RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 ZNF833PQ6ZTB9 187 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 ODF3L1Q8IXM7 274 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 RNF152Q8N8N0 203 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 OR8U1Q8NH10 309 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 KCTD7Q96MP8 289 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 P2RX4Q99571 388 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 GFI1Q99684 422 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 ZNF251Q9BRH9 671 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 URM1Q9BTM9 101 aaKnown RBP6.48□□□□□ -1.37
LSM2-213ENST00000491421 LPAR5Q9H1C0 372 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 IFI27L2Q9H2X8 130 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 VCX3BQ9H321 246 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 DUSP21Q9H596 190 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 ISYNA1Q9NPH2 558 aa6.48□□□□□ -1.37
LSM2-213ENST00000491421 WI2-2373I1.2A0A1W2PRP0 233 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 RAB29O14966 203 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 NBR2O15453 112 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 SOCS1O15524 211 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 HLA-DRB1P01911 266 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 CRHBPP24387 322 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 CNTFRP26992 372 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 MAP2K4P45985 399 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 CDX1P47902 265 aaPredicted RBP6.47□□□□□ -1.37
LSM2-213ENST00000491421 HSPA13P48723 471 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 KIR2DS1Q14954 304 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 DEFB136Q30KP8 78 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 DEFB121Q5J5C9 76 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 FAM71F2Q6NXP2 309 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 ZNF880Q6PDB4 577 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 TMEM65Q6PI78 240 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 IZUMO2Q6UXV1 221 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 PRSS48Q7RTY5 328 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 ANKRD13BQ86YJ7 626 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 ARL6IP6Q8N6S5 226 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 C4orf3Q8WVX3 66 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 RITA1Q96K30 269 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 MGLLQ99685 303 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 CHCHD6Q9BRQ6 235 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 HDHD3Q9BSH5 251 aaPredicted RBP6.47□□□□□ -1.37
LSM2-213ENST00000491421 CENPOQ9BU64 300 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 OR51J1Q9H342 316 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 RIMS4Q9H426 269 aaPredicted RBP6.47□□□□□ -1.37
LSM2-213ENST00000491421 ACOT13Q9NPJ3 140 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 C12orf4Q9NQ89 552 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 PARP11Q9NR21 331 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 PIPOXQ9P0Z9 390 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 KIAA1456Q9P272 454 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 ZMAT5Q9UDW3 170 aaKnown RBP6.47□□□□□ -1.37
LSM2-213ENST00000491421 SLC23A1Q9UHI7 598 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 AK3Q9UIJ7 227 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 ZNF580Q9UK33 172 aa6.47□□□□□ -1.37
LSM2-213ENST00000491421 AK6Q9Y3D8 172 aaKnown RBP6.47□□□□□ -1.37
LSM2-213ENST00000491421 TRBV6-6A0A0A6YYG2 114 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 G3V318 75 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 ATP6V0E1O15342 81 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 HSPA12AO43301 675 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 ZBTB25P24278 435 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 PSMB8P28062 276 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 CEACAM6P40199 344 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 RANBP1P43487 201 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 VEGFCP49767 419 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 CLDN12P56749 244 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 HLA-DRB3P79483 266 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 FABP5Q01469 135 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 C5orf64Q2M2E5 130 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 RPL39P5Q59GN2 51 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 LIN54Q6MZP7 749 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 FAM131AQ6UXB0 335 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 FAM89BQ8N5H3 189 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 NPBQ8NG41 125 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 OR5M8Q8NGP6 311 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 EDARADDQ8WWZ3 215 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 FAM3DQ96BQ1 224 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 ARHGAP5-AS1Q96IT6 56 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 CNBD2Q96M20 576 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 PARP12Q9H0J9 701 aaKnown RBP6.46□□□□□ -1.38
LSM2-213ENST00000491421 GHITMQ9H3K2 345 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 OR1A1Q9P1Q5 309 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 BLOC1S6Q9UL45 172 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 HSF4Q9ULV5 492 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 MGAT4AQ9UM21 535 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 WSB1Q9Y6I7 421 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 V9GY05 133 aa6.46□□□□□ -1.38
LSM2-213ENST00000491421 IGHV7-81A0A0B4J1V7 117 aa6.45□□□□□ -1.38
LSM2-213ENST00000491421 TRAV41A0A0B4J266 112 aa6.45□□□□□ -1.38
LSM2-213ENST00000491421 OR5H14A6NHG9 310 aa6.45□□□□□ -1.38
LSM2-213ENST00000491421 TRIM64CA6NLI5 447 aa6.45□□□□□ -1.38
LSM2-213ENST00000491421 FOXI3A8MTJ6 420 aaPredicted RBP6.45□□□□□ -1.38
LSM2-213ENST00000491421 H7C2Y5 167 aa6.45□□□□□ -1.38
LSM2-213ENST00000491421 ITGB1BP1O14713 200 aa6.45□□□□□ -1.38
LSM2-213ENST00000491421 DENRO43583 198 aaKnown RBP6.45□□□□□ -1.38
LSM2-213ENST00000491421 NDUFA3O95167 84 aa6.45□□□□□ -1.38
LSM2-213ENST00000491421 SCTP09683 121 aa6.45□□□□□ -1.38
LSM2-213ENST00000491421 CT45A6P0DMU7 189 aa6.45□□□□□ -1.38
LSM2-213ENST00000491421 CT45A5P0DMU8 189 aa6.45□□□□□ -1.38
LSM2-213ENST00000491421 CT45A7P0DMV0 189 aa6.45□□□□□ -1.38
LSM2-213ENST00000491421 PPIFP30405 207 aaKnown RBP6.45□□□□□ -1.38
LSM2-213ENST00000491421 MC5RP33032 325 aa6.45□□□□□ -1.38
LSM2-213ENST00000491421 PSMD7P51665 324 aa6.45□□□□□ -1.38
LSM2-213ENST00000491421 LUMP51884 338 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms