RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 PARP12Q9H0J9 701 aaKnown RBP14.03□□□□□ -0.16
ERCC3-207ENST00000490062 PITPNC1Q9UKF7 332 aa14.03□□□□□ -0.16
ERCC3-207ENST00000490062 MRPS7Q9Y2R9 242 aaKnown RBP14.03□□□□□ -0.16
ERCC3-207ENST00000490062 IGHV1-3A0A0C4DH29 117 aa14.02□□□□□ -0.17
ERCC3-207ENST00000490062 A6NDX4 124 aa14.02□□□□□ -0.17
ERCC3-207ENST00000490062 BET1O15155 118 aa14.02□□□□□ -0.17
ERCC3-207ENST00000490062 TNFSF8P32971 234 aa14.02□□□□□ -0.17
ERCC3-207ENST00000490062 EBI3Q14213 229 aa14.02□□□□□ -0.17
ERCC3-207ENST00000490062 DIAPH2-AS1Q14236 149 aa14.02□□□□□ -0.17
ERCC3-207ENST00000490062 KRTAP24-1Q3LI83 254 aa14.02□□□□□ -0.17
ERCC3-207ENST00000490062 LYG1Q8N1E2 194 aa14.02□□□□□ -0.17
ERCC3-207ENST00000490062 OR5AP2Q8NGF4 316 aa14.02□□□□□ -0.17
ERCC3-207ENST00000490062 GCDHQ92947 438 aaPredicted RBP14.02□□□□□ -0.17
ERCC3-207ENST00000490062 DIRAS2Q96HU8 199 aa14.02□□□□□ -0.17
ERCC3-207ENST00000490062 BATF3Q9NR55 127 aa14.02□□□□□ -0.17
ERCC3-207ENST00000490062 ABCB10Q9NRK6 738 aa14.02□□□□□ -0.17
ERCC3-207ENST00000490062 PAX6P26367 422 aa14.01□□□□□ -0.17
ERCC3-207ENST00000490062 RCVRNP35243 200 aa14.01□□□□□ -0.17
ERCC3-207ENST00000490062 SSBP1Q04837 148 aaKnown RBP14.01□□□□□ -0.17
ERCC3-207ENST00000490062 C16orf82Q7Z2V1 217 aa14.01□□□□□ -0.17
ERCC3-207ENST00000490062 TGIF2LXQ8IUE1 241 aa14.01□□□□□ -0.17
ERCC3-207ENST00000490062 SNX29P2Q8IUI4 249 aa14.01□□□□□ -0.17
ERCC3-207ENST00000490062 TMEM158Q8WZ71 300 aa14.01□□□□□ -0.17
ERCC3-207ENST00000490062 GINS4Q9BRT9 223 aa14.01□□□□□ -0.17
ERCC3-207ENST00000490062 RAB18Q9NP72 206 aa14.01□□□□□ -0.17
ERCC3-207ENST00000490062 IFT46Q9NQC8 304 aa14.01□□□□□ -0.17
ERCC3-207ENST00000490062 NECAP2Q9NVZ3 263 aa14.01□□□□□ -0.17
ERCC3-207ENST00000490062 ZNF107Q9UII5 783 aaPredicted RBP14.01□□□□□ -0.17
ERCC3-207ENST00000490062 SAA2-SAA4A0A096LPE2 208 aa14□□□□□ -0.17
ERCC3-207ENST00000490062 GABARAPH6UMI1 98 aa14□□□□□ -0.17
ERCC3-207ENST00000490062 TIMM23O14925 209 aa14□□□□□ -0.17
ERCC3-207ENST00000490062 ST8SIA5O15466 376 aa14□□□□□ -0.17
ERCC3-207ENST00000490062 GPR137BO60478 399 aa14□□□□□ -0.17
ERCC3-207ENST00000490062 PROP1O75360 226 aa14□□□□□ -0.17
ERCC3-207ENST00000490062 SAA2P0DJI9 122 aaPredicted RBP14□□□□□ -0.17
ERCC3-207ENST00000490062 PTBP1P26599 531 aaKnown RBP eCLIP14□□□□□ -0.17
ERCC3-207ENST00000490062 CD1BP29016 333 aa14□□□□□ -0.17
ERCC3-207ENST00000490062 ETV6P41212 452 aa14□□□□□ -0.17
ERCC3-207ENST00000490062 TAS2R46P59540 309 aa14□□□□□ -0.17
ERCC3-207ENST00000490062 CDK10Q15131 360 aa14□□□□□ -0.17
ERCC3-207ENST00000490062 OVCH2Q7RTZ1 564 aa14□□□□□ -0.17
ERCC3-207ENST00000490062 SMIM4Q8WVI0 70 aa14□□□□□ -0.17
ERCC3-207ENST00000490062 DUX5Q96PT3 197 aa14□□□□□ -0.17
ERCC3-207ENST00000490062 S1PR3Q99500 378 aa14□□□□□ -0.17
ERCC3-207ENST00000490062 MTFP1Q9UDX5 166 aa14□□□□□ -0.17
ERCC3-207ENST00000490062 OR2W1Q9Y3N9 320 aa14□□□□□ -0.17
ERCC3-207ENST00000490062 ARPC4P59998 168 aa13.99□□□□□ -0.17
ERCC3-207ENST00000490062 ACTBP60709 375 aa13.99□□□□□ -0.17
ERCC3-207ENST00000490062 ACTG1P63261 375 aa13.99□□□□□ -0.17
ERCC3-207ENST00000490062 MSMO1Q15800 293 aa13.99□□□□□ -0.17
ERCC3-207ENST00000490062 DHRS11Q6UWP2 260 aa13.99□□□□□ -0.17
ERCC3-207ENST00000490062 CCBE1Q6UXH8 406 aaPredicted RBP13.99□□□□□ -0.17
ERCC3-207ENST00000490062 CCDC190Q86UF4 302 aa13.99□□□□□ -0.17
ERCC3-207ENST00000490062 LYSMD2Q8IV50 215 aa13.99□□□□□ -0.17
ERCC3-207ENST00000490062 GIMAP1Q8WWP7 306 aa13.99□□□□□ -0.17
ERCC3-207ENST00000490062 NABP2Q9BQ15 211 aa13.99□□□□□ -0.17
ERCC3-207ENST00000490062 RBMX2Q9Y388 322 aaKnown RBP13.99□□□□□ -0.17
ERCC3-207ENST00000490062 FBN1P35555 2871 aaKnown RBP13.98□□□□□ -0.17
ERCC3-207ENST00000490062 MEIS3P1A6NDR6 274 aa13.98□□□□□ -0.17
ERCC3-207ENST00000490062 FAM181BA6NEQ2 426 aa13.98□□□□□ -0.17
ERCC3-207ENST00000490062 GSTZ1O43708 216 aaPredicted RBP13.98□□□□□ -0.17
ERCC3-207ENST00000490062 SLC22A5O76082 557 aa13.98□□□□□ -0.17
ERCC3-207ENST00000490062 NDUFA7O95182 113 aa13.98□□□□□ -0.17
ERCC3-207ENST00000490062 FAM106CPP0CH98 169 aa13.98□□□□□ -0.17
ERCC3-207ENST00000490062 OR5H8P0DN80 308 aa13.98□□□□□ -0.17
ERCC3-207ENST00000490062 HKR1P10072 659 aa13.98□□□□□ -0.17
ERCC3-207ENST00000490062 TBPP20226 339 aa13.98□□□□□ -0.17
ERCC3-207ENST00000490062 S100A5P33763 92 aa13.98□□□□□ -0.17
ERCC3-207ENST00000490062 RAB13P51153 203 aa13.98□□□□□ -0.17
ERCC3-207ENST00000490062 SRSF2Q01130 221 aaKnown RBP13.98□□□□□ -0.17
ERCC3-207ENST00000490062 LSAMPQ13449 338 aa13.98□□□□□ -0.17
ERCC3-207ENST00000490062 DYRK1AQ13627 763 aa13.98□□□□□ -0.17
ERCC3-207ENST00000490062 ZNF660Q6AZW8 331 aaPredicted RBP13.98□□□□□ -0.17
ERCC3-207ENST00000490062 LINC00299Q6ZSB3 139 aa13.98□□□□□ -0.17
ERCC3-207ENST00000490062 DRAM1Q8N682 238 aa13.98□□□□□ -0.17
ERCC3-207ENST00000490062 OR6Q1Q8NGQ2 317 aa13.98□□□□□ -0.17
ERCC3-207ENST00000490062 OR52I2Q8NH67 350 aa13.98□□□□□ -0.17
ERCC3-207ENST00000490062 ABHD14BQ96IU4 210 aa13.98□□□□□ -0.17
ERCC3-207ENST00000490062 RANBP3Q9H6Z4 567 aaPredicted RBP13.98□□□□□ -0.17
ERCC3-207ENST00000490062 ZNF221Q9UK13 617 aa13.98□□□□□ -0.17
ERCC3-207ENST00000490062 TMEM89A2RUT3 159 aa13.97□□□□□ -0.17
ERCC3-207ENST00000490062 FABP12A6NFH5 140 aa13.97□□□□□ -0.17
ERCC3-207ENST00000490062 RBBP9O75884 186 aa13.97□□□□□ -0.17
ERCC3-207ENST00000490062 OR2F2O95006 317 aa13.97□□□□□ -0.17
ERCC3-207ENST00000490062 OR8U9P0C7N5 309 aa13.97□□□□□ -0.17
ERCC3-207ENST00000490062 OR3A3P47888 321 aa13.97□□□□□ -0.17
ERCC3-207ENST00000490062 REG1BP48304 166 aa13.97□□□□□ -0.17
ERCC3-207ENST00000490062 PLA1AQ53H76 456 aa13.97□□□□□ -0.17
ERCC3-207ENST00000490062 ACTBL2Q562R1 376 aa13.97□□□□□ -0.17
ERCC3-207ENST00000490062 VAX1Q5SQQ9 334 aa13.97□□□□□ -0.17
ERCC3-207ENST00000490062 Q8N6K4 173 aa13.97□□□□□ -0.17
ERCC3-207ENST00000490062 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.97□□□□□ -0.17
ERCC3-207ENST00000490062 OR5AN1Q8NGI8 311 aa13.97□□□□□ -0.17
ERCC3-207ENST00000490062 OR8U1Q8NH10 309 aa13.97□□□□□ -0.17
ERCC3-207ENST00000490062 OR56B4Q8NH76 319 aa13.97□□□□□ -0.17
ERCC3-207ENST00000490062 FCAMRQ8WWV6 532 aa13.97□□□□□ -0.17
ERCC3-207ENST00000490062 RBM14Q96PK6 669 aaKnown RBP13.97□□□□□ -0.17
ERCC3-207ENST00000490062 KLK11Q9UBX7 282 aa13.97□□□□□ -0.17
ERCC3-207ENST00000490062 V9GYH0 126 aa13.97□□□□□ -0.17
ERCC3-207ENST00000490062 TSPAN9O75954 239 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms