RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 RCC2Q9P258 522 aaKnown RBP8.39□□□□□ -1.07
HDAC6-233ENST00000489352 PLA2G2DQ9UNK4 145 aa8.39□□□□□ -1.07
HDAC6-233ENST00000489352 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.38□□□□□ -1.07
HDAC6-233ENST00000489352 LOC107986453A0A1B0GWG9 222 aa8.38□□□□□ -1.07
HDAC6-233ENST00000489352 OR5H14A6NHG9 310 aa8.38□□□□□ -1.07
HDAC6-233ENST00000489352 OR7C1O76099 320 aaPredicted RBP8.38□□□□□ -1.07
HDAC6-233ENST00000489352 HBZP02008 142 aa8.38□□□□□ -1.07
HDAC6-233ENST00000489352 UBCP0CG48 685 aaKnown RBP8.38□□□□□ -1.07
HDAC6-233ENST00000489352 EPHA2P29317 976 aa8.38□□□□□ -1.07
HDAC6-233ENST00000489352 HMGA2P52926 109 aa8.38□□□□□ -1.07
HDAC6-233ENST00000489352 RHOGP84095 191 aa8.38□□□□□ -1.07
HDAC6-233ENST00000489352 PIGYQ3MUY2 71 aa8.38□□□□□ -1.07
HDAC6-233ENST00000489352 ATAD3CQ5T2N8 411 aa8.38□□□□□ -1.07
HDAC6-233ENST00000489352 ZNF833PQ6ZTB9 187 aa8.38□□□□□ -1.07
HDAC6-233ENST00000489352 EXOSC1Q9Y3B2 195 aaKnown RBP8.38□□□□□ -1.07
HDAC6-233ENST00000489352 WASHC3Q9Y3C0 194 aa8.38□□□□□ -1.07
HDAC6-233ENST00000489352 SAA2-SAA4A0A096LPE2 208 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 ARPC2O15144 300 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 MPPED1O15442 326 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 SULT1B1O43704 296 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 CA1P00915 261 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-233ENST00000489352 SAA2P0DJI9 122 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-233ENST00000489352 APELAP0DMC3 54 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 MED21Q13503 144 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 ALKBH1Q13686 389 aaKnown RBP8.37□□□□□ -1.07
HDAC6-233ENST00000489352 GINS1Q14691 196 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 RSU1Q15404 277 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 ZSCAN26Q16670 478 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 RNF212Q495C1 297 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 SLC25A30Q5SVS4 291 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 SYT6Q5T7P8 510 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-233ENST00000489352 ELP2Q6IA86 826 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 ASCL4Q6XD76 172 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 GPHB5Q86YW7 130 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 ODF3L1Q8IXM7 274 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 LYPD1Q8N2G4 141 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 C6orf223Q8N319 242 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 OR13C9Q8NGT0 318 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 OR1L1Q8NH94 360 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 CHRDL1Q9BU40 450 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 RNF167Q9H6Y7 350 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 AKIP1Q9NQ31 210 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 PTTG2Q9NZH5 202 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 ZNF230Q9UIE0 474 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-233ENST00000489352 NACAE9PAV3 2078 aa8.37□□□□□ -1.07
HDAC6-233ENST00000489352 TMEM213A2RRL7 107 aa8.36□□□□□ -1.07
HDAC6-233ENST00000489352 MT-ND4P03905 459 aa8.36□□□□□ -1.07
HDAC6-233ENST00000489352 CPEP16870 476 aa8.36□□□□□ -1.07
HDAC6-233ENST00000489352 SLC2A5P22732 501 aa8.36□□□□□ -1.07
HDAC6-233ENST00000489352 ZNF585BQ52M93 769 aa8.36□□□□□ -1.07
HDAC6-233ENST00000489352 LAMTOR1Q6IAA8 161 aa8.36□□□□□ -1.07
HDAC6-233ENST00000489352 TRAT1Q6PIZ9 186 aa8.36□□□□□ -1.07
HDAC6-233ENST00000489352 GLDNQ6ZMI3 551 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-233ENST00000489352 SLC35F2Q8IXU6 374 aa8.36□□□□□ -1.07
HDAC6-233ENST00000489352 OR2AK2Q8NG84 335 aa8.36□□□□□ -1.07
HDAC6-233ENST00000489352 MARC2Q969Z3 335 aa8.36□□□□□ -1.07
HDAC6-233ENST00000489352 GPER1Q99527 375 aa8.36□□□□□ -1.07
HDAC6-233ENST00000489352 SIKE1Q9BRV8 207 aa8.36□□□□□ -1.07
HDAC6-233ENST00000489352 ST3GAL6Q9Y274 331 aa8.36□□□□□ -1.07
HDAC6-233ENST00000489352 VPS13BQ7Z7G8 4022 aa8.36□□□□□ -1.07
HDAC6-233ENST00000489352 HMCN2Q8NDA2 5059 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 OR4C46A6NHA9 309 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 FAM90A23PA8MXZ1 464 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 FAM229AH3BQW9 127 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 SPDEFO95238 335 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 MT-ND2P03891 347 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 CD74P04233 296 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 SEMG1P04279 462 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 OR9G9P0C7N8 305 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 NPY1RP25929 384 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 ARL3P36405 182 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 PPP1CCP36873 323 aaKnown RBP8.35□□□□□ -1.07
HDAC6-233ENST00000489352 PPP1R8Q12972 351 aaKnown RBP8.35□□□□□ -1.07
HDAC6-233ENST00000489352 RIPK1Q13546 671 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 KISS1Q15726 138 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 ODF3L2Q3SX64 289 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 TMEM244Q5VVB8 128 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 ZNF497Q6ZNH5 498 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 ZNF767PQ75MW2 155 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 APRG1Q8IVJ8 170 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 SETD9Q8NE22 299 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 OR52L2PQ8NGH6 319 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 OR4K15Q8NH41 348 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 FAM46BQ96A09 425 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 CPNE2Q96FN4 548 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-233ENST00000489352 FAM192AQ9GZU8 254 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 GORASP2Q9H8Y8 452 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 KCNIP1Q9NZI2 227 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 PIPOXQ9P0Z9 390 aa8.35□□□□□ -1.07
HDAC6-233ENST00000489352 IGHV4-28A0A0C4DH34 117 aa8.34□□□□□ -1.07
HDAC6-233ENST00000489352 A8MWP6 167 aa8.34□□□□□ -1.07
HDAC6-233ENST00000489352 H0YJW9 148 aa8.34□□□□□ -1.07
HDAC6-233ENST00000489352 H3BNX3 289 aa8.34□□□□□ -1.07
HDAC6-233ENST00000489352 RAB29O14966 203 aa8.34□□□□□ -1.07
HDAC6-233ENST00000489352 RBMXL2O75526 392 aaKnown RBP8.34□□□□□ -1.07
HDAC6-233ENST00000489352 CT45A6P0DMU7 189 aa8.34□□□□□ -1.07
HDAC6-233ENST00000489352 CT45A5P0DMU8 189 aa8.34□□□□□ -1.07
HDAC6-233ENST00000489352 CT45A7P0DMV0 189 aa8.34□□□□□ -1.07
HDAC6-233ENST00000489352 ADARB1P78563 741 aaKnown RBP8.34□□□□□ -1.07
HDAC6-233ENST00000489352 GNMTQ14749 295 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms