RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 FABP7O15540 132 aa13.51□□□□□ -0.25
HMG20B-212ENST00000487894 HSPA12AO43301 675 aa13.51□□□□□ -0.25
HMG20B-212ENST00000487894 CEACAM6P40199 344 aa13.51□□□□□ -0.25
HMG20B-212ENST00000487894 ARFRP1Q13795 201 aa13.51□□□□□ -0.25
HMG20B-212ENST00000487894 ARL6IP1Q15041 203 aa13.51□□□□□ -0.25
HMG20B-212ENST00000487894 IDNKQ5T6J7 187 aa13.51□□□□□ -0.25
HMG20B-212ENST00000487894 Q8N9W7 124 aa13.51□□□□□ -0.25
HMG20B-212ENST00000487894 OR4A4PQ8NGN8 299 aa13.51□□□□□ -0.25
HMG20B-212ENST00000487894 EDARADDQ8WWZ3 215 aa13.51□□□□□ -0.25
HMG20B-212ENST00000487894 AGMATQ9BSE5 352 aa13.51□□□□□ -0.25
HMG20B-212ENST00000487894 C11orf54Q9H0W9 315 aaPredicted RBP13.51□□□□□ -0.25
HMG20B-212ENST00000487894 MMP27Q9H306 513 aa13.51□□□□□ -0.25
HMG20B-212ENST00000487894 PLSCR3Q9NRY6 295 aa13.51□□□□□ -0.25
HMG20B-212ENST00000487894 PIPOXQ9P0Z9 390 aa13.51□□□□□ -0.25
HMG20B-212ENST00000487894 ZNF230Q9UIE0 474 aaPredicted RBP13.51□□□□□ -0.25
HMG20B-212ENST00000487894 ETV7Q9Y603 341 aa13.51□□□□□ -0.25
HMG20B-212ENST00000487894 RAB29O14966 203 aa13.5□□□□□ -0.25
HMG20B-212ENST00000487894 SCGNO76038 276 aa13.5□□□□□ -0.25
HMG20B-212ENST00000487894 GSTT2P0CG29 244 aa13.5□□□□□ -0.25
HMG20B-212ENST00000487894 GSTT2BP0CG30 244 aa13.5□□□□□ -0.25
HMG20B-212ENST00000487894 LSM3P62310 102 aaKnown RBP13.5□□□□□ -0.25
HMG20B-212ENST00000487894 KIR2DS1Q14954 304 aa13.5□□□□□ -0.25
HMG20B-212ENST00000487894 CDNFQ49AH0 187 aa13.5□□□□□ -0.25
HMG20B-212ENST00000487894 RPL39P5Q59GN2 51 aa13.5□□□□□ -0.25
HMG20B-212ENST00000487894 IGSF11Q5DX21 431 aa13.5□□□□□ -0.25
HMG20B-212ENST00000487894 ABHD14BQ96IU4 210 aa13.5□□□□□ -0.25
HMG20B-212ENST00000487894 TOLLIPQ9H0E2 274 aa13.5□□□□□ -0.25
HMG20B-212ENST00000487894 IGKV1D-8A0A087WSZ0 117 aa13.49□□□□□ -0.25
HMG20B-212ENST00000487894 NCBP2LA6PVI3 153 aaKnown RBP13.49□□□□□ -0.25
HMG20B-212ENST00000487894 ADARB2-AS1A8MUL3 147 aa13.49□□□□□ -0.25
HMG20B-212ENST00000487894 IGHG2P01859 326 aa13.49□□□□□ -0.25
HMG20B-212ENST00000487894 GSTP1P09211 210 aaKnown RBP13.49□□□□□ -0.25
HMG20B-212ENST00000487894 CSF1P09603 554 aa13.49□□□□□ -0.25
HMG20B-212ENST00000487894 SRSF7Q16629 238 aaKnown RBP eCLIP13.49□□□□□ -0.25
HMG20B-212ENST00000487894 ZNF260Q3ZCT1 412 aa13.49□□□□□ -0.25
HMG20B-212ENST00000487894 HACD4Q5VWC8 232 aa13.49□□□□□ -0.25
HMG20B-212ENST00000487894 C10orf99Q6UWK7 81 aa13.49□□□□□ -0.25
HMG20B-212ENST00000487894 Q6ZS49 121 aa13.49□□□□□ -0.25
HMG20B-212ENST00000487894 FAM71E2Q8N5Q1 922 aa13.49□□□□□ -0.25
HMG20B-212ENST00000487894 OR5AU1Q8NGC0 362 aa13.49□□□□□ -0.25
HMG20B-212ENST00000487894 OR8H1Q8NGG4 311 aa13.49□□□□□ -0.25
HMG20B-212ENST00000487894 OR13F1Q8NGS4 319 aa13.49□□□□□ -0.25
HMG20B-212ENST00000487894 S1PR3Q99500 378 aa13.49□□□□□ -0.25
HMG20B-212ENST00000487894 CITED2Q99967 270 aaPredicted RBP13.49□□□□□ -0.25
HMG20B-212ENST00000487894 FUNDC2Q9BWH2 189 aa13.49□□□□□ -0.25
HMG20B-212ENST00000487894 LIN7CQ9NUP9 197 aaKnown RBP13.49□□□□□ -0.25
HMG20B-212ENST00000487894 RDH8Q9NYR8 311 aa13.49□□□□□ -0.25
HMG20B-212ENST00000487894 TRBV6-7A0A0A0MS04 114 aa13.48□□□□□ -0.25
HMG20B-212ENST00000487894 TMEM235A6NFC5 223 aa13.48□□□□□ -0.25
HMG20B-212ENST00000487894 BET1O15155 118 aa13.48□□□□□ -0.25
HMG20B-212ENST00000487894 DIRAS3O95661 229 aa13.48□□□□□ -0.25
HMG20B-212ENST00000487894 DTYMKP23919 212 aa13.48□□□□□ -0.25
HMG20B-212ENST00000487894 TALDO1P37837 337 aa13.48□□□□□ -0.25
HMG20B-212ENST00000487894 RPS19P39019 145 aaKnown RBP13.48□□□□□ -0.25
HMG20B-212ENST00000487894 SERPINB10P48595 397 aa13.48□□□□□ -0.25
HMG20B-212ENST00000487894 F2RL1P55085 397 aa13.48□□□□□ -0.25
HMG20B-212ENST00000487894 TCTEX1D4Q5JR98 221 aa13.48□□□□□ -0.25
HMG20B-212ENST00000487894 CENPVQ7Z7K6 275 aaPredicted RBP13.48□□□□□ -0.25
HMG20B-212ENST00000487894 NUDCD2Q8WVJ2 157 aa13.48□□□□□ -0.25
HMG20B-212ENST00000487894 ABCG5Q9H222 651 aa13.48□□□□□ -0.25
HMG20B-212ENST00000487894 GHITMQ9H3K2 345 aa13.48□□□□□ -0.25
HMG20B-212ENST00000487894 SPATA2Q9UM82 520 aa13.48□□□□□ -0.25
HMG20B-212ENST00000487894 PLXNB1O43157 2135 aa13.48□□□□□ -0.25
HMG20B-212ENST00000487894 TMEM127O75204 238 aa13.47□□□□□ -0.25
HMG20B-212ENST00000487894 PROP1O75360 226 aa13.47□□□□□ -0.25
HMG20B-212ENST00000487894 CT45A6P0DMU7 189 aa13.47□□□□□ -0.25
HMG20B-212ENST00000487894 CT45A5P0DMU8 189 aa13.47□□□□□ -0.25
HMG20B-212ENST00000487894 CT45A7P0DMV0 189 aa13.47□□□□□ -0.25
HMG20B-212ENST00000487894 CD83Q01151 205 aa13.47□□□□□ -0.25
HMG20B-212ENST00000487894 NSUN5P1Q3KNT7 163 aa13.47□□□□□ -0.25
HMG20B-212ENST00000487894 FAM131AQ6UXB0 335 aa13.47□□□□□ -0.25
HMG20B-212ENST00000487894 SLC35E3Q7Z769 313 aa13.47□□□□□ -0.25
HMG20B-212ENST00000487894 NDUFA11Q86Y39 141 aa13.47□□□□□ -0.25
HMG20B-212ENST00000487894 FAM110DQ8TAY7 271 aaPredicted RBP13.47□□□□□ -0.25
HMG20B-212ENST00000487894 RITA1Q96K30 269 aa13.47□□□□□ -0.25
HMG20B-212ENST00000487894 NOL4LQ96MY1 436 aaPredicted RBP13.47□□□□□ -0.25
HMG20B-212ENST00000487894 NOTCH1P46531 2555 aa13.46□□□□□ -0.25
HMG20B-212ENST00000487894 LINC01548A6NM66 108 aa13.46□□□□□ -0.25
HMG20B-212ENST00000487894 SSX5O60225 188 aa13.46□□□□□ -0.25
HMG20B-212ENST00000487894 CNTFRP26992 372 aa13.46□□□□□ -0.25
HMG20B-212ENST00000487894 GPR12P47775 334 aa13.46□□□□□ -0.25
HMG20B-212ENST00000487894 ACTBP60709 375 aa13.46□□□□□ -0.25
HMG20B-212ENST00000487894 NCS1P62166 190 aa13.46□□□□□ -0.25
HMG20B-212ENST00000487894 TAGLNQ01995 201 aaKnown RBP13.46□□□□□ -0.25
HMG20B-212ENST00000487894 MMDQ15546 238 aa13.46□□□□□ -0.25
HMG20B-212ENST00000487894 PNLIPRP3Q17RR3 467 aa13.46□□□□□ -0.25
HMG20B-212ENST00000487894 GLDNQ6ZMI3 551 aaPredicted RBP13.46□□□□□ -0.25
HMG20B-212ENST00000487894 CROCCP3Q8IVE0 287 aa13.46□□□□□ -0.25
HMG20B-212ENST00000487894 OR10J5Q8NHC4 309 aa13.46□□□□□ -0.25
HMG20B-212ENST00000487894 RASL11BQ9BPW5 248 aa13.46□□□□□ -0.25
HMG20B-212ENST00000487894 HSPB9Q9BQS6 159 aa13.46□□□□□ -0.25
HMG20B-212ENST00000487894 LINC00527Q9UJ94 153 aa13.46□□□□□ -0.25
HMG20B-212ENST00000487894 RNF150Q9ULK6 438 aa13.46□□□□□ -0.25
HMG20B-212ENST00000487894 A0A0A6YYH2 397 aa13.45□□□□□ -0.26
HMG20B-212ENST00000487894 PSMB11A5LHX3 300 aa13.45□□□□□ -0.26
HMG20B-212ENST00000487894 OR5H14A6NHG9 310 aa13.45□□□□□ -0.26
HMG20B-212ENST00000487894 A6NJ64 397 aa13.45□□□□□ -0.26
HMG20B-212ENST00000487894 H0YJW9 148 aa13.45□□□□□ -0.26
HMG20B-212ENST00000487894 GNG2P59768 71 aa13.45□□□□□ -0.26
HMG20B-212ENST00000487894 PITPNAQ00169 270 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms