RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 DHRS9Q9BPW9 319 aa2.38□□□□□ -2.03
UBR3-211ENST00000487689 GABARAPL3Q9BY60 117 aa2.38□□□□□ -2.03
UBR3-211ENST00000487689 METTL9Q9H1A3 318 aa2.38□□□□□ -2.03
UBR3-211ENST00000487689 OR51B6Q9H340 312 aa2.38□□□□□ -2.03
UBR3-211ENST00000487689 PLEKHF2Q9H8W4 249 aa2.38□□□□□ -2.03
UBR3-211ENST00000487689 MYOZ1Q9NP98 299 aaPredicted RBP2.38□□□□□ -2.03
UBR3-211ENST00000487689 C12orf4Q9NQ89 552 aa2.38□□□□□ -2.03
UBR3-211ENST00000487689 DIABLOQ9NR28 239 aa2.38□□□□□ -2.03
UBR3-211ENST00000487689 DDIT4Q9NX09 232 aa2.38□□□□□ -2.03
UBR3-211ENST00000487689 FAM206AQ9NX38 181 aa2.38□□□□□ -2.03
UBR3-211ENST00000487689 STARD9Q9P2P6 4700 aa2.38□□□□□ -2.03
UBR3-211ENST00000487689 TP53TG1Q9Y2A0 90 aa2.38□□□□□ -2.03
UBR3-211ENST00000487689 MYH7P12883 1935 aa2.38□□□□□ -2.03
UBR3-211ENST00000487689 ZNF638Q14966 1978 aaKnown RBP2.38□□□□□ -2.03
UBR3-211ENST00000487689 PIKFYVEQ9Y2I7 2098 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 IGLV8-61A0A075B6I0 122 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 TINCRA0A1B0GVN0 87 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 DAPL1A0PJW8 107 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 ARGFXA6NJG6 315 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 CEACAM18A8MTB9 384 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 F5H5T6 163 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 H7C417 338 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 CXCR6O00574 342 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 TAAR5O14804 337 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 AZIN1O14977 448 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 CD5LO43866 347 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 ENTPD6O75354 484 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 FOXH1O75593 365 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 CTDNEP1O95476 244 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 TCRBP04435 133 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 HSPB1P04792 205 aaKnown RBP2.37□□□□□ -2.03
UBR3-211ENST00000487689 TYMSP04818 313 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 IFNA16P05015 189 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 IL6P05231 212 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 OR4E1P0C645 316 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 CCDC166P0CW27 439 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 IGHV3-43DP0DP04 118 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 ICAM2P13598 275 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 ATF1P18846 271 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 RAB3AP20336 220 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 FUT3P21217 361 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 COX7A1P24310 79 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 PSMA1P25786 263 aaKnown RBP2.37□□□□□ -2.03
UBR3-211ENST00000487689 P2RX1P51575 399 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 FGF8P55075 233 aaPredicted RBP2.37□□□□□ -2.03
UBR3-211ENST00000487689 CLDN12P56749 244 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 OR4D2P58180 307 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 RPS23P62266 143 aaKnown RBP2.37□□□□□ -2.03
UBR3-211ENST00000487689 LSM6P62312 80 aaKnown RBP2.37□□□□□ -2.03
UBR3-211ENST00000487689 FAM3AP98173 230 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 BAXQ07812 192 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 AESQ08117 197 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 EGFEM1PQ0D2K5 195 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 ZNF266Q14584 549 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 ZSCAN26Q16670 478 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 TTC32Q5I0X7 151 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 TMEM215Q68D42 235 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 LAMTOR1Q6IAA8 161 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 LCN12Q6JVE5 192 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 CASP12Q6UXS9 341 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 RTL4Q6ZR62 310 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 FAM92BQ6ZTR7 304 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 CCDC121Q6ZUS5 278 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 FAM220AQ7Z4H9 259 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 FAM19A5Q7Z5A7 132 aaPredicted RBP2.37□□□□□ -2.03
UBR3-211ENST00000487689 HSD17B13Q7Z5P4 300 aaPredicted RBP2.37□□□□□ -2.03
UBR3-211ENST00000487689 NT5DC3Q86UY8 548 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 ZFP82Q8N141 532 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 STK40Q8N2I9 435 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 RIBC1Q8N443 379 aaPredicted RBP2.37□□□□□ -2.03
UBR3-211ENST00000487689 C3orf56Q8N813 242 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 ZFP41Q8N8Y5 198 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 OR1S1Q8NH92 325 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 C16orf78Q8WTQ4 265 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 LRRC29Q8WV35 223 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 UCN3Q969E3 161 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 CREB3L1Q96BA8 519 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 TLCD1Q96CP7 247 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 DNAJC19Q96DA6 116 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 SMARCD1Q96GM5 515 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 PPP1R36Q96LQ0 422 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 BIRC8Q96P09 236 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 TMEM208Q9BTX3 173 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 EMC6Q9BV81 110 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 TMED9Q9BVK6 235 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 CDCA4Q9BXL8 241 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 BCL2L14Q9BZR8 327 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 SLIRPQ9GZT3 109 aaKnown RBP2.37□□□□□ -2.03
UBR3-211ENST00000487689 SLC22A4Q9H015 551 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 PTGES2Q9H7Z7 377 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 TMEM27Q9HBJ8 222 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 FAM49BQ9NUQ9 324 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 PAQR5Q9NXK6 330 aaPredicted RBP2.37□□□□□ -2.03
UBR3-211ENST00000487689 FBXL12Q9NXK8 326 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 MTFP1Q9UDX5 166 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 CD84Q9UIB8 345 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 VAX2Q9UIW0 290 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.37□□□□□ -2.03
UBR3-211ENST00000487689 PLCE1Q9P212 2302 aa2.37□□□□□ -2.03
UBR3-211ENST00000487689 FREM1Q5H8C1 2179 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms