RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 SDSLQ96GA7 329 aa8.97□□□□□ -0.97
USP4-214ENST00000491791 DIRC2Q96SL1 478 aa8.97□□□□□ -0.97
USP4-214ENST00000491791 SMDT1Q9H4I9 107 aa8.97□□□□□ -0.97
USP4-214ENST00000491791 LINC00574Q9H8X3 128 aa8.97□□□□□ -0.97
USP4-214ENST00000491791 Q9UFV3 132 aa8.97□□□□□ -0.97
USP4-214ENST00000491791 OR14J1Q9UGF5 321 aa8.97□□□□□ -0.97
USP4-214ENST00000491791 LAMP3Q9UQV4 416 aa8.97□□□□□ -0.97
USP4-214ENST00000491791 ITPR2Q14571 2701 aa8.96□□□□□ -0.97
USP4-214ENST00000491791 A0A0G2JRQ6 117 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 IGSF23A1L1A6 192 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 A1L4Q6 167 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 C16orf97H3BN30 126 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 K7N7A8 449 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 TOR1AO14656 332 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 CHST1O43916 411 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 FBXO24O75426 580 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 IGKV1-5P01602 117 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 OR8U9P0C7N5 309 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 IL2RGP31785 369 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 CCKARP32238 428 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 LPAR6P43657 344 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 SELENOVP59797 346 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 VAMP2P63027 116 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 NHLH2Q02577 135 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 CATR1Q13166 79 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 AARDQ4LEZ3 155 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 KRBOX4Q5JUW0 171 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 FAM209AQ5JX71 171 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 HIST2H2BCQ6DN03 193 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 LRP11Q86VZ4 500 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 ZNF295-AS1Q8N0V1 137 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 OR8U1Q8NH10 309 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 OR1L1Q8NH94 360 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 OR2V2Q96R30 315 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 HSD17B10Q99714 261 aaKnown RBP8.96□□□□□ -0.98
USP4-214ENST00000491791 AGMATQ9BSE5 352 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 SEC11CQ9BY50 192 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 PARD6GQ9BYG4 376 aaPredicted RBP8.96□□□□□ -0.98
USP4-214ENST00000491791 FAM234AQ9H0X4 552 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 RAB9BQ9NP90 201 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 UFSP2Q9NUQ7 469 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 LUZP4Q9P127 313 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 CACFD1Q9UGQ2 172 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 JPT1Q9UK76 154 aa8.96□□□□□ -0.98
USP4-214ENST00000491791 CHD3Q12873 2000 aaKnown RBP8.95□□□□□ -0.98
USP4-214ENST00000491791 DOPEY1Q5JWR5 2465 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 TRAV39A0A0B4J263 110 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 ODAMA1E959 279 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 FAM24AA6NFZ4 105 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 FAM90A9PA6NNJ1 464 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 RBFOX2O43251 390 aaKnown RBP eCLIP8.95□□□□□ -0.98
USP4-214ENST00000491791 SPINT2O43291 252 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 TXNL1O43396 289 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 YPEL1O60688 119 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 MED6O75586 246 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 DFFBO76075 338 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 LY86O95711 162 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 OR8U8P0C7N1 319 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 EGR1P18146 543 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 GABRA2P47869 451 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 GLIPR1P48060 266 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 CEBPDP49716 269 aaPredicted RBP8.95□□□□□ -0.98
USP4-214ENST00000491791 RPL23AP62750 156 aaKnown RBP8.95□□□□□ -0.98
USP4-214ENST00000491791 FAM27E3Q08E93 113 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 SWI5Q1ZZU3 235 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 MIDNQ504T8 468 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 TMEM108Q6UXF1 575 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 DPPA3Q6W0C5 159 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 Q6ZRM9 215 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 OR13A1Q8NGR1 328 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 OR51H1Q8NH63 302 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 CD300LFQ8TDQ1 290 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 EDARADDQ8WWZ3 215 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 CORO2AQ92828 525 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 GNPNAT1Q96EK6 184 aaPredicted RBP8.95□□□□□ -0.98
USP4-214ENST00000491791 YPEL2Q96QA6 119 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 GPHA2Q96T91 129 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 SCRT1Q9BWW7 348 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 PARP12Q9H0J9 701 aaKnown RBP8.95□□□□□ -0.98
USP4-214ENST00000491791 UQCC1Q9NVA1 299 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 RNF7Q9UBF6 113 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 DUSP13Q9UII6 198 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 METRNQ9UJH8 293 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 FZR1Q9UM11 496 aa8.95□□□□□ -0.98
USP4-214ENST00000491791 HIVEP3Q5T1R4 2406 aa8.94□□□□□ -0.98
USP4-214ENST00000491791 BTBD17A6NE02 478 aa8.94□□□□□ -0.98
USP4-214ENST00000491791 FAM157AC9JC47 383 aa8.94□□□□□ -0.98
USP4-214ENST00000491791 ATP6V1G2-DDX39BF2Z307 99 aa8.94□□□□□ -0.98
USP4-214ENST00000491791 ABCD4O14678 606 aa8.94□□□□□ -0.98
USP4-214ENST00000491791 TNFSF12O43508 249 aa8.94□□□□□ -0.98
USP4-214ENST00000491791 SYNGR2O43760 224 aa8.94□□□□□ -0.98
USP4-214ENST00000491791 SSSCA1O60232 199 aa8.94□□□□□ -0.98
USP4-214ENST00000491791 SULT1A1P50225 295 aa8.94□□□□□ -0.98
USP4-214ENST00000491791 DVL1P1P54792 670 aaPredicted RBP8.94□□□□□ -0.98
USP4-214ENST00000491791 BRWD1-AS2P59051 145 aa8.94□□□□□ -0.98
USP4-214ENST00000491791 TEX36Q5VZQ5 186 aa8.94□□□□□ -0.98
USP4-214ENST00000491791 GFRALQ6UXV0 394 aa8.94□□□□□ -0.98
USP4-214ENST00000491791 FGFRL1Q8N441 504 aa8.94□□□□□ -0.98
USP4-214ENST00000491791 ZNF561Q8N587 486 aa8.94□□□□□ -0.98
USP4-214ENST00000491791 NINJ1Q92982 152 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms