RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 OR5B3Q8NH48 314 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 UBA3Q8TBC4 463 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 STAG3L4Q8TBR4 150 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 LKAAEAR1Q8TD35 194 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 RNASEH2CQ8TDP1 164 aaKnown RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 ORAOV1Q8WV07 137 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 RLN3Q8WXF3 142 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 OR8D1Q8WZ84 308 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 RAB8BQ92930 207 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 TMEM106AQ96A25 262 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 SLC25A46Q96AG3 418 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 REEP6Q96HR9 211 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 MBOAT7Q96N66 472 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 TP53RKQ96S44 253 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 SIGMAR1Q99720 223 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 MICU1Q9BPX6 476 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 UTP23Q9BRU9 249 aaKnown RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 TMEM43Q9BTV4 400 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 TMEM70Q9BUB7 260 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 NUDT9Q9BW91 350 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 POTEKPQ9BYX7 375 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 MRPL37Q9BZE1 423 aaKnown RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 DPY30Q9C005 99 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 SLIRPQ9GZT3 109 aaKnown RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 OR51B6Q9H340 312 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 TCEAL2Q9H3H9 227 aaPredicted RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 MEAF6Q9HAF1 191 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 RHOFQ9HBH0 211 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 SGK2Q9HBY8 427 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 SLC17A5Q9NRA2 495 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 UBQLN4Q9NRR5 601 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 TMEM242Q9NWH2 141 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 FAM206AQ9NX38 181 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 OR5AC2Q9NZP5 309 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 PDP1Q9P0J1 537 aaPredicted RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 CD84Q9UIB8 345 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 VAX2Q9UIW0 290 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 FBXL3Q9UKT7 428 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 TFR2Q9UP52 801 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 SLC22A13Q9Y226 551 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 PIN4Q9Y237 131 aaKnown RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 BTRCQ9Y297 605 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 CARHSP1Q9Y2V2 147 aaKnown RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 RBM7Q9Y580 266 aaKnown RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 UBIAD1Q9Y5Z9 338 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 TMEM14AQ9Y6G1 99 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 ROBO3Q96MS0 1386 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 A0A1B0GUL6 1792 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 LAMA4Q16363 1823 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 SLX4Q8IY92 1834 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 COL4A5P29400 1685 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 TRAV30A0A087WSZ9 112 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 A0A087WWC5 75 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 TRAV39A0A0B4J263 110 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 A0A1B0GUH1 482 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 A0A1B0GV90 55 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 TMEM269A0A1B0GVZ9 245 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 TRDV1A0A1B0GX56 115 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 SLC5A10A0PJK1 596 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 TVP23AA6NH52 213 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 OR5H14A6NHG9 310 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 OR5H1A6NKK0 313 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 FAM159BA6NKW6 160 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 OR52A4PA6NMU1 304 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 ZNF705FA8MVS1 300 aaPredicted RBP1.56□□□□□ -2.16
HMGN1-218ENST00000490032 A8MWP6 167 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 LINC00587B1AMM8 73 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 OR11H12B2RN74 326 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 UMAD1C9J7I0 102 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 MCRIP1C9JLW8 97 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 TMEM262E9PQX1 116 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 F5H6K3 240 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 F8WDY8 70 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 MKRN2OSH3BPM6 223 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 CLDN34H7C241 214 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 K7EP13 123 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 CXCR6O00574 342 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 CYB5BO43169 146 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 RNF13O43567 381 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 MFSD11O43934 449 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 CACNG3O60359 315 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 OR7C2O60412 319 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 CTNSO60931 367 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 OR2J2O76002 312 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 UBL3O95164 117 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 CDRT1O95170 752 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 CLIC3O95833 236 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 IFNA1P01562 189 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 IFNA5P01569 189 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 HLA-DQB1P01920 261 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 PRH1P02810 166 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 MT-ND4P03905 459 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 TYMSP04818 313 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 CRHP06850 196 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 GP1BAP07359 652 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 ZNF705DP0CH99 300 aaPredicted RBP1.56□□□□□ -2.16
HMGN1-218ENST00000490032 ZNF705BP0CI00 300 aaPredicted RBP1.56□□□□□ -2.16
HMGN1-218ENST00000490032 ZNF35P13682 527 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 GABRA1P14867 456 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 FOLR1P15328 257 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms