IGHV7-81A0A0B4J1V7 117 aa9.72□□□□□ -0.85
COL6A1-205ENST00000492851 NDUFA3O95167 84 aa9.72□□□□□ -0.85
COL6A1-205ENST00000492851 GSTP1P09211 210 aaKnown RBP9.72□□□□□ -0.85
COL6A1-205ENST00000492851 OR3A3P47888 321 aa9.72□□□□□ -0.85
COL6A1-205ENST00000492851 RAB9AP51151 201 aa9.72□□□□□ -0.85
COL6A1-205ENST00000492851 QRFPP83859 136 aa9.72□□□□□ -0.85
COL6A1-205ENST00000492851 ZNF616Q08AN1 781 aa9.72□□□□□ -0.85
COL6A1-205ENST00000492851 DEFB136Q30KP8 78 aa9.72□□□□□ -0.85
COL6A1-205ENST00000492851 PYHIN1Q6K0P9 492 aa9.72□□□□□ -0.85
COL6A1-205ENST00000492851 FAM89BQ8N5H3 189 aa9.72□□□□□ -0.85
COL6A1-205ENST00000492851 ZNF491Q8N8L2 437 aa9.72□□□□□ -0.85
COL6A1-205ENST00000492851 SETD6Q8TBK2 473 aa9.72□□□□□ -0.85
COL6A1-205ENST00000492851 WWC2-AS2Q96NR7 200 aa9.72□□□□□ -0.85
COL6A1-205ENST00000492851 PLGRKTQ9HBL7 147 aa9.72□□□□□ -0.85
COL6A1-205ENST00000492851 PARP11Q9NR21 331 aa9.72□□□□□ -0.85
COL6A1-205ENST00000492851 LSM2Q9Y333 95 aaKnown RBP9.72□□□□□ -0.85
COL6A1-205ENST00000492851 WSB1Q9Y6I7 421 aa9.72□□□□□ -0.85
COL6A1-205ENST00000492851 H7C2Y5 167 aa9.71□□□□□ -0.86
COL6A1-205ENST00000492851 ARPC1BO15143 372 aaKnown RBP9.71□□□□□ -0.86
COL6A1-205ENST00000492851 ATP6V0E1O15342 81 aa9.71□□□□□ -0.86
COL6A1-205ENST00000492851 HSPA12AO43301 675 aa9.71□□□□□ -0.86
COL6A1-205ENST00000492851 CEACAM6P40199 344 aa9.71□□□□□ -0.86
COL6A1-205ENST00000492851 ECI1P42126 302 aa9.71□□□□□ -0.86
COL6A1-205ENST00000492851 UNC119Q13432 240 aa9.71□□□□□ -0.86
COL6A1-205ENST00000492851 TPBGQ13641 420 aa9.71□□□□□ -0.86
COL6A1-205ENST00000492851 INSL4Q14641 139 aa9.71□□□□□ -0.86
COL6A1-205ENST00000492851 PLGLAQ15195 96 aa9.71□□□□□ -0.86
COL6A1-205ENST00000492851 ZNF260Q3ZCT1 412 aa9.71□□□□□ -0.86
COL6A1-205ENST00000492851 FAM27D1Q5T7N8 215 aa9.71□□□□□ -0.86
COL6A1-205ENST00000492851 LIPKQ5VXJ0 399 aa9.71□□□□□ -0.86
COL6A1-205ENST00000492851 ZNF429Q86V71 674 aa9.71□□□□□ -0.86
COL6A1-205ENST00000492851 MINDY2Q8NBR6 621 aa9.71□□□□□ -0.86
COL6A1-205ENST00000492851 PTX4Q96A99 478 aa9.71□□□□□ -0.86
COL6A1-205ENST00000492851 RITA1Q96K30 269 aa9.71□□□□□ -0.86
COL6A1-205ENST00000492851 CENPOQ9BU64 300 aa9.71□□□□□ -0.86
COL6A1-205ENST00000492851 IFI27L2Q9H2X8 130 aa9.71□□□□□ -0.86
COL6A1-205ENST00000492851 SCOCQ9UIL1 159 aa9.71□□□□□ -0.86
COL6A1-205ENST00000492851 WASHC3Q9Y3C0 194 aa9.71□□□□□ -0.86
COL6A1-205ENST00000492851 G3V318 75 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 I3L521 148 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 SLC17A2O00624 439 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 RRHO14718 337 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 ST8SIA5O15466 376 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 HSMCR30P0CW71 290 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 CT45A6P0DMU7 189 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 CT45A5P0DMU8 189 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 CT45A7P0DMV0 189 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 SERPINB10P48595 397 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 LUMP51884 338 aaPredicted RBP9.7□□□□□ -0.86
COL6A1-205ENST00000492851 CRIP2P52943 208 aaPredicted RBP9.7□□□□□ -0.86
COL6A1-205ENST00000492851 KIAA0141Q14154 515 aaPredicted RBP9.7□□□□□ -0.86
COL6A1-205ENST00000492851 IRF3Q14653 427 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 RAB11BQ15907 218 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 AKIRIN2Q53H80 203 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 CD200R1LQ6Q8B3 271 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 OR56B1Q8NGI3 324 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 OR5AN1Q8NGI8 311 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 TSNAXQ99598 290 aaKnown RBP9.7□□□□□ -0.86
COL6A1-205ENST00000492851 AGMATQ9BSE5 352 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 NICN1Q9BSH3 213 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 LPAR5Q9H1C0 372 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 KLK15Q9H2R5 256 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 DUSP21Q9H596 190 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 ACOT13Q9NPJ3 140 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 C12orf4Q9NQ89 552 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 ZNF221Q9UK13 617 aa9.7□□□□□ -0.86
COL6A1-205ENST00000492851 FOXA2Q9Y261 457 aaPredicted RBP9.7□□□□□ -0.86
COL6A1-205ENST00000492851 ZNF256Q9Y2P7 627 aaPredicted RBP9.7□□□□□ -0.86
COL6A1-205ENST00000492851 LSM4Q9Y4Z0 139 aaKnown RBP9.7□□□□□ -0.86
COL6A1-205ENST00000492851 RGS10O43665 173 aa9.69□□□□□ -0.86
COL6A1-205ENST00000492851 CNTFRP26992 372 aa9.69□□□□□ -0.86
COL6A1-205ENST00000492851 CX3CL1P78423 397 aa9.69□□□□□ -0.86
COL6A1-205ENST00000492851 HLA-DRB3P79483 266 aa9.69□□□□□ -0.86
COL6A1-205ENST00000492851 MRPS15P82914 257 aaKnown RBP9.69□□□□□ -0.86
COL6A1-205ENST00000492851 MLLT11Q13015 90 aaPredicted RBP9.69□□□□□ -0.86
COL6A1-205ENST00000492851 C11orf87Q6NUJ2 197 aa9.69□□□□□ -0.86
COL6A1-205ENST00000492851 FAM131AQ6UXB0 335 aa9.69□□□□□ -0.86
COL6A1-205ENST00000492851 ZNF562Q6V9R5 426 aa9.69□□□□□ -0.86
COL6A1-205ENST00000492851 TMEM203Q969S6 136 aa9.69□□□□□ -0.86
COL6A1-205ENST00000492851 C11orf54Q9H0W9 315 aaPredicted RBP9.69□□□□□ -0.86
COL6A1-205ENST00000492851 VCX3BQ9H321 246 aa9.69□□□□□ -0.86
COL6A1-205ENST00000492851 SLA2Q9H6Q3 261 aa9.69□□□□□ -0.86
COL6A1-205ENST00000492851 AK3Q9UIJ7 227 aa9.69□□□□□ -0.86
COL6A1-205ENST00000492851 A0A1W2PN81 502 aa9.68□□□□□ -0.86
COL6A1-205ENST00000492851 TRDCB7Z8K6 153 aa9.68□□□□□ -0.86
COL6A1-205ENST00000492851 H0YJW9 148 aa9.68□□□□□ -0.86
COL6A1-205ENST00000492851 OVOL1O14753 267 aa9.68□□□□□ -0.86
COL6A1-205ENST00000492851 SOCS1O15524 211 aa9.68□□□□□ -0.86
COL6A1-205ENST00000492851 SPDEFO95238 335 aa9.68□□□□□ -0.86
COL6A1-205ENST00000492851 CPEP16870 476 aa9.68□□□□□ -0.86
COL6A1-205ENST00000492851 CHRNA7P36544 502 aa9.68□□□□□ -0.86
COL6A1-205ENST00000492851 TAGLNQ01995 201 aaKnown RBP9.68□□□□□ -0.86
COL6A1-205ENST00000492851 ACTBL2Q562R1 376 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms