RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 RPL23AP62750 156 aaKnown RBP11.91□□□□□ -0.5
USP39-217ENST00000491659 PLA2G7Q13093 441 aa11.91□□□□□ -0.5
USP39-217ENST00000491659 BEAN1Q3B7T3 259 aa11.91□□□□□ -0.5
USP39-217ENST00000491659 ZNF773Q6PK81 442 aa11.91□□□□□ -0.5
USP39-217ENST00000491659 OR10R2Q8NGX6 335 aa11.91□□□□□ -0.5
USP39-217ENST00000491659 ZNF251Q9BRH9 671 aa11.91□□□□□ -0.5
USP39-217ENST00000491659 TXNL4BQ9NX01 149 aaKnown RBP11.91□□□□□ -0.5
USP39-217ENST00000491659 SCOCQ9UIL1 159 aa11.91□□□□□ -0.5
USP39-217ENST00000491659 METTL21EPA6NDL7 271 aa11.9□□□□□ -0.5
USP39-217ENST00000491659 FGF9P31371 208 aaPredicted RBP11.9□□□□□ -0.5
USP39-217ENST00000491659 CEACAM6P40199 344 aa11.9□□□□□ -0.5
USP39-217ENST00000491659 ACTBP60709 375 aa11.9□□□□□ -0.5
USP39-217ENST00000491659 PHF21AQ96BD5 680 aa11.9□□□□□ -0.5
USP39-217ENST00000491659 GHITMQ9H3K2 345 aa11.9□□□□□ -0.5
USP39-217ENST00000491659 OR1A1Q9P1Q5 309 aa11.9□□□□□ -0.5
USP39-217ENST00000491659 ZNF107Q9UII5 783 aaPredicted RBP11.9□□□□□ -0.5
USP39-217ENST00000491659 SSR3Q9UNL2 185 aa11.9□□□□□ -0.5
USP39-217ENST00000491659 A0A075B6Q4 140 aa11.89□□□□□ -0.51
USP39-217ENST00000491659 A0A0B4J203 849 aa11.89□□□□□ -0.51
USP39-217ENST00000491659 OR5H14A6NHG9 310 aa11.89□□□□□ -0.51
USP39-217ENST00000491659 LINC01548A6NM66 108 aa11.89□□□□□ -0.51
USP39-217ENST00000491659 NUDT19A8MXV4 375 aa11.89□□□□□ -0.51
USP39-217ENST00000491659 TRDCB7Z8K6 153 aa11.89□□□□□ -0.51
USP39-217ENST00000491659 NBR2O15453 112 aa11.89□□□□□ -0.51
USP39-217ENST00000491659 SCTP09683 121 aa11.89□□□□□ -0.51
USP39-217ENST00000491659 SLC2A2P11168 524 aaPredicted RBP11.89□□□□□ -0.51
USP39-217ENST00000491659 VDAC1P21796 283 aa11.89□□□□□ -0.51
USP39-217ENST00000491659 KIR2DS1Q14954 304 aa11.89□□□□□ -0.51
USP39-217ENST00000491659 MOGAT2Q3SYC2 334 aa11.89□□□□□ -0.51
USP39-217ENST00000491659 RPL39P5Q59GN2 51 aa11.89□□□□□ -0.51
USP39-217ENST00000491659 KPRPQ5T749 579 aaPredicted RBP11.89□□□□□ -0.51
USP39-217ENST00000491659 TEX38Q6PEX7 206 aa11.89□□□□□ -0.51
USP39-217ENST00000491659 PTX4Q96A99 478 aa11.89□□□□□ -0.51
USP39-217ENST00000491659 RBMXL1Q96E39 390 aaKnown RBP11.89□□□□□ -0.51
USP39-217ENST00000491659 ABHD14BQ96IU4 210 aa11.89□□□□□ -0.51
USP39-217ENST00000491659 HSPB9Q9BQS6 159 aa11.89□□□□□ -0.51
USP39-217ENST00000491659 PARP12Q9H0J9 701 aaKnown RBP11.89□□□□□ -0.51
USP39-217ENST00000491659 ZFP57Q9NU63 452 aa11.89□□□□□ -0.51
USP39-217ENST00000491659 KIAA1456Q9P272 454 aa11.89□□□□□ -0.51
USP39-217ENST00000491659 SMIM30A4D0T7 59 aa11.88□□□□□ -0.51
USP39-217ENST00000491659 NOTOA8MTQ0 251 aa11.88□□□□□ -0.51
USP39-217ENST00000491659 MFNGO00587 321 aa11.88□□□□□ -0.51
USP39-217ENST00000491659 FABP7O15540 132 aa11.88□□□□□ -0.51
USP39-217ENST00000491659 FCGR3AP08637 254 aa11.88□□□□□ -0.51
USP39-217ENST00000491659 HIST1H1DP16402 221 aaKnown RBP11.88□□□□□ -0.51
USP39-217ENST00000491659 GNB3P16520 340 aa11.88□□□□□ -0.51
USP39-217ENST00000491659 SLC6A1P30531 599 aa11.88□□□□□ -0.51
USP39-217ENST00000491659 SERPINB10P48595 397 aa11.88□□□□□ -0.51
USP39-217ENST00000491659 PNLIPRP3Q17RR3 467 aa11.88□□□□□ -0.51
USP39-217ENST00000491659 KCTD21Q4G0X4 260 aa11.88□□□□□ -0.51
USP39-217ENST00000491659 OXLD1Q5BKU9 147 aa11.88□□□□□ -0.51
USP39-217ENST00000491659 CXorf66Q5JRM2 361 aaPredicted RBP11.88□□□□□ -0.51
USP39-217ENST00000491659 FAM131AQ6UXB0 335 aa11.88□□□□□ -0.51
USP39-217ENST00000491659 TPRA1Q86W33 373 aa11.88□□□□□ -0.51
USP39-217ENST00000491659 NR2C2APQ86WQ0 139 aa11.88□□□□□ -0.51
USP39-217ENST00000491659 KLHL30-AS1Q8NEE0 82 aa11.88□□□□□ -0.51
USP39-217ENST00000491659 OR4A4PQ8NGN8 299 aa11.88□□□□□ -0.51
USP39-217ENST00000491659 C11orf54Q9H0W9 315 aaPredicted RBP11.88□□□□□ -0.51
USP39-217ENST00000491659 ATG5Q9H1Y0 275 aa11.88□□□□□ -0.51
USP39-217ENST00000491659 ZNF221Q9UK13 617 aa11.88□□□□□ -0.51
USP39-217ENST00000491659 KCNK7Q9Y2U2 307 aa11.88□□□□□ -0.51
USP39-217ENST00000491659 H7C2Y5 167 aa11.87□□□□□ -0.51
USP39-217ENST00000491659 RAB27BO00194 218 aa11.87□□□□□ -0.51
USP39-217ENST00000491659 HLA-DRB1P01911 266 aa11.87□□□□□ -0.51
USP39-217ENST00000491659 OR5H8P0DN80 308 aa11.87□□□□□ -0.51
USP39-217ENST00000491659 CNTFRP26992 372 aa11.87□□□□□ -0.51
USP39-217ENST00000491659 TALDO1P37837 337 aa11.87□□□□□ -0.51
USP39-217ENST00000491659 ARFRP1Q13795 201 aa11.87□□□□□ -0.51
USP39-217ENST00000491659 ARL6IP1Q15041 203 aa11.87□□□□□ -0.51
USP39-217ENST00000491659 NEDD8Q15843 81 aa11.87□□□□□ -0.51
USP39-217ENST00000491659 WFDC9Q8NEX5 89 aa11.87□□□□□ -0.51
USP39-217ENST00000491659 KCTD7Q96MP8 289 aa11.87□□□□□ -0.51
USP39-217ENST00000491659 AGMATQ9BSE5 352 aa11.87□□□□□ -0.51
USP39-217ENST00000491659 OR51E2Q9H255 320 aa11.87□□□□□ -0.51
USP39-217ENST00000491659 RDH8Q9NYR8 311 aa11.87□□□□□ -0.51
USP39-217ENST00000491659 ZNF580Q9UK33 172 aa11.87□□□□□ -0.51
USP39-217ENST00000491659 WASHC3Q9Y3C0 194 aa11.87□□□□□ -0.51
USP39-217ENST00000491659 IGKV1-6A0A0C4DH72 117 aa11.86□□□□□ -0.51
USP39-217ENST00000491659 BET1O15155 118 aa11.86□□□□□ -0.51
USP39-217ENST00000491659 SCGNO76038 276 aa11.86□□□□□ -0.51
USP39-217ENST00000491659 IGF1P05019 195 aa11.86□□□□□ -0.51
USP39-217ENST00000491659 ELANEP08246 267 aa11.86□□□□□ -0.51
USP39-217ENST00000491659 CT45A6P0DMU7 189 aa11.86□□□□□ -0.51
USP39-217ENST00000491659 CT45A5P0DMU8 189 aa11.86□□□□□ -0.51
USP39-217ENST00000491659 CT45A7P0DMV0 189 aa11.86□□□□□ -0.51
USP39-217ENST00000491659 IGLL1P15814 213 aa11.86□□□□□ -0.51
USP39-217ENST00000491659 MC5RP33032 325 aa11.86□□□□□ -0.51
USP39-217ENST00000491659 FOXE3Q13461 319 aa11.86□□□□□ -0.51
USP39-217ENST00000491659 C5orf64Q2M2E5 130 aa11.86□□□□□ -0.51
USP39-217ENST00000491659 SFXN4Q6P4A7 337 aa11.86□□□□□ -0.51
USP39-217ENST00000491659 GLDNQ6ZMI3 551 aaPredicted RBP11.86□□□□□ -0.51
USP39-217ENST00000491659 C8orf86Q6ZUL3 223 aa11.86□□□□□ -0.51
USP39-217ENST00000491659 REC114Q7Z4M0 266 aa11.86□□□□□ -0.51
USP39-217ENST00000491659 ZNF695Q8IW36 515 aa11.86□□□□□ -0.51
USP39-217ENST00000491659 NPBQ8NG41 125 aa11.86□□□□□ -0.51
USP39-217ENST00000491659 RCC1LQ96I51 464 aaKnown RBP11.86□□□□□ -0.51
USP39-217ENST00000491659 RITA1Q96K30 269 aa11.86□□□□□ -0.51
USP39-217ENST00000491659 CHCHD6Q9BRQ6 235 aa11.86□□□□□ -0.51
USP39-217ENST00000491659 CABLES2Q9BTV7 478 aa11.86□□□□□ -0.51
USP39-217ENST00000491659 DAPK2Q9UIK4 370 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms