RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 A0A1B0GVX0 72 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 NDUFAF8A1L188 74 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 TMEM150BA6NC51 233 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 ZFP92A6NM28 416 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 KRTAP16-1A8MUX0 517 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 H3BSA7 217 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 SRSF10O75494 262 aaKnown RBP2.35□□□□□ -2.03
PRPF4-203ENST00000488937 MED6O75586 246 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 IGKV1-39P01597 117 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 IGKV1D-39P04432 117 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 SERPINA7P05543 415 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 SCGB1C2P0DMR2 95 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 OR12D1P0DN82 309 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 CNTFRP26992 372 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 CRABP2P29373 138 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 CRIP2P52943 208 aaPredicted RBP2.35□□□□□ -2.03
PRPF4-203ENST00000488937 LINC00313P59037 77 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 RAP1AP62834 184 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 PSPHP78330 225 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 DAZ2Q13117 558 aaKnown RBP2.35□□□□□ -2.03
PRPF4-203ENST00000488937 ELOCQ15369 112 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 RNF212Q495C1 297 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 ABCA11PQ4W5N1 156 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 MPV17L2Q567V2 206 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 RNASE13Q5GAN3 156 aaKnown RBP2.35□□□□□ -2.03
PRPF4-203ENST00000488937 BRMS1LQ5PSV4 323 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 ATAD3CQ5T2N8 411 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 LCE3CQ5T5A8 94 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 TOMM20LQ6UXN7 152 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 DPPA2Q7Z7J5 298 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 DAZ4Q86SG3 579 aaKnown RBP2.35□□□□□ -2.03
PRPF4-203ENST00000488937 DHFR2Q86XF0 187 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 C14orf178Q8N769 122 aaPredicted RBP2.35□□□□□ -2.03
PRPF4-203ENST00000488937 OR8B12Q8NGG6 310 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 LINC01006Q8NI28 216 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 SCGB1C1Q8TD33 95 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 TWIST2Q8WVJ9 160 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 PYURFQ96I23 114 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 ZNF414Q96IQ9 312 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 CDX2Q99626 313 aaPredicted RBP2.35□□□□□ -2.03
PRPF4-203ENST00000488937 SOSTQ9BQB4 213 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 AIF1LQ9BQI0 150 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 ANAPC13Q9BS18 74 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 ULBP3Q9BZM4 244 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 FAM107BQ9H098 131 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 GTSF1LQ9H1H1 148 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 PARVBQ9HBI1 364 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 DAZ1Q9NQZ3 744 aaKnown RBP2.35□□□□□ -2.03
PRPF4-203ENST00000488937 DAZ3Q9NR90 486 aaKnown RBP2.35□□□□□ -2.03
PRPF4-203ENST00000488937 C8orf17Q9NRJ1 99 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 RSL24D1Q9UHA3 163 aaKnown RBP2.35□□□□□ -2.03
PRPF4-203ENST00000488937 PRNDQ9UKY0 176 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 HSPB11Q9Y547 144 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 PCYT1BQ9Y5K3 369 aaPredicted RBP2.35□□□□□ -2.03
PRPF4-203ENST00000488937 ZNF706Q9Y5V0 76 aaPredicted RBP2.35□□□□□ -2.03
PRPF4-203ENST00000488937 DSCAML1Q8TD84 2053 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 RALGAPA2Q2PPJ7 1873 aa2.35□□□□□ -2.03
PRPF4-203ENST00000488937 SCN10AQ9Y5Y9 1956 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 NUP205Q92621 2012 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 ANKRD12Q6UB98 2062 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 LOC102724200A0A096LPH7 203 aaPredicted RBP2.34□□□□□ -2.03
PRPF4-203ENST00000488937 TMED7-TICAM2A0A0A6YYA0 188 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 IGHV5-51A0A0C4DH38 117 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 IGHV7-4-1A0A0J9YVY3 117 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 A0A1W2PRE2 83 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 OR5H1A6NKK0 313 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 C9JQL5 133 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 APOMO95445 188 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 INSP01308 110 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 LTAP01374 205 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 IGLV3-27P01718 113 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 RNF224P0DH78 156 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 IGHV1-8P0DP01 117 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 ERP29P30040 261 aaKnown RBP2.34□□□□□ -2.03
PRPF4-203ENST00000488937 CDC42P60953 191 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 SNRPD2P62316 118 aaKnown RBP2.34□□□□□ -2.03
PRPF4-203ENST00000488937 TNFAIP6P98066 277 aaPredicted RBP2.34□□□□□ -2.03
PRPF4-203ENST00000488937 IL15RAQ13261 267 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 CCDC58Q4VC31 144 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 C9orf129Q5T035 196 aaKnown RBP2.34□□□□□ -2.03
PRPF4-203ENST00000488937 MRPL2Q5T653 305 aaKnown RBP2.34□□□□□ -2.03
PRPF4-203ENST00000488937 MORN3Q6PF18 240 aaPredicted RBP2.34□□□□□ -2.03
PRPF4-203ENST00000488937 GOLT1AQ6ZVE7 132 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 ATP5L2Q7Z4Y8 100 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 OSR2Q8N2R0 312 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 C12orf45Q8N5I9 185 aaPredicted RBP2.34□□□□□ -2.03
PRPF4-203ENST00000488937 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.34□□□□□ -2.03
PRPF4-203ENST00000488937 OR5H2Q8NGV7 314 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 APOBEC3DQ96AK3 386 aaPredicted RBP2.34□□□□□ -2.03
PRPF4-203ENST00000488937 C16orf74Q96GX8 76 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 SLC25A44Q96H78 314 aaPredicted RBP2.34□□□□□ -2.03
PRPF4-203ENST00000488937 TBX5Q99593 518 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 THTPAQ9BU02 230 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 MS4A8Q9BY19 250 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 SH3BGRL3Q9H299 93 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 UQCC1Q9NVA1 299 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 ZNF492Q9P255 531 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 SS18L2Q9UHA2 77 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 NUFIP1Q9UHK0 495 aaKnown RBP2.34□□□□□ -2.03
PRPF4-203ENST00000488937 TBX21Q9UL17 535 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms