RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 RAMP3O60896 148 aa11.48□□□□□ -0.57
SMPD4-219ENST00000491128 CGB3P0DN86 165 aa11.48□□□□□ -0.57
SMPD4-219ENST00000491128 CGB7P0DN87 165 aa11.48□□□□□ -0.57
SMPD4-219ENST00000491128 S100A10P60903 97 aa11.48□□□□□ -0.57
SMPD4-219ENST00000491128 DTX2Q86UW9 622 aa11.48□□□□□ -0.57
SMPD4-219ENST00000491128 BVESQ8NE79 360 aa11.48□□□□□ -0.57
SMPD4-219ENST00000491128 OR52M1Q8NGK5 317 aa11.48□□□□□ -0.57
SMPD4-219ENST00000491128 TMEM222Q9H0R3 208 aa11.48□□□□□ -0.57
SMPD4-219ENST00000491128 CLN8Q9UBY8 286 aa11.48□□□□□ -0.57
SMPD4-219ENST00000491128 PROP1O75360 226 aa11.48□□□□□ -0.57
SMPD4-219ENST00000491128 F2RP25116 425 aa11.48□□□□□ -0.57
SMPD4-219ENST00000491128 RAB32Q13637 225 aa11.48□□□□□ -0.57
SMPD4-219ENST00000491128 LRRC10Q5BKY1 277 aa11.48□□□□□ -0.57
SMPD4-219ENST00000491128 RAB18Q9NP72 206 aa11.48□□□□□ -0.57
SMPD4-219ENST00000491128 SDHAF2Q9NX18 166 aa11.48□□□□□ -0.57
SMPD4-219ENST00000491128 H0YIZ8 118 aa11.47□□□□□ -0.57
SMPD4-219ENST00000491128 EPHA1P21709 976 aa11.47□□□□□ -0.57
SMPD4-219ENST00000491128 ZNF695Q8IW36 515 aa11.47□□□□□ -0.57
SMPD4-219ENST00000491128 MBD2Q9UBB5 411 aa11.47□□□□□ -0.57
SMPD4-219ENST00000491128 PTPN13Q12923 2485 aa11.47□□□□□ -0.57
SMPD4-219ENST00000491128 A0A0G2JRQ6 117 aa11.47□□□□□ -0.57
SMPD4-219ENST00000491128 LINC00473A8K010 186 aa11.47□□□□□ -0.57
SMPD4-219ENST00000491128 CLDN1O95832 211 aa11.47□□□□□ -0.57
SMPD4-219ENST00000491128 IGHV2-70P01814 119 aa11.47□□□□□ -0.57
SMPD4-219ENST00000491128 HLA-GP17693 338 aa11.47□□□□□ -0.57
SMPD4-219ENST00000491128 PAX5Q02548 391 aa11.47□□□□□ -0.57
SMPD4-219ENST00000491128 ZNF816Q0VGE8 651 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-219ENST00000491128 SELENOHQ8IZQ5 122 aaKnown RBP11.47□□□□□ -0.57
SMPD4-219ENST00000491128 OR5AC2Q9NZP5 309 aa11.47□□□□□ -0.57
SMPD4-219ENST00000491128 MPC2O95563 127 aa11.46□□□□□ -0.57
SMPD4-219ENST00000491128 HTD2P86397 168 aa11.46□□□□□ -0.57
SMPD4-219ENST00000491128 CR1LQ2VPA4 569 aa11.46□□□□□ -0.57
SMPD4-219ENST00000491128 CT45A1Q5HYN5 189 aa11.46□□□□□ -0.57
SMPD4-219ENST00000491128 ZNF525Q8N782 197 aa11.46□□□□□ -0.57
SMPD4-219ENST00000491128 ZNF645Q8N7E2 425 aa11.46□□□□□ -0.57
SMPD4-219ENST00000491128 CT45A3Q8NHU0 189 aa11.46□□□□□ -0.57
SMPD4-219ENST00000491128 C18orf12Q96KH6 178 aa11.46□□□□□ -0.57
SMPD4-219ENST00000491128 SUCNR1Q9BXA5 334 aa11.46□□□□□ -0.57
SMPD4-219ENST00000491128 SEBOXQ9HB31 216 aaPredicted RBP11.46□□□□□ -0.57
SMPD4-219ENST00000491128 COMMD9Q9P000 198 aa11.46□□□□□ -0.57
SMPD4-219ENST00000491128 hADV38S2A0JD32 116 aa11.46□□□□□ -0.58
SMPD4-219ENST00000491128 IGKV1-39P01597 117 aa11.46□□□□□ -0.58
SMPD4-219ENST00000491128 IGKV1D-39P04432 117 aa11.46□□□□□ -0.58
SMPD4-219ENST00000491128 LGI3Q8N145 548 aa11.46□□□□□ -0.58
SMPD4-219ENST00000491128 LSM5Q9Y4Y9 91 aaKnown RBP11.46□□□□□ -0.58
SMPD4-219ENST00000491128 HELZ2Q9BYK8 2649 aaKnown RBP11.46□□□□□ -0.58
SMPD4-219ENST00000491128 C17orf98A8MV24 154 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 SERPINE2P07093 398 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 BRWD1-AS2P59051 145 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 ZNF585BQ52M93 769 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 CLEC9AQ6UXN8 241 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 ZNF841Q6ZN19 808 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 ZNF546Q86UE3 836 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 TCTEX1D2Q8WW35 142 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 POM121CA8CG34 1229 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 F2RL2O00254 374 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 IFNA21P01568 189 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 PSMB6P28072 239 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 HTR2BP41595 481 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 GPR12P47775 334 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 RND3P61587 244 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 C11orf87Q6NUJ2 197 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 LYG1Q8N1E2 194 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 C2orf50Q96LR7 162 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 ZNF714Q96N38 554 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 RNF126Q9BV68 326 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 IFI27L2Q9H2X8 130 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 GFOD1Q9NXC2 390 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 IDI2-AS1Q9NZ38 188 aa11.45□□□□□ -0.58
SMPD4-219ENST00000491128 A0A0B4J2A0 478 aa11.44□□□□□ -0.58
SMPD4-219ENST00000491128 CDS2O95674 445 aa11.44□□□□□ -0.58
SMPD4-219ENST00000491128 PCNPQ8WW12 178 aaKnown RBP11.44□□□□□ -0.58
SMPD4-219ENST00000491128 MAGT1Q9H0U3 335 aa11.44□□□□□ -0.58
SMPD4-219ENST00000491128 PLEKHF2Q9H8W4 249 aa11.44□□□□□ -0.58
SMPD4-219ENST00000491128 SHPKQ9UHJ6 478 aa11.44□□□□□ -0.58
SMPD4-219ENST00000491128 JPT1Q9UK76 154 aa11.44□□□□□ -0.58
SMPD4-219ENST00000491128 LINC00312Q9Y6C7 94 aa11.44□□□□□ -0.58
SMPD4-219ENST00000491128 L7N2F9 121 aa11.44□□□□□ -0.58
SMPD4-219ENST00000491128 UCP1P25874 307 aa11.44□□□□□ -0.58
SMPD4-219ENST00000491128 NCR3LG1Q68D85 454 aa11.44□□□□□ -0.58
SMPD4-219ENST00000491128 TRAT1Q6PIZ9 186 aa11.44□□□□□ -0.58
SMPD4-219ENST00000491128 DCUN1D4Q92564 292 aa11.44□□□□□ -0.58
SMPD4-219ENST00000491128 RRNAD1Q96FB5 475 aaKnown RBP11.44□□□□□ -0.58
SMPD4-219ENST00000491128 ABHD14AQ9BUJ0 271 aa11.44□□□□□ -0.58
SMPD4-219ENST00000491128 MFFQ9GZY8 342 aa11.44□□□□□ -0.58
SMPD4-219ENST00000491128 DSCAML1Q8TD84 2053 aa11.44□□□□□ -0.58
SMPD4-219ENST00000491128 H0Y980 276 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 M0R1X1 148 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 YPEL1O60688 119 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 KRASP01116 189 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 REG1BP48304 166 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 DIAPH2-AS1Q14236 149 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 Q6ZRM9 215 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 YPEL2Q96QA6 119 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 CITED4Q96RK1 184 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 NMES1Q9C002 83 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 ARL6Q9H0F7 186 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 KAAG1Q9UBP8 84 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 PRELID1Q9Y255 219 aa11.43□□□□□ -0.58
SMPD4-219ENST00000491128 MSGN1A6NI15 193 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms