RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 AGMATQ9BSE5 352 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 WNT10AQ9GZT5 417 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 TOLLIPQ9H0E2 274 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 DCSTAMPQ9H295 470 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 DIABLOQ9NR28 239 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 ZNF230Q9UIE0 474 aaPredicted RBP13.81□□□□□ -0.2
MDC1-206ENST00000489540 SAA2-SAA4A0A096LPE2 208 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 M0QZ24 198 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 GSTT2P0CG29 244 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 GSTT2BP0CG30 244 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 SAA2P0DJI9 122 aaPredicted RBP13.81□□□□□ -0.2
MDC1-206ENST00000489540 OR3A3P47888 321 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 LSAMPQ13449 338 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 ANKRD13BQ86YJ7 626 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 Q8N6K4 173 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 C5orf56Q8N8D9 126 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 OR10J5Q8NHC4 309 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 KCTD12Q96CX2 325 aaKnown RBP13.81□□□□□ -0.2
MDC1-206ENST00000489540 SLC25A38Q96DW6 304 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 CABLES2Q9BTV7 478 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 PARP12Q9H0J9 701 aaKnown RBP13.81□□□□□ -0.2
MDC1-206ENST00000489540 RDH8Q9NYR8 311 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 ELF5Q9UKW6 265 aaPredicted RBP13.81□□□□□ -0.2
MDC1-206ENST00000489540 TRAV18A0A075B6X5 111 aa13.8□□□□□ -0.2
MDC1-206ENST00000489540 TRBV6-7A0A0A0MS04 114 aa13.8□□□□□ -0.2
MDC1-206ENST00000489540 NCBP2LA6PVI3 153 aaKnown RBP13.8□□□□□ -0.2
MDC1-206ENST00000489540 ZNF736B4DX44 427 aaPredicted RBP13.8□□□□□ -0.2
MDC1-206ENST00000489540 BET1O15155 118 aa13.8□□□□□ -0.2
MDC1-206ENST00000489540 GNG2P59768 71 aa13.8□□□□□ -0.2
MDC1-206ENST00000489540 VBP1P61758 197 aa13.8□□□□□ -0.2
MDC1-206ENST00000489540 NCS1P62166 190 aa13.8□□□□□ -0.2
MDC1-206ENST00000489540 IGSF11Q5DX21 431 aa13.8□□□□□ -0.2
MDC1-206ENST00000489540 S100A16Q96FQ6 103 aaKnown RBP13.8□□□□□ -0.2
MDC1-206ENST00000489540 NABP2Q9BQ15 211 aa13.8□□□□□ -0.2
MDC1-206ENST00000489540 ST6GALNAC5Q9BVH7 336 aa13.8□□□□□ -0.2
MDC1-206ENST00000489540 MRPL20Q9BYC9 149 aaKnown RBP13.8□□□□□ -0.2
MDC1-206ENST00000489540 ABCG5Q9H222 651 aa13.8□□□□□ -0.2
MDC1-206ENST00000489540 TMEM235A6NFC5 223 aa13.79□□□□□ -0.2
MDC1-206ENST00000489540 C9orf152Q5JTZ5 239 aa13.79□□□□□ -0.2
MDC1-206ENST00000489540 MAFIPQ8WZ33 124 aa13.79□□□□□ -0.2
MDC1-206ENST00000489540 ABHD14BQ96IU4 210 aa13.79□□□□□ -0.2
MDC1-206ENST00000489540 ZNF251Q9BRH9 671 aa13.79□□□□□ -0.2
MDC1-206ENST00000489540 ZNF221Q9UK13 617 aa13.79□□□□□ -0.2
MDC1-206ENST00000489540 SH2D7A6NKC9 451 aaPredicted RBP13.78□□□□□ -0.2
MDC1-206ENST00000489540 CTXN2P0C2S0 81 aa13.78□□□□□ -0.2
MDC1-206ENST00000489540 ALDH3B2P48448 385 aa13.78□□□□□ -0.2
MDC1-206ENST00000489540 RPL39P5Q59GN2 51 aa13.78□□□□□ -0.2
MDC1-206ENST00000489540 GPR141Q7Z602 305 aa13.78□□□□□ -0.2
MDC1-206ENST00000489540 CENPVQ7Z7K6 275 aaPredicted RBP13.78□□□□□ -0.2
MDC1-206ENST00000489540 WIPF2Q8TF74 440 aaPredicted RBP13.78□□□□□ -0.2
MDC1-206ENST00000489540 NUDCD2Q8WVJ2 157 aa13.78□□□□□ -0.2
MDC1-206ENST00000489540 GINS4Q9BRT9 223 aa13.78□□□□□ -0.2
MDC1-206ENST00000489540 PLSCR3Q9NRY6 295 aa13.78□□□□□ -0.2
MDC1-206ENST00000489540 LIN7CQ9NUP9 197 aaKnown RBP13.78□□□□□ -0.2
MDC1-206ENST00000489540 RNF150Q9ULK6 438 aa13.78□□□□□ -0.2
MDC1-206ENST00000489540 GABARAPO95166 117 aa13.77□□□□□ -0.21
MDC1-206ENST00000489540 TFAP2AP05549 437 aa13.77□□□□□ -0.21
MDC1-206ENST00000489540 CT45A6P0DMU7 189 aa13.77□□□□□ -0.21
MDC1-206ENST00000489540 CT45A5P0DMU8 189 aa13.77□□□□□ -0.21
MDC1-206ENST00000489540 CT45A7P0DMV0 189 aa13.77□□□□□ -0.21
MDC1-206ENST00000489540 MC5RP33032 325 aa13.77□□□□□ -0.21
MDC1-206ENST00000489540 GPR12P47775 334 aa13.77□□□□□ -0.21
MDC1-206ENST00000489540 TMEM95Q3KNT9 176 aa13.77□□□□□ -0.21
MDC1-206ENST00000489540 UBE2NLQ5JXB2 153 aa13.77□□□□□ -0.21
MDC1-206ENST00000489540 GPR107Q5VW38 600 aa13.77□□□□□ -0.21
MDC1-206ENST00000489540 Q8N9W7 124 aa13.77□□□□□ -0.21
MDC1-206ENST00000489540 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.77□□□□□ -0.21
MDC1-206ENST00000489540 RASL11BQ9BPW5 248 aa13.77□□□□□ -0.21
MDC1-206ENST00000489540 GAB2Q9UQC2 676 aa13.77□□□□□ -0.21
MDC1-206ENST00000489540 XRCC3O43542 346 aa13.76□□□□□ -0.21
MDC1-206ENST00000489540 SSX5O60225 188 aa13.76□□□□□ -0.21
MDC1-206ENST00000489540 FBXO24O75426 580 aa13.76□□□□□ -0.21
MDC1-206ENST00000489540 RORCP51449 518 aa13.76□□□□□ -0.21
MDC1-206ENST00000489540 CTF1Q16619 201 aa13.76□□□□□ -0.21
MDC1-206ENST00000489540 C2orf68Q2NKX9 166 aa13.76□□□□□ -0.21
MDC1-206ENST00000489540 SAMD12Q8N8I0 201 aa13.76□□□□□ -0.21
MDC1-206ENST00000489540 C11orf44Q8N8P7 122 aa13.76□□□□□ -0.21
MDC1-206ENST00000489540 OR5AU1Q8NGC0 362 aa13.76□□□□□ -0.21
MDC1-206ENST00000489540 ACOT12Q8WYK0 555 aa13.76□□□□□ -0.21
MDC1-206ENST00000489540 AUNIPQ9H7T9 357 aa13.76□□□□□ -0.21
MDC1-206ENST00000489540 IGKV1D-8A0A087WSZ0 117 aa13.75□□□□□ -0.21
MDC1-206ENST00000489540 OR5H14A6NHG9 310 aa13.75□□□□□ -0.21
MDC1-206ENST00000489540 IGHG2P01859 326 aa13.75□□□□□ -0.21
MDC1-206ENST00000489540 OR8U9P0C7N5 309 aa13.75□□□□□ -0.21
MDC1-206ENST00000489540 F2RL1P55085 397 aa13.75□□□□□ -0.21
MDC1-206ENST00000489540 CNIH2Q6PI25 160 aa13.75□□□□□ -0.21
MDC1-206ENST00000489540 TREML4Q6UXN2 200 aa13.75□□□□□ -0.21
MDC1-206ENST00000489540 OR5AN1Q8NGI8 311 aa13.75□□□□□ -0.21
MDC1-206ENST00000489540 OR8U1Q8NH10 309 aa13.75□□□□□ -0.21
MDC1-206ENST00000489540 CMTM3Q96MX0 182 aa13.75□□□□□ -0.21
MDC1-206ENST00000489540 NAA50Q9GZZ1 169 aaKnown RBP13.75□□□□□ -0.21
MDC1-206ENST00000489540 RBM7Q9Y580 266 aaKnown RBP13.75□□□□□ -0.21
MDC1-206ENST00000489540 PROP1O75360 226 aa13.74□□□□□ -0.21
MDC1-206ENST00000489540 CD28P10747 220 aa13.74□□□□□ -0.21
MDC1-206ENST00000489540 CBX5P45973 191 aa13.74□□□□□ -0.21
MDC1-206ENST00000489540 ACTBP60709 375 aa13.74□□□□□ -0.21
MDC1-206ENST00000489540 MMDQ15546 238 aa13.74□□□□□ -0.21
MDC1-206ENST00000489540 SLC35E3Q7Z769 313 aa13.74□□□□□ -0.21
MDC1-206ENST00000489540 H1FOOQ8IZA3 346 aaPredicted RBP13.74□□□□□ -0.21
MDC1-206ENST00000489540 FAM71E2Q8N5Q1 922 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms