RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 HSPA12AO43301 675 aa13.97□□□□□ -0.17
ITGB1-215ENST00000488494 SCTP09683 121 aa13.97□□□□□ -0.17
ITGB1-215ENST00000488494 SOX6P35712 828 aa13.97□□□□□ -0.17
ITGB1-215ENST00000488494 ACTBP60709 375 aa13.97□□□□□ -0.17
ITGB1-215ENST00000488494 ZNF773Q6PK81 442 aa13.97□□□□□ -0.17
ITGB1-215ENST00000488494 FAM131AQ6UXB0 335 aa13.97□□□□□ -0.17
ITGB1-215ENST00000488494 COMMD1Q8N668 190 aa13.97□□□□□ -0.17
ITGB1-215ENST00000488494 PHF21AQ96BD5 680 aa13.97□□□□□ -0.17
ITGB1-215ENST00000488494 RAB3CQ96E17 227 aa13.97□□□□□ -0.17
ITGB1-215ENST00000488494 ZNF107Q9UII5 783 aaPredicted RBP13.97□□□□□ -0.17
ITGB1-215ENST00000488494 NUDT19A8MXV4 375 aa13.96□□□□□ -0.17
ITGB1-215ENST00000488494 RAB29O14966 203 aa13.96□□□□□ -0.17
ITGB1-215ENST00000488494 RRP9O43818 475 aaKnown RBP13.96□□□□□ -0.17
ITGB1-215ENST00000488494 IGLL1P15814 213 aa13.96□□□□□ -0.17
ITGB1-215ENST00000488494 ZBTB25P24278 435 aa13.96□□□□□ -0.17
ITGB1-215ENST00000488494 CNTFRP26992 372 aa13.96□□□□□ -0.17
ITGB1-215ENST00000488494 MRPS15P82914 257 aaKnown RBP13.96□□□□□ -0.17
ITGB1-215ENST00000488494 ETV3LQ6ZN32 361 aa13.96□□□□□ -0.17
ITGB1-215ENST00000488494 C18orf65Q6ZTR6 163 aa13.96□□□□□ -0.17
ITGB1-215ENST00000488494 KLHL30-AS1Q8NEE0 82 aa13.96□□□□□ -0.17
ITGB1-215ENST00000488494 ABHD14BQ96IU4 210 aa13.96□□□□□ -0.17
ITGB1-215ENST00000488494 ZNF251Q9BRH9 671 aa13.96□□□□□ -0.17
ITGB1-215ENST00000488494 PIPOXQ9P0Z9 390 aa13.96□□□□□ -0.17
ITGB1-215ENST00000488494 KCNK7Q9Y2U2 307 aa13.96□□□□□ -0.17
ITGB1-215ENST00000488494 A0A075B6Q4 140 aa13.95□□□□□ -0.18
ITGB1-215ENST00000488494 IGKV1-6A0A0C4DH72 117 aa13.95□□□□□ -0.18
ITGB1-215ENST00000488494 NBR2O15453 112 aa13.95□□□□□ -0.18
ITGB1-215ENST00000488494 CD3GP09693 182 aa13.95□□□□□ -0.18
ITGB1-215ENST00000488494 GADD45AP24522 165 aa13.95□□□□□ -0.18
ITGB1-215ENST00000488494 CEACAM6P40199 344 aa13.95□□□□□ -0.18
ITGB1-215ENST00000488494 C8orf86Q6ZUL3 223 aa13.95□□□□□ -0.18
ITGB1-215ENST00000488494 OR10R2Q8NGX6 335 aa13.95□□□□□ -0.18
ITGB1-215ENST00000488494 EDARADDQ8WWZ3 215 aa13.95□□□□□ -0.18
ITGB1-215ENST00000488494 RITA1Q96K30 269 aa13.95□□□□□ -0.18
ITGB1-215ENST00000488494 GON7Q9BXV9 100 aa13.95□□□□□ -0.18
ITGB1-215ENST00000488494 YTHDF1Q9BYJ9 559 aaKnown RBP13.95□□□□□ -0.18
ITGB1-215ENST00000488494 C11orf54Q9H0W9 315 aaPredicted RBP13.95□□□□□ -0.18
ITGB1-215ENST00000488494 TXNL4BQ9NX01 149 aaKnown RBP13.95□□□□□ -0.18
ITGB1-215ENST00000488494 STUB1Q9UNE7 303 aa13.95□□□□□ -0.18
ITGB1-215ENST00000488494 DNAH3Q8TD57 4116 aa13.95□□□□□ -0.18
ITGB1-215ENST00000488494 NOTCH3Q9UM47 2321 aa13.95□□□□□ -0.18
ITGB1-215ENST00000488494 TRDCB7Z8K6 153 aa13.94□□□□□ -0.18
ITGB1-215ENST00000488494 MFNGO00587 321 aa13.94□□□□□ -0.18
ITGB1-215ENST00000488494 ITGB1BP1O14713 200 aa13.94□□□□□ -0.18
ITGB1-215ENST00000488494 FCGR3AP08637 254 aa13.94□□□□□ -0.18
ITGB1-215ENST00000488494 HIST1H1DP16402 221 aaKnown RBP13.94□□□□□ -0.18
ITGB1-215ENST00000488494 GNB3P16520 340 aa13.94□□□□□ -0.18
ITGB1-215ENST00000488494 RAB6AP20340 208 aa13.94□□□□□ -0.18
ITGB1-215ENST00000488494 VDAC1P21796 283 aa13.94□□□□□ -0.18
ITGB1-215ENST00000488494 FGF9P31371 208 aaPredicted RBP13.94□□□□□ -0.18
ITGB1-215ENST00000488494 TEX38Q6PEX7 206 aa13.94□□□□□ -0.18
ITGB1-215ENST00000488494 GLDNQ6ZMI3 551 aaPredicted RBP13.94□□□□□ -0.18
ITGB1-215ENST00000488494 LCNL1Q6ZST4 164 aa13.94□□□□□ -0.18
ITGB1-215ENST00000488494 LINC00482Q8N8I6 264 aa13.94□□□□□ -0.18
ITGB1-215ENST00000488494 WFDC9Q8NEX5 89 aa13.94□□□□□ -0.18
ITGB1-215ENST00000488494 AGMATQ9BSE5 352 aa13.94□□□□□ -0.18
ITGB1-215ENST00000488494 OR5H14A6NHG9 310 aa13.93□□□□□ -0.18
ITGB1-215ENST00000488494 HLA-DRB1P01911 266 aa13.93□□□□□ -0.18
ITGB1-215ENST00000488494 RPLP1P05386 114 aaKnown RBP13.93□□□□□ -0.18
ITGB1-215ENST00000488494 CT45A6P0DMU7 189 aa13.93□□□□□ -0.18
ITGB1-215ENST00000488494 CT45A5P0DMU8 189 aa13.93□□□□□ -0.18
ITGB1-215ENST00000488494 CT45A7P0DMV0 189 aa13.93□□□□□ -0.18
ITGB1-215ENST00000488494 CFHR3Q02985 330 aa13.93□□□□□ -0.18
ITGB1-215ENST00000488494 FOXE3Q13461 319 aa13.93□□□□□ -0.18
ITGB1-215ENST00000488494 PNLIPRP3Q17RR3 467 aa13.93□□□□□ -0.18
ITGB1-215ENST00000488494 CXorf66Q5JRM2 361 aaPredicted RBP13.93□□□□□ -0.18
ITGB1-215ENST00000488494 MAFIPQ8WZ33 124 aa13.93□□□□□ -0.18
ITGB1-215ENST00000488494 RCC1LQ96I51 464 aaKnown RBP13.93□□□□□ -0.18
ITGB1-215ENST00000488494 PARP11Q9NR21 331 aa13.93□□□□□ -0.18
ITGB1-215ENST00000488494 ZFP57Q9NU63 452 aa13.93□□□□□ -0.18
ITGB1-215ENST00000488494 NECAP2Q9NVZ3 263 aa13.93□□□□□ -0.18
ITGB1-215ENST00000488494 NOTOA8MTQ0 251 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 H0YJW9 148 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 RAB27BO00194 218 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 ATP6V0E1O15342 81 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 FABP7O15540 132 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 IGF1P05019 195 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 THBS3P49746 956 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 KIR2DS1Q14954 304 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 C5orf64Q2M2E5 130 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 FOXB2Q5VYV0 432 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 REC114Q7Z4M0 266 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 ZNF695Q8IW36 515 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 MRPL41Q8IXM3 137 aaKnown RBP13.92□□□□□ -0.18
ITGB1-215ENST00000488494 OR4A4PQ8NGN8 299 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 PTX4Q96A99 478 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 KCTD7Q96MP8 289 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 ATG5Q9H1Y0 275 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 RDH8Q9NYR8 311 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 KIAA1456Q9P272 454 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 ZNF580Q9UK33 172 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 RNF150Q9ULK6 438 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 SSR3Q9UNL2 185 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 RRP15Q9Y3B9 282 aaKnown RBP13.92□□□□□ -0.18
ITGB1-215ENST00000488494 WASHC3Q9Y3C0 194 aa13.92□□□□□ -0.18
ITGB1-215ENST00000488494 METTL21EPA6NDL7 271 aa13.91□□□□□ -0.18
ITGB1-215ENST00000488494 H7C2Y5 167 aa13.91□□□□□ -0.18
ITGB1-215ENST00000488494 BET1O15155 118 aa13.91□□□□□ -0.18
ITGB1-215ENST00000488494 NDUFA3O95167 84 aa13.91□□□□□ -0.18
ITGB1-215ENST00000488494 IGHG4P01861 327 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms