RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 UTF1Q5T230 341 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 OR52M1Q8NGK5 317 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 RBPMSQ93062 196 aaKnown RBP7.79□□□□□ -1.16
SF3B1-211ENST00000487698 RNF126Q9BV68 326 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 IFI27L2Q9H2X8 130 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 LPAR3Q9UBY5 353 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 PSG11Q9UQ72 335 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 LAMP3Q9UQV4 416 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 KLF2Q9Y5W3 355 aaPredicted RBP7.79□□□□□ -1.16
SF3B1-211ENST00000487698 COL12A1Q99715 3063 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 MALRD1Q5VYJ5 2156 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 CLEC18AA5D8T8 446 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 RNF222A6NCQ9 220 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 RNF212BA8MTL3 300 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 L7N2F9 121 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 LY6HO94772 140 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 ZNF134P52741 427 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 RAB32Q13637 225 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 ZNF345Q14585 488 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 ZNF585BQ52M93 769 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 TMEM200BQ69YZ2 307 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 PRSS54Q6PEW0 395 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 ZNF546Q86UE3 836 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 ZNF695Q8IW36 515 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 CLEC18CQ8NCF0 446 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 ZNF439Q8NDP4 499 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 OR10A7Q8NGE5 316 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 THAP6Q8TBB0 222 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 ABHD14BQ96IU4 210 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 UBTD1Q9HAC8 227 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 SDHAF2Q9NX18 166 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 IDI2-AS1Q9NZ38 188 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 AKAP6Q13023 2319 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 PROP1O75360 226 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 MMP23AO75900 390 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 IGKV1-39P01597 117 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 IGKV1D-39P04432 117 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 DAOP14920 347 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 VDAC1P21796 283 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 S100A11P31949 105 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 RPL30P62888 115 aaKnown RBP7.78□□□□□ -1.16
SF3B1-211ENST00000487698 ESCO2Q56NI9 601 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 ZNF841Q6ZN19 808 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 FAM219AQ8IW50 185 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 MFFQ9GZY8 342 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 GAL3ST2Q9H3Q3 398 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 GSKIPQ9P0R6 139 aa7.78□□□□□ -1.16
SF3B1-211ENST00000487698 RPUSD1Q9UJJ7 312 aaKnown RBP7.78□□□□□ -1.16
SF3B1-211ENST00000487698 PIGBOS1A0A0B4J2F0 54 aa7.77□□□□□ -1.17
SF3B1-211ENST00000487698 SLC31A2O15432 143 aa7.77□□□□□ -1.17
SF3B1-211ENST00000487698 SERPINE2P07093 398 aa7.77□□□□□ -1.17
SF3B1-211ENST00000487698 PET100P0DJ07 73 aa7.77□□□□□ -1.17
SF3B1-211ENST00000487698 DLX6P56179 175 aa7.77□□□□□ -1.17
SF3B1-211ENST00000487698 BRWD1-AS2P59051 145 aa7.77□□□□□ -1.17
SF3B1-211ENST00000487698 OPCMLQ14982 345 aa7.77□□□□□ -1.17
SF3B1-211ENST00000487698 Q3ZCU0 254 aa7.77□□□□□ -1.17
SF3B1-211ENST00000487698 PRAMEF5Q5TYX0 476 aa7.77□□□□□ -1.17
SF3B1-211ENST00000487698 HEPN1Q6WQI6 88 aa7.77□□□□□ -1.17
SF3B1-211ENST00000487698 TMUB2Q71RG4 321 aa7.77□□□□□ -1.17
SF3B1-211ENST00000487698 OR4D5Q8NGN0 318 aa7.77□□□□□ -1.17
SF3B1-211ENST00000487698 ZNF714Q96N38 554 aa7.77□□□□□ -1.17
SF3B1-211ENST00000487698 HSD17B10Q99714 261 aaKnown RBP7.77□□□□□ -1.17
SF3B1-211ENST00000487698 ABHD14AQ9BUJ0 271 aa7.77□□□□□ -1.17
SF3B1-211ENST00000487698 PLEKHF2Q9H8W4 249 aa7.77□□□□□ -1.17
SF3B1-211ENST00000487698 FAM212BQ9NTI7 297 aaPredicted RBP7.77□□□□□ -1.17
SF3B1-211ENST00000487698 OR5AC2Q9NZP5 309 aa7.77□□□□□ -1.17
SF3B1-211ENST00000487698 CHD6Q8TD26 2715 aa7.77□□□□□ -1.17
SF3B1-211ENST00000487698 TRBV23-1A0A0A0MS06 115 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 OR2F2O95006 317 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 MBPP02686 304 aaPredicted RBP7.76□□□□□ -1.17
SF3B1-211ENST00000487698 CCL3L1P16619 93 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 C4BPBP20851 252 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 CDKN1AP38936 164 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 GPR12P47775 334 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 RAB7AP51149 207 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 SRSF1Q07955 248 aaKnown RBP eCLIP7.76□□□□□ -1.17
SF3B1-211ENST00000487698 CATR1Q13166 79 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 OR2F1Q13607 317 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 TMEM155Q4W5P6 130 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 CT45A1Q5HYN5 189 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 AVPI1Q5T686 147 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 BTNL3Q6UXE8 466 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 ZNF66Q6ZN08 573 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 ACOT7LQ6ZUV0 252 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 KCNRGQ8N5I3 272 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 TCTEX1D1Q8N7M0 179 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 OR1S1Q8NH92 325 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 CT45A3Q8NHU0 189 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 IGFBPL1Q8WX77 278 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 H1FXQ92522 213 aaKnown RBP7.76□□□□□ -1.17
SF3B1-211ENST00000487698 LEAP2Q969E1 77 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 RRNAD1Q96FB5 475 aaKnown RBP7.76□□□□□ -1.17
SF3B1-211ENST00000487698 SPIN2AQ99865 258 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 SPIN2BQ9BPZ2 258 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 SPOCK3Q9BQ16 436 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 CHODLQ9H9P2 273 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 PAIP2BQ9ULR5 123 aaKnown RBP7.76□□□□□ -1.17
SF3B1-211ENST00000487698 GAB2Q9UQC2 676 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 FAM208BQ5VWN6 2430 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 A0A0D9SG52 128 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms