RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 ZNF616Q08AN1 781 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 PLGLAQ15195 96 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 MED22Q15528 200 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 ZNF880Q6PDB4 577 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 C18orf65Q6ZTR6 163 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 CEACAM19Q7Z692 300 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 LRRTM1Q86UE6 522 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 ZNF429Q86V71 674 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 ODF3L1Q8IXM7 274 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 SVOPQ8N4V2 548 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 ZNF491Q8N8L2 437 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 OR11H1Q8NG94 326 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 IL1F10Q8WWZ1 152 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 SULT4A1Q9BR01 284 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 TMED9Q9BVK6 235 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 MRPL20Q9BYC9 149 aaKnown RBP6.84□□□□□ -1.31
NUP50-217ENST00000491860 PARP11Q9NR21 331 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 SORL1Q92673 2214 aa6.84□□□□□ -1.32
NUP50-217ENST00000491860 PTGES3LE9PB15 166 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 SLC17A2O00624 439 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 ATP6V0E1O15342 81 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 IGLV1-40P01703 118 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 GSTP1P09211 210 aaKnown RBP6.83□□□□□ -1.32
NUP50-217ENST00000491860 SERPINB10P48595 397 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 RAB9AP51151 201 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 GNMTQ14749 295 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 DEFB136Q30KP8 78 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 FAM27D1Q5T7N8 215 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 LAIR2Q6ISS4 152 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 C6orf201Q7Z4U5 140 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 MINDY2Q8NBR6 621 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.83□□□□□ -1.32
NUP50-217ENST00000491860 OR56B1Q8NGI3 324 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 OR1N2Q8NGR9 330 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 SETD6Q8TBK2 473 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 DUX3Q96PT4 197 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 TSNAXQ99598 290 aaKnown RBP6.83□□□□□ -1.32
NUP50-217ENST00000491860 FAAP24Q9BTP7 215 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 ANKRD60Q9BZ19 345 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 IFI27L2Q9H2X8 130 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 VCX3BQ9H321 246 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 PLGRKTQ9HBL7 147 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 C12orf4Q9NQ89 552 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 FOXA2Q9Y261 457 aaPredicted RBP6.83□□□□□ -1.32
NUP50-217ENST00000491860 ZNF256Q9Y2P7 627 aaPredicted RBP6.83□□□□□ -1.32
NUP50-217ENST00000491860 WASHC3Q9Y3C0 194 aa6.83□□□□□ -1.32
NUP50-217ENST00000491860 IGHV7-81A0A0B4J1V7 117 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 LINC01619G3V211 115 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 H7C2Y5 167 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 I3L521 148 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 RRHO14718 337 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 RGS10O43665 173 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 DIRAS3O95661 229 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 APOA2P02652 100 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 CEACAM6P40199 344 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 ECI1P42126 302 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 OR3A3P47888 321 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 HLA-DRB3P79483 266 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 TAGLNQ01995 201 aaKnown RBP6.82□□□□□ -1.32
NUP50-217ENST00000491860 MLLT11Q13015 90 aaPredicted RBP6.82□□□□□ -1.32
NUP50-217ENST00000491860 CBX3Q13185 183 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 UNC119Q13432 240 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 TPBGQ13641 420 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 P2RY14Q15391 338 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 RAB11BQ15907 218 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 ZNF260Q3ZCT1 412 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 AKIRIN2Q53H80 203 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 FAM53AQ6NSI3 398 aaPredicted RBP6.82□□□□□ -1.32
NUP50-217ENST00000491860 CD200R1LQ6Q8B3 271 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 FAM131AQ6UXB0 335 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 FAM89BQ8N5H3 189 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 OR5AN1Q8NGI8 311 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 PTX4Q96A99 478 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 FLYWCH2Q96CP2 140 aaKnown RBP6.82□□□□□ -1.32
NUP50-217ENST00000491860 TMEM68Q96MH6 324 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 SLA2Q9H6Q3 261 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 ACOT13Q9NPJ3 140 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 ZNF221Q9UK13 617 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 BLOC1S6Q9UL45 172 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 LSM2Q9Y333 95 aaKnown RBP6.82□□□□□ -1.32
NUP50-217ENST00000491860 LSM4Q9Y4Z0 139 aaKnown RBP6.82□□□□□ -1.32
NUP50-217ENST00000491860 BIRC6Q9NR09 4857 aa6.82□□□□□ -1.32
NUP50-217ENST00000491860 H3BUA1 57 aa6.81□□□□□ -1.32
NUP50-217ENST00000491860 PDCD5O14737 125 aa6.81□□□□□ -1.32
NUP50-217ENST00000491860 OVOL1O14753 267 aa6.81□□□□□ -1.32
NUP50-217ENST00000491860 ST8SIA5O15466 376 aa6.81□□□□□ -1.32
NUP50-217ENST00000491860 TFAP2AP05549 437 aa6.81□□□□□ -1.32
NUP50-217ENST00000491860 LGALS1P09382 135 aaKnown RBP6.81□□□□□ -1.32
NUP50-217ENST00000491860 CT45A6P0DMU7 189 aa6.81□□□□□ -1.32
NUP50-217ENST00000491860 CT45A5P0DMU8 189 aa6.81□□□□□ -1.32
NUP50-217ENST00000491860 CT45A7P0DMV0 189 aa6.81□□□□□ -1.32
NUP50-217ENST00000491860 CPEP16870 476 aa6.81□□□□□ -1.32
NUP50-217ENST00000491860 GADD45AP24522 165 aa6.81□□□□□ -1.32
NUP50-217ENST00000491860 HSPA13P48723 471 aa6.81□□□□□ -1.32
NUP50-217ENST00000491860 LUMP51884 338 aaPredicted RBP6.81□□□□□ -1.32
NUP50-217ENST00000491860 QRFPP83859 136 aa6.81□□□□□ -1.32
NUP50-217ENST00000491860 IRF3Q14653 427 aa6.81□□□□□ -1.32
NUP50-217ENST00000491860 ARL6IP1Q15041 203 aa6.81□□□□□ -1.32
NUP50-217ENST00000491860 MOGAT2Q3SYC2 334 aa6.81□□□□□ -1.32
NUP50-217ENST00000491860 LIPKQ5VXJ0 399 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms