RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 RAB18Q9NP72 206 aa12.69□□□□□ -0.38
C9orf3-219ENST00000488186 VPREB3Q9UKI3 123 aa12.69□□□□□ -0.38
C9orf3-219ENST00000488186 RNF150Q9ULK6 438 aa12.69□□□□□ -0.38
C9orf3-219ENST00000488186 A3GALT2U3KPV4 340 aa12.69□□□□□ -0.38
C9orf3-219ENST00000488186 RNF212BA8MTL3 300 aa12.68□□□□□ -0.38
C9orf3-219ENST00000488186 J3QRK9 145 aa12.68□□□□□ -0.38
C9orf3-219ENST00000488186 RBBP9O75884 186 aa12.68□□□□□ -0.38
C9orf3-219ENST00000488186 OR8U9P0C7N5 309 aa12.68□□□□□ -0.38
C9orf3-219ENST00000488186 FAM106CPP0CH98 169 aa12.68□□□□□ -0.38
C9orf3-219ENST00000488186 TNFSF8P32971 234 aa12.68□□□□□ -0.38
C9orf3-219ENST00000488186 GPR12P47775 334 aa12.68□□□□□ -0.38
C9orf3-219ENST00000488186 DYNLT3P51808 116 aa12.68□□□□□ -0.38
C9orf3-219ENST00000488186 ACTG1P63261 375 aa12.68□□□□□ -0.38
C9orf3-219ENST00000488186 ZNF816Q0VGE8 651 aaPredicted RBP12.68□□□□□ -0.38
C9orf3-219ENST00000488186 HES1Q14469 280 aa12.68□□□□□ -0.38
C9orf3-219ENST00000488186 PYHIN1Q6K0P9 492 aa12.68□□□□□ -0.38
C9orf3-219ENST00000488186 OR5AP2Q8NGF4 316 aa12.68□□□□□ -0.38
C9orf3-219ENST00000488186 OR8U1Q8NH10 309 aa12.68□□□□□ -0.38
C9orf3-219ENST00000488186 GPX8Q8TED1 209 aa12.68□□□□□ -0.38
C9orf3-219ENST00000488186 RTN4IP1Q8WWV3 396 aaPredicted RBP12.68□□□□□ -0.38
C9orf3-219ENST00000488186 ABHD14BQ96IU4 210 aa12.68□□□□□ -0.38
C9orf3-219ENST00000488186 BATF3Q9NR55 127 aa12.68□□□□□ -0.38
C9orf3-219ENST00000488186 IGHV1-3A0A0C4DH29 117 aa12.67□□□□□ -0.38
C9orf3-219ENST00000488186 FAM181BA6NEQ2 426 aa12.67□□□□□ -0.38
C9orf3-219ENST00000488186 TIMM23O14925 209 aa12.67□□□□□ -0.38
C9orf3-219ENST00000488186 LANCL1O43813 399 aa12.67□□□□□ -0.38
C9orf3-219ENST00000488186 GPR137BO60478 399 aa12.67□□□□□ -0.38
C9orf3-219ENST00000488186 OR5H8P0DN80 308 aa12.67□□□□□ -0.38
C9orf3-219ENST00000488186 NFYAP23511 347 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-219ENST00000488186 CD24P25063 80 aa12.67□□□□□ -0.38
C9orf3-219ENST00000488186 RCVRNP35243 200 aa12.67□□□□□ -0.38
C9orf3-219ENST00000488186 TAS2R46P59540 309 aa12.67□□□□□ -0.38
C9orf3-219ENST00000488186 MRPS10P82664 201 aaKnown RBP12.67□□□□□ -0.38
C9orf3-219ENST00000488186 DIAPH2-AS1Q14236 149 aa12.67□□□□□ -0.38
C9orf3-219ENST00000488186 CDK10Q15131 360 aa12.67□□□□□ -0.38
C9orf3-219ENST00000488186 FOXB2Q5VYV0 432 aa12.67□□□□□ -0.38
C9orf3-219ENST00000488186 FAM131AQ6UXB0 335 aa12.67□□□□□ -0.38
C9orf3-219ENST00000488186 DRAM1Q8N682 238 aa12.67□□□□□ -0.38
C9orf3-219ENST00000488186 OR5H2Q8NGV7 314 aa12.67□□□□□ -0.38
C9orf3-219ENST00000488186 OR56B4Q8NH76 319 aa12.67□□□□□ -0.38
C9orf3-219ENST00000488186 SPATA3Q8NHX4 192 aa12.67□□□□□ -0.38
C9orf3-219ENST00000488186 ABHD1Q96SE0 405 aa12.67□□□□□ -0.38
C9orf3-219ENST00000488186 TOLLIPQ9H0E2 274 aa12.67□□□□□ -0.38
C9orf3-219ENST00000488186 PARP12Q9H0J9 701 aaKnown RBP12.67□□□□□ -0.38
C9orf3-219ENST00000488186 SAA2-SAA4A0A096LPE2 208 aa12.66□□□□□ -0.38
C9orf3-219ENST00000488186 PMP2P02689 132 aa12.66□□□□□ -0.38
C9orf3-219ENST00000488186 SAA2P0DJI9 122 aaPredicted RBP12.66□□□□□ -0.38
C9orf3-219ENST00000488186 HLA-DMAP28067 261 aa12.66□□□□□ -0.38
C9orf3-219ENST00000488186 FCGR2CP31995 323 aa12.66□□□□□ -0.38
C9orf3-219ENST00000488186 LUMP51884 338 aaPredicted RBP12.66□□□□□ -0.38
C9orf3-219ENST00000488186 ZNF137PP52743 207 aa12.66□□□□□ -0.38
C9orf3-219ENST00000488186 ACTBP60709 375 aa12.66□□□□□ -0.38
C9orf3-219ENST00000488186 DHRS7BQ6IAN0 325 aaPredicted RBP12.66□□□□□ -0.38
C9orf3-219ENST00000488186 LIAT1Q6ZQX7 453 aa12.66□□□□□ -0.38
C9orf3-219ENST00000488186 H1FOOQ8IZA3 346 aaPredicted RBP12.66□□□□□ -0.38
C9orf3-219ENST00000488186 OR52I2Q8NH67 350 aa12.66□□□□□ -0.38
C9orf3-219ENST00000488186 PIFOQ8TCI5 191 aa12.66□□□□□ -0.38
C9orf3-219ENST00000488186 SNAPC3Q92966 411 aa12.66□□□□□ -0.38
C9orf3-219ENST00000488186 ST6GALNAC6Q969X2 333 aa12.66□□□□□ -0.38
C9orf3-219ENST00000488186 MDFIQ99750 246 aa12.66□□□□□ -0.38
C9orf3-219ENST00000488186 IFI27L2Q9H2X8 130 aa12.66□□□□□ -0.38
C9orf3-219ENST00000488186 EHFQ9NZC4 300 aa12.66□□□□□ -0.38
C9orf3-219ENST00000488186 TCF19Q9Y242 345 aa12.66□□□□□ -0.38
C9orf3-219ENST00000488186 STAB1Q9NY15 2570 aa12.65□□□□□ -0.38
C9orf3-219ENST00000488186 A0A1W2PPI3 338 aa12.65□□□□□ -0.38
C9orf3-219ENST00000488186 GABARAPH6UMI1 98 aa12.65□□□□□ -0.38
C9orf3-219ENST00000488186 NAT1P18440 290 aa12.65□□□□□ -0.38
C9orf3-219ENST00000488186 TSPAN5P62079 268 aa12.65□□□□□ -0.38
C9orf3-219ENST00000488186 HNF4GQ14541 408 aa12.65□□□□□ -0.38
C9orf3-219ENST00000488186 KRTAP24-1Q3LI83 254 aa12.65□□□□□ -0.38
C9orf3-219ENST00000488186 RPL39P5Q59GN2 51 aa12.65□□□□□ -0.38
C9orf3-219ENST00000488186 SPANXN2Q5MJ10 180 aa12.65□□□□□ -0.38
C9orf3-219ENST00000488186 FAM71F2Q6NXP2 309 aa12.65□□□□□ -0.38
C9orf3-219ENST00000488186 TMEM219Q86XT9 240 aa12.65□□□□□ -0.38
C9orf3-219ENST00000488186 THNSL2Q86YJ6 484 aa12.65□□□□□ -0.38
C9orf3-219ENST00000488186 AKR1E2Q96JD6 320 aa12.65□□□□□ -0.38
C9orf3-219ENST00000488186 AGMATQ9BSE5 352 aa12.65□□□□□ -0.38
C9orf3-219ENST00000488186 OR2D2Q9H210 308 aa12.65□□□□□ -0.38
C9orf3-219ENST00000488186 OR2W1Q9Y3N9 320 aa12.65□□□□□ -0.38
C9orf3-219ENST00000488186 IGHV3-72A0A0B4J1Y9 119 aa12.64□□□□□ -0.39
C9orf3-219ENST00000488186 A6NDX4 124 aa12.64□□□□□ -0.39
C9orf3-219ENST00000488186 A6NHS1 94 aa12.64□□□□□ -0.39
C9orf3-219ENST00000488186 SLC22A5O76082 557 aa12.64□□□□□ -0.39
C9orf3-219ENST00000488186 IGKV1D-33P01593 117 aa12.64□□□□□ -0.39
C9orf3-219ENST00000488186 IGKV1-33P01594 117 aa12.64□□□□□ -0.39
C9orf3-219ENST00000488186 IFNA6P05013 189 aa12.64□□□□□ -0.39
C9orf3-219ENST00000488186 SNRNP70P08621 437 aaKnown RBP12.64□□□□□ -0.39
C9orf3-219ENST00000488186 TMEM11P17152 192 aa12.64□□□□□ -0.39
C9orf3-219ENST00000488186 CD1BP29016 333 aa12.64□□□□□ -0.39
C9orf3-219ENST00000488186 RFX2P48378 723 aa12.64□□□□□ -0.39
C9orf3-219ENST00000488186 RPL15P61313 204 aaKnown RBP12.64□□□□□ -0.39
C9orf3-219ENST00000488186 HERV-K104P61576 105 aa12.64□□□□□ -0.39
C9orf3-219ENST00000488186 ACTBL2Q562R1 376 aa12.64□□□□□ -0.39
C9orf3-219ENST00000488186 PYDC2Q56P42 97 aa12.64□□□□□ -0.39
C9orf3-219ENST00000488186 ZNF833PQ6ZTB9 187 aa12.64□□□□□ -0.39
C9orf3-219ENST00000488186 ODF3L1Q8IXM7 274 aa12.64□□□□□ -0.39
C9orf3-219ENST00000488186 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.64□□□□□ -0.39
C9orf3-219ENST00000488186 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.64□□□□□ -0.39
C9orf3-219ENST00000488186 KLK11Q9UBX7 282 aa12.64□□□□□ -0.39
C9orf3-219ENST00000488186 MTFP1Q9UDX5 166 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms