RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 PPIL1Q9Y3C6 166 aa2.82□□□□□ -1.96
PRPF38A-203ENST00000487160 TLN2Q9Y4G6 2542 aa2.82□□□□□ -1.96
PRPF38A-203ENST00000487160 HEATR5AQ86XA9 2040 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 IGLV2-18A0A075B6J9 118 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 IGLV3-12A0A075B6K2 115 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 TRAV8-7A0A075B6U6 113 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 IGHV2OR16-5A0A0B4J2B6 119 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 RNASEK-C17orf49H0YIS7 233 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 RPL36A-HNRNPH2H7BZ11 118 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 RBBP9O75884 186 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 OR2B3O76000 313 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 UQCRHP07919 91 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 DEKP35659 375 aaKnown RBP2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 HSPA9P38646 679 aaKnown RBP2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 GALR1P47211 349 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 SPINT3P49223 89 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 ZNF616Q08AN1 781 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 IFFO1Q0D2I5 559 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 DEFB113Q30KQ7 82 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 NEGR1Q7Z3B1 354 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 HMGN2P46Q86SG4 172 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 SPATA24Q86W54 205 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 DOLPP1Q86YN1 238 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 TRAPPC5Q8IUR0 188 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 SLC7A5P1Q8MH63 180 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 C17orf78Q8N4C9 275 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 ZNF561Q8N587 486 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 OR4M2Q8NGB6 313 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 OR11G2Q8NGC1 345 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 OR1S1Q8NH92 325 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 CLHC1Q8NHS4 586 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 RTN4IP1Q8WWV3 396 aaPredicted RBP2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 PSMF1Q92530 271 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 ALS2CR12Q96Q35 445 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 C20orf144Q9BQM9 153 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 PLEKHA1Q9HB21 404 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 C15orf41Q9Y2V0 281 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 S4R3C0 116 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 NCKAP5O14513 1909 aa2.81□□□□□ -1.96
PRPF38A-203ENST00000487160 TGP01266 2768 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 MPDZO75970 2070 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 TRAV8-4A0A0B4J246 113 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 H7C2Y5 167 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 SCN2BO60939 215 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 CDK14O94921 469 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 P01737 135 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 HTR2BP41595 481 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 GABRA4P48169 554 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 TAS2R60P59551 318 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 IHHQ14623 411 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 KRTAP13-3Q3SY46 172 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 FAM222AQ5U5X8 452 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 THOC7Q6I9Y2 204 aaKnown RBP2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 ERICH5Q6P6B1 374 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 WDR59Q6PJI9 974 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 C16orf47Q6ZP98 133 aaPredicted RBP2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 ZNF101Q8IZC7 436 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 RPRMLQ8N4K4 120 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 RNF182Q8N6D2 247 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 OR4E2Q8NGC2 313 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 DEDD2Q8WXF8 326 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 S100PBPQ96BU1 408 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 TSNAXQ99598 290 aaKnown RBP2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 ZNF2Q9BSG1 426 aaPredicted RBP2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 MARVELD1Q9BSK0 173 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 DHX35Q9H5Z1 703 aaKnown RBP2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 PLEKHF2Q9H8W4 249 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 WDR54Q9H977 334 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 FAM60AQ9NP50 221 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 DNAJC12Q9UKB3 198 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 SONP18583 2426 aaKnown RBP2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 HIVEP2P31629 2446 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 DNAJC13O75165 2243 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 ZNF407Q9C0G0 2248 aa2.8□□□□□ -1.96
PRPF38A-203ENST00000487160 ANK2Q01484 3957 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 SVEP1Q4LDE5 3571 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 IGHV1-3A0A0C4DH29 117 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 A0A1B0GX78 115 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 J3QT63 122 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 PIRTP0C851 137 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 COX6A1P12074 109 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 IL3RAP26951 378 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 PMS2P3Q13401 168 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 SYCP1Q15431 976 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 PRSS8Q16651 343 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 EXOC3L4Q17RC7 722 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 LUZP6Q538Z0 58 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 FAM27D1Q5T7N8 215 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 ZCCHC24Q8N2G6 241 aaKnown RBP2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 ATPAF2Q8N5M1 289 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 SPANXA2-OT1Q8N9U9 137 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 NAT14Q8WUY8 206 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 TMEM239Q8WW34 195 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 LCN9Q8WX39 176 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 NELFBQ8WX92 580 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 SNF8Q96H20 258 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 MCEEQ96PE7 176 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 TRNT1Q96Q11 434 aaKnown RBP2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 LYSMD1Q96S90 227 aa2.79□□□□□ -1.96
PRPF38A-203ENST00000487160 PEBP4Q96S96 227 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms