RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 C9orf62Q8N4C0 152 aa5.09□□□□□ -1.59
VAMP3-203ENST00000487194 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.09□□□□□ -1.59
VAMP3-203ENST00000487194 OR8B3Q8NGG8 313 aa5.09□□□□□ -1.59
VAMP3-203ENST00000487194 THAP6Q8TBB0 222 aa5.09□□□□□ -1.59
VAMP3-203ENST00000487194 PPP1R1CQ8WVI7 109 aa5.09□□□□□ -1.59
VAMP3-203ENST00000487194 H1FXQ92522 213 aaKnown RBP5.09□□□□□ -1.59
VAMP3-203ENST00000487194 RBPMSQ93062 196 aaKnown RBP5.09□□□□□ -1.59
VAMP3-203ENST00000487194 NEIL1Q96FI4 390 aaPredicted RBP5.09□□□□□ -1.59
VAMP3-203ENST00000487194 SEC22AQ96IW7 307 aa5.09□□□□□ -1.59
VAMP3-203ENST00000487194 OR8B2Q96RD0 313 aa5.09□□□□□ -1.59
VAMP3-203ENST00000487194 TP53RKQ96S44 253 aa5.09□□□□□ -1.59
VAMP3-203ENST00000487194 HSD17B10Q99714 261 aaKnown RBP5.09□□□□□ -1.59
VAMP3-203ENST00000487194 AGMATQ9BSE5 352 aa5.09□□□□□ -1.59
VAMP3-203ENST00000487194 GON7Q9BXV9 100 aa5.09□□□□□ -1.59
VAMP3-203ENST00000487194 PARP12Q9H0J9 701 aaKnown RBP5.09□□□□□ -1.59
VAMP3-203ENST00000487194 OR2D2Q9H210 308 aa5.09□□□□□ -1.59
VAMP3-203ENST00000487194 C19orf12Q9NSK7 152 aa5.09□□□□□ -1.59
VAMP3-203ENST00000487194 PSG11Q9UQ72 335 aa5.09□□□□□ -1.59
VAMP3-203ENST00000487194 HSPB11Q9Y547 144 aa5.09□□□□□ -1.59
VAMP3-203ENST00000487194 RAI1Q7Z5J4 1906 aaPredicted RBP5.09□□□□□ -1.6
VAMP3-203ENST00000487194 FLNCQ14315 2725 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 FXYD6-FXYD2A0A087WZ82 144 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 hCG_1809904A0A1W2PP81 198 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 A0A1W2PPE2 198 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 A0A1W2PR64 198 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 A0A1W2PRV1 198 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 L7N2F9 121 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 OVOL3O00110 214 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 RAB29O14966 203 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 ST8SIA5O15466 376 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 TNFSF12O43508 249 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 MPC2O95563 127 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 RBP4P02753 201 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 RLN2P04090 185 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 SLC25A6P12236 298 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 COX6B1P14854 86 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 VDAC1P21796 283 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 OMGP23515 440 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 NFYBP25208 207 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 NUP62P37198 522 aaPredicted RBP5.08□□□□□ -1.6
VAMP3-203ENST00000487194 CDKN1AP38936 164 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 KIR2DS2P43631 304 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 GPR6P46095 362 aaPredicted RBP5.08□□□□□ -1.6
VAMP3-203ENST00000487194 RIPPLY3P57055 190 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 SMCO1Q147U7 214 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 Q5BKY6 102 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 THOC7Q6I9Y2 204 aaKnown RBP5.08□□□□□ -1.6
VAMP3-203ENST00000487194 C11orf87Q6NUJ2 197 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 TCF23Q7RTU1 214 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 LYZL2Q7Z4W2 148 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 SLC35G3Q8N808 338 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 C8orf31Q8N9H6 132 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 ZBTB8BQ8NAP8 495 aaPredicted RBP5.08□□□□□ -1.6
VAMP3-203ENST00000487194 OR11H4Q8NGC9 324 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 OR51H1Q8NH63 302 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 CD300LFQ8TDQ1 290 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 LSM10Q969L4 123 aaKnown RBP5.08□□□□□ -1.6
VAMP3-203ENST00000487194 WDR89Q96FK6 387 aaPredicted RBP5.08□□□□□ -1.6
VAMP3-203ENST00000487194 ADTRPQ96IZ2 230 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 OR10C1Q96KK4 312 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 ABHD14AQ9BUJ0 271 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 SLA2Q9H6Q3 261 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 SDHAF2Q9NX18 166 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 PRR13Q9NZ81 148 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 GSKIPQ9P0R6 139 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 CTSZQ9UBR2 303 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 RPUSD1Q9UJJ7 312 aaKnown RBP5.08□□□□□ -1.6
VAMP3-203ENST00000487194 RNF150Q9ULK6 438 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 UBR5O95071 2799 aaPredicted RBP5.08□□□□□ -1.6
VAMP3-203ENST00000487194 DSCAML1Q8TD84 2053 aa5.08□□□□□ -1.6
VAMP3-203ENST00000487194 TRAV14DV4A0A0A6YYC5 116 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 A0A0D9SG52 128 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 MEX3AA1L020 520 aaKnown RBP5.07□□□□□ -1.6
VAMP3-203ENST00000487194 CLEC18AA5D8T8 446 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 MPTX1A8MV57 137 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 ARPC5O15511 151 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 CLDN1O95832 211 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 RNF224P0DH78 156 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 ZNF16P17020 682 aaPredicted RBP5.07□□□□□ -1.6
VAMP3-203ENST00000487194 THBS3P49746 956 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 PDLIM4P50479 330 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 IL15RAQ13261 267 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 EIF4EBP1Q13541 118 aaPredicted RBP5.07□□□□□ -1.6
VAMP3-203ENST00000487194 ZNF345Q14585 488 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 ZNF273Q14593 569 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 LGALSLQ3ZCW2 172 aaPredicted RBP5.07□□□□□ -1.6
VAMP3-203ENST00000487194 LRRC37A5PQ49AS3 106 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 CT45A1Q5HYN5 189 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 AVPI1Q5T686 147 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 PRAMEF5Q5TYX0 476 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 WDR25Q64LD2 544 aaPredicted RBP5.07□□□□□ -1.6
VAMP3-203ENST00000487194 LAMTOR1Q6IAA8 161 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 PRSS54Q6PEW0 395 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 ZNF841Q6ZN19 808 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 SLC25A48Q6ZT89 311 aaKnown RBP5.07□□□□□ -1.6
VAMP3-203ENST00000487194 ZNF546Q86UE3 836 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 FAM219AQ8IW50 185 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 SPAG16Q8N0X2 631 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 FGFRL1Q8N441 504 aa5.07□□□□□ -1.6
VAMP3-203ENST00000487194 INO80EQ8NBZ0 244 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms