RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 OR2AK2Q8NG84 335 aa10.63□□□□□ -0.71
VARS-227ENST00000489979 OR52I1Q8NGK6 324 aa10.63□□□□□ -0.71
VARS-227ENST00000489979 MRPL30Q8TCC3 161 aaKnown RBP10.63□□□□□ -0.71
VARS-227ENST00000489979 MUL1Q969V5 352 aa10.63□□□□□ -0.71
VARS-227ENST00000489979 BANF2Q9H503 90 aa10.63□□□□□ -0.71
VARS-227ENST00000489979 ZNF355PQ9NSJ1 428 aa10.63□□□□□ -0.71
VARS-227ENST00000489979 GMPPBQ9Y5P6 360 aa10.63□□□□□ -0.71
VARS-227ENST00000489979 C13orf42A0A1B0GVH6 325 aa10.62□□□□□ -0.71
VARS-227ENST00000489979 IZUMO1RA6ND01 250 aa10.62□□□□□ -0.71
VARS-227ENST00000489979 ST8SIA5O15466 376 aa10.62□□□□□ -0.71
VARS-227ENST00000489979 TFAP2AP05549 437 aa10.62□□□□□ -0.71
VARS-227ENST00000489979 CT45A6P0DMU7 189 aa10.62□□□□□ -0.71
VARS-227ENST00000489979 CT45A5P0DMU8 189 aa10.62□□□□□ -0.71
VARS-227ENST00000489979 CT45A7P0DMV0 189 aa10.62□□□□□ -0.71
VARS-227ENST00000489979 FUT3P21217 361 aa10.62□□□□□ -0.71
VARS-227ENST00000489979 SYNJ2BPP57105 145 aa10.62□□□□□ -0.71
VARS-227ENST00000489979 CCDC58Q4VC31 144 aa10.62□□□□□ -0.71
VARS-227ENST00000489979 RPL39P5Q59GN2 51 aa10.62□□□□□ -0.71
VARS-227ENST00000489979 SIGIRRQ6IA17 410 aa10.62□□□□□ -0.71
VARS-227ENST00000489979 FAM71F2Q6NXP2 309 aa10.62□□□□□ -0.71
VARS-227ENST00000489979 ZNF562Q6V9R5 426 aa10.62□□□□□ -0.71
VARS-227ENST00000489979 OR13C5Q8NGS8 318 aa10.62□□□□□ -0.71
VARS-227ENST00000489979 SELENOIQ9C0D9 397 aa10.62□□□□□ -0.71
VARS-227ENST00000489979 METTL1Q9UBP6 276 aaKnown RBP10.62□□□□□ -0.71
VARS-227ENST00000489979 CEPT1Q9Y6K0 416 aa10.62□□□□□ -0.71
VARS-227ENST00000489979 KMT2AQ03164 3969 aa10.61□□□□□ -0.71
VARS-227ENST00000489979 OR5H14A6NHG9 310 aa10.61□□□□□ -0.71
VARS-227ENST00000489979 H0YJW9 148 aa10.61□□□□□ -0.71
VARS-227ENST00000489979 H7C2Y5 167 aa10.61□□□□□ -0.71
VARS-227ENST00000489979 EI24O14681 340 aa10.61□□□□□ -0.71
VARS-227ENST00000489979 CA2P00918 260 aa10.61□□□□□ -0.71
VARS-227ENST00000489979 GLAP06280 429 aa10.61□□□□□ -0.71
VARS-227ENST00000489979 CSN3P07498 182 aa10.61□□□□□ -0.71
VARS-227ENST00000489979 LIMS3P0CW19 117 aa10.61□□□□□ -0.71
VARS-227ENST00000489979 LIMS4P0CW20 117 aa10.61□□□□□ -0.71
VARS-227ENST00000489979 C1orf146Q5VVC0 180 aa10.61□□□□□ -0.71
VARS-227ENST00000489979 DMKNQ6E0U4 476 aaPredicted RBP10.61□□□□□ -0.71
VARS-227ENST00000489979 AWAT2Q6E213 333 aa10.61□□□□□ -0.71
VARS-227ENST00000489979 LCN12Q6JVE5 192 aa10.61□□□□□ -0.71
VARS-227ENST00000489979 LINC00322Q6ZN03 302 aaPredicted RBP10.61□□□□□ -0.71
VARS-227ENST00000489979 Q8N402 240 aa10.61□□□□□ -0.71
VARS-227ENST00000489979 JAGN1Q8N5M9 183 aa10.61□□□□□ -0.71
VARS-227ENST00000489979 POC5Q8NA72 575 aa10.61□□□□□ -0.71
VARS-227ENST00000489979 GALMQ96C23 342 aa10.61□□□□□ -0.71
VARS-227ENST00000489979 PLEKHA3Q9HB20 300 aa10.61□□□□□ -0.71
VARS-227ENST00000489979 PIPOXQ9P0Z9 390 aa10.61□□□□□ -0.71
VARS-227ENST00000489979 ADAM30Q9UKF2 790 aa10.61□□□□□ -0.71
VARS-227ENST00000489979 TRAV8-7A0A075B6U6 113 aa10.6□□□□□ -0.71
VARS-227ENST00000489979 SHISA3A0PJX4 238 aa10.6□□□□□ -0.71
VARS-227ENST00000489979 FAM90A7PA6NKC0 464 aa10.6□□□□□ -0.71
VARS-227ENST00000489979 FAM90A23PA8MXZ1 464 aa10.6□□□□□ -0.71
VARS-227ENST00000489979 RAB29O14966 203 aa10.6□□□□□ -0.71
VARS-227ENST00000489979 GPX5O75715 221 aa10.6□□□□□ -0.71
VARS-227ENST00000489979 CRTAPO75718 401 aaPredicted RBP10.6□□□□□ -0.71
VARS-227ENST00000489979 RBBP9O75884 186 aa10.6□□□□□ -0.71
VARS-227ENST00000489979 BAG2O95816 211 aa10.6□□□□□ -0.71
VARS-227ENST00000489979 MGMTP16455 207 aa10.6□□□□□ -0.71
VARS-227ENST00000489979 MC5RP33032 325 aa10.6□□□□□ -0.71
VARS-227ENST00000489979 PSG5Q15238 335 aa10.6□□□□□ -0.71
VARS-227ENST00000489979 HMGN3Q15651 99 aa10.6□□□□□ -0.71
VARS-227ENST00000489979 MOGAT2Q3SYC2 334 aa10.6□□□□□ -0.71
VARS-227ENST00000489979 OR5T1Q8NG75 326 aa10.6□□□□□ -0.71
VARS-227ENST00000489979 RHOXF1Q8NHV9 184 aa10.6□□□□□ -0.71
VARS-227ENST00000489979 GRPEL2Q8TAA5 225 aa10.6□□□□□ -0.71
VARS-227ENST00000489979 LINC00476Q8WZB0 136 aa10.6□□□□□ -0.71
VARS-227ENST00000489979 Q96M66 194 aa10.6□□□□□ -0.71
VARS-227ENST00000489979 Q96MT0 163 aa10.6□□□□□ -0.71
VARS-227ENST00000489979 MRPS18AQ9NVS2 196 aaKnown RBP10.6□□□□□ -0.71
VARS-227ENST00000489979 CKLFQ9UBR5 152 aa10.6□□□□□ -0.71
VARS-227ENST00000489979 WASHC3Q9Y3C0 194 aa10.6□□□□□ -0.71
VARS-227ENST00000489979 A0A0G2JLM5 398 aa10.59□□□□□ -0.71
VARS-227ENST00000489979 TRBV5-5A0A0J9YX44 114 aa10.59□□□□□ -0.71
VARS-227ENST00000489979 SLC22A1O15245 554 aa10.59□□□□□ -0.71
VARS-227ENST00000489979 SLC25A17O43808 307 aa10.59□□□□□ -0.71
VARS-227ENST00000489979 PDCD6O75340 191 aa10.59□□□□□ -0.71
VARS-227ENST00000489979 FXYD3Q14802 87 aa10.59□□□□□ -0.71
VARS-227ENST00000489979 C6orf141Q5SZD1 244 aa10.59□□□□□ -0.71
VARS-227ENST00000489979 OR2G6Q5TZ20 316 aa10.59□□□□□ -0.71
VARS-227ENST00000489979 RNLSQ5VYX0 342 aa10.59□□□□□ -0.71
VARS-227ENST00000489979 OR5AN1Q8NGI8 311 aa10.59□□□□□ -0.71
VARS-227ENST00000489979 IL1F10Q8WWZ1 152 aa10.59□□□□□ -0.71
VARS-227ENST00000489979 ABHD14BQ96IU4 210 aa10.59□□□□□ -0.71
VARS-227ENST00000489979 OR14A2Q96R54 314 aa10.59□□□□□ -0.71
VARS-227ENST00000489979 RNF5Q99942 180 aa10.59□□□□□ -0.71
VARS-227ENST00000489979 STEAP1Q9UHE8 339 aa10.59□□□□□ -0.71
VARS-227ENST00000489979 SLC23A1Q9UHI7 598 aa10.59□□□□□ -0.71
VARS-227ENST00000489979 RPL36Q9Y3U8 105 aaKnown RBP10.59□□□□□ -0.71
VARS-227ENST00000489979 LRRC42Q9Y546 428 aa10.59□□□□□ -0.71
VARS-227ENST00000489979 A0A1W2PPK0 400 aa10.58□□□□□ -0.72
VARS-227ENST00000489979 H3BUA1 57 aa10.58□□□□□ -0.72
VARS-227ENST00000489979 OGG1O15527 345 aa10.58□□□□□ -0.72
VARS-227ENST00000489979 BRI3O95415 125 aa10.58□□□□□ -0.72
VARS-227ENST00000489979 TRBV12-3P01733 135 aa10.58□□□□□ -0.72
VARS-227ENST00000489979 ETV1P50549 477 aa10.58□□□□□ -0.72
VARS-227ENST00000489979 ALDH3A2P51648 485 aa10.58□□□□□ -0.72
VARS-227ENST00000489979 CD81P60033 236 aa10.58□□□□□ -0.72
VARS-227ENST00000489979 DEFA5Q01523 94 aa10.58□□□□□ -0.72
VARS-227ENST00000489979 GHSRQ92847 366 aa10.58□□□□□ -0.72
VARS-227ENST00000489979 FAM46BQ96A09 425 aa10.58□□□□□ -0.72
VARS-227ENST00000489979 SMIM19Q96E16 107 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms