RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 LANCL1O43813 399 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 RPLP1P05386 114 aaKnown RBP9.66□□□□□ -0.86
SDC3-204ENST00000487984 VSIG8P0DPA2 414 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 SLC6A1P30531 599 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 S100A5P33763 92 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 PPP1CCP36873 323 aaKnown RBP9.66□□□□□ -0.86
SDC3-204ENST00000487984 MYCNOSP40205 109 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 F2RL1P55085 397 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 EGFEM1PQ0D2K5 195 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 LSAMPQ13449 338 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 PNLIPRP3Q17RR3 467 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 MORN2Q502X0 79 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 STEAP3Q658P3 488 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 OR10K2Q6IF99 312 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 TEX38Q6PEX7 206 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 LCNL1Q6ZST4 164 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 ZNF554Q86TJ5 538 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 ZNF695Q8IW36 515 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 OR8H1Q8NGG4 311 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 OR52L2PQ8NGH6 319 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 P2RX4Q99571 388 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 RASL11BQ9BPW5 248 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 HSPB9Q9BQS6 159 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 ABHD14AQ9BUJ0 271 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 CST11Q9H112 138 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 KCNIP1Q9NZI2 227 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 CLEC2LP0C7M8 214 aa9.65□□□□□ -0.86
SDC3-204ENST00000487984 UBBP0CG47 229 aa9.65□□□□□ -0.86
SDC3-204ENST00000487984 CHATP28329 748 aa9.65□□□□□ -0.86
SDC3-204ENST00000487984 C1orf100Q5SVJ3 147 aa9.65□□□□□ -0.86
SDC3-204ENST00000487984 IDNKQ5T6J7 187 aa9.65□□□□□ -0.86
SDC3-204ENST00000487984 SFXN4Q6P4A7 337 aa9.65□□□□□ -0.86
SDC3-204ENST00000487984 RAX2Q96IS3 184 aa9.65□□□□□ -0.86
SDC3-204ENST00000487984 DUX3Q96PT4 197 aa9.65□□□□□ -0.86
SDC3-204ENST00000487984 NEDD4LQ96PU5 975 aa9.65□□□□□ -0.86
SDC3-204ENST00000487984 TSC22D3Q99576 134 aa9.65□□□□□ -0.86
SDC3-204ENST00000487984 SULT4A1Q9BR01 284 aa9.65□□□□□ -0.86
SDC3-204ENST00000487984 GON7Q9BXV9 100 aa9.65□□□□□ -0.86
SDC3-204ENST00000487984 GPR61Q9BZJ8 451 aa9.65□□□□□ -0.86
SDC3-204ENST00000487984 SLIRPQ9GZT3 109 aaKnown RBP9.65□□□□□ -0.86
SDC3-204ENST00000487984 KCNK15Q9H427 330 aa9.65□□□□□ -0.86
SDC3-204ENST00000487984 PLGRKTQ9HBL7 147 aa9.65□□□□□ -0.86
SDC3-204ENST00000487984 ABRACLQ9P1F3 81 aa9.65□□□□□ -0.86
SDC3-204ENST00000487984 JPT1Q9UK76 154 aa9.65□□□□□ -0.86
SDC3-204ENST00000487984 ADAM30Q9UKF2 790 aa9.65□□□□□ -0.86
SDC3-204ENST00000487984 AK6Q9Y3D8 172 aaKnown RBP9.65□□□□□ -0.86
SDC3-204ENST00000487984 SHISA3A0PJX4 238 aa9.64□□□□□ -0.87
SDC3-204ENST00000487984 IFITM5A6NNB3 132 aa9.64□□□□□ -0.87
SDC3-204ENST00000487984 SCAND1P57086 179 aa9.64□□□□□ -0.87
SDC3-204ENST00000487984 RPS27AP62979 156 aaKnown RBP9.64□□□□□ -0.87
SDC3-204ENST00000487984 HTD2P86397 168 aa9.64□□□□□ -0.87
SDC3-204ENST00000487984 CFHR3Q02985 330 aa9.64□□□□□ -0.87
SDC3-204ENST00000487984 UNC119Q13432 240 aa9.64□□□□□ -0.87
SDC3-204ENST00000487984 FOXE3Q13461 319 aa9.64□□□□□ -0.87
SDC3-204ENST00000487984 MMDQ15546 238 aa9.64□□□□□ -0.87
SDC3-204ENST00000487984 CXorf66Q5JRM2 361 aaPredicted RBP9.64□□□□□ -0.87
SDC3-204ENST00000487984 C6orf201Q7Z4U5 140 aa9.64□□□□□ -0.87
SDC3-204ENST00000487984 ODF3L1Q8IXM7 274 aa9.64□□□□□ -0.87
SDC3-204ENST00000487984 RNF152Q8N8N0 203 aa9.64□□□□□ -0.87
SDC3-204ENST00000487984 OR6M1Q8NGM8 313 aa9.64□□□□□ -0.87
SDC3-204ENST00000487984 DPF1Q92782 380 aa9.64□□□□□ -0.87
SDC3-204ENST00000487984 NICN1Q9BSH3 213 aa9.64□□□□□ -0.87
SDC3-204ENST00000487984 FAAP24Q9BTP7 215 aa9.64□□□□□ -0.87
SDC3-204ENST00000487984 MCRIP2Q9BUT9 160 aaKnown RBP9.64□□□□□ -0.87
SDC3-204ENST00000487984 TMEM59Q9BXS4 323 aa9.64□□□□□ -0.87
SDC3-204ENST00000487984 MRPL20Q9BYC9 149 aaKnown RBP9.64□□□□□ -0.87
SDC3-204ENST00000487984 C6orf62Q9GZU0 229 aaPredicted RBP9.64□□□□□ -0.87
SDC3-204ENST00000487984 DAPK2Q9UIK4 370 aa9.64□□□□□ -0.87
SDC3-204ENST00000487984 CCL24O00175 119 aa9.63□□□□□ -0.87
SDC3-204ENST00000487984 SLC17A2O00624 439 aa9.63□□□□□ -0.87
SDC3-204ENST00000487984 YPEL1O60688 119 aa9.63□□□□□ -0.87
SDC3-204ENST00000487984 IGHG4P01861 327 aa9.63□□□□□ -0.87
SDC3-204ENST00000487984 IGF1P05019 195 aa9.63□□□□□ -0.87
SDC3-204ENST00000487984 ELANEP08246 267 aa9.63□□□□□ -0.87
SDC3-204ENST00000487984 SLC2A2P11168 524 aaPredicted RBP9.63□□□□□ -0.87
SDC3-204ENST00000487984 VDAC1P21796 283 aa9.63□□□□□ -0.87
SDC3-204ENST00000487984 HTR2CP28335 458 aa9.63□□□□□ -0.87
SDC3-204ENST00000487984 OR3A3P47888 321 aa9.63□□□□□ -0.87
SDC3-204ENST00000487984 QRFPP83859 136 aa9.63□□□□□ -0.87
SDC3-204ENST00000487984 HMGN3Q15651 99 aa9.63□□□□□ -0.87
SDC3-204ENST00000487984 RAB11BQ15907 218 aa9.63□□□□□ -0.87
SDC3-204ENST00000487984 DEFB136Q30KP8 78 aa9.63□□□□□ -0.87
SDC3-204ENST00000487984 KCNG3Q8TAE7 436 aa9.63□□□□□ -0.87
SDC3-204ENST00000487984 GALMQ96C23 342 aa9.63□□□□□ -0.87
SDC3-204ENST00000487984 RITA1Q96K30 269 aa9.63□□□□□ -0.87
SDC3-204ENST00000487984 YPEL2Q96QA6 119 aa9.63□□□□□ -0.87
SDC3-204ENST00000487984 NABP2Q9BQ15 211 aa9.63□□□□□ -0.87
SDC3-204ENST00000487984 TM2D1Q9BX74 207 aa9.63□□□□□ -0.87
SDC3-204ENST00000487984 NXF2Q9GZY0 626 aaKnown RBP9.63□□□□□ -0.87
SDC3-204ENST00000487984 STEAP1Q9UHE8 339 aa9.63□□□□□ -0.87
SDC3-204ENST00000487984 ZNF107Q9UII5 783 aaPredicted RBP9.63□□□□□ -0.87
SDC3-204ENST00000487984 SAA2-SAA4A0A096LPE2 208 aa9.62□□□□□ -0.87
SDC3-204ENST00000487984 A0A0A6YYD4 124 aa9.62□□□□□ -0.87
SDC3-204ENST00000487984 SMIM30A4D0T7 59 aa9.62□□□□□ -0.87
SDC3-204ENST00000487984 TMEM14DPA8MWL7 114 aa9.62□□□□□ -0.87
SDC3-204ENST00000487984 RGS5O15539 181 aa9.62□□□□□ -0.87
SDC3-204ENST00000487984 RGS11O94810 467 aa9.62□□□□□ -0.87
SDC3-204ENST00000487984 NAPSAO96009 420 aa9.62□□□□□ -0.87
SDC3-204ENST00000487984 SAA2P0DJI9 122 aaPredicted RBP9.62□□□□□ -0.87
SDC3-204ENST00000487984 CD37P11049 281 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms