RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 TMEM255BQ8WV15 326 aa4.54□□□□□ -1.68
SF1-217ENST00000486960 TMEM158Q8WZ71 300 aa4.54□□□□□ -1.68
SF1-217ENST00000486960 ARPC1AQ92747 370 aa4.54□□□□□ -1.68
SF1-217ENST00000486960 PIK3IP1Q96FE7 263 aa4.54□□□□□ -1.68
SF1-217ENST00000486960 C20orf144Q9BQM9 153 aa4.54□□□□□ -1.68
SF1-217ENST00000486960 TEX101Q9BY14 249 aa4.54□□□□□ -1.68
SF1-217ENST00000486960 Q9HAA7 133 aa4.54□□□□□ -1.68
SF1-217ENST00000486960 SPHK2Q9NRA0 654 aa4.54□□□□□ -1.68
SF1-217ENST00000486960 ZNF780BQ9Y6R6 833 aa4.54□□□□□ -1.68
SF1-217ENST00000486960 YLPM1P49750 1951 aaKnown RBP4.54□□□□□ -1.68
SF1-217ENST00000486960 HCFC1P51610 2035 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 USF3Q68DE3 2245 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 CHD5Q8TDI0 1954 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 A0A087WZ39 114 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 A0A0X1KG70 313 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 A0A1B0GV50 99 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 SMIM31A0A1B0GVY4 71 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 TMEM189A5PLL7 270 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 GMNCA6NCL1 334 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 RAMP2O60895 175 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 HLA-DQB2P05538 268 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 IL3P08700 152 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 ATF1P18846 271 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 USF1P22415 310 aaPredicted RBP4.53□□□□□ -1.68
SF1-217ENST00000486960 EVX1P49640 407 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 FABP6P51161 128 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 UBE2E1P51965 193 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 HNRNPA3P51991 378 aaKnown RBP4.53□□□□□ -1.68
SF1-217ENST00000486960 ERVFC1-1P60608 527 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 CNPY1Q3B7I2 92 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 OCIAD2Q56VL3 154 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 C1orf194Q5T5A4 169 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 AWAT2Q6E213 333 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 NANOGP8Q6NSW7 305 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 SLC18B1Q6NT16 456 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 GUSBP11Q6P575 273 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 NAPRTQ6XQN6 538 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 Q6ZVQ6 151 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 KRTAP1-3Q8IUG1 177 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 PDZD9Q8IXQ8 264 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 PRR22Q8IZ63 422 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 OSR2Q8N2R0 312 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 PNKDQ8N490 385 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 CBR4Q8N4T8 237 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 ACBD7Q8N6N7 88 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 OR2T33Q8NG76 320 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 OR4E2Q8NGC2 313 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 OR51A2Q8NGJ7 313 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 OR10G7Q8NGN6 311 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 OR1J1Q8NGS3 322 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 ZFAND1Q8TCF1 268 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 APOBEC4Q8WW27 367 aaKnown RBP4.53□□□□□ -1.68
SF1-217ENST00000486960 ACOT12Q8WYK0 555 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 DNAJA3Q96EY1 480 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 CMTM7Q96FZ5 175 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 UBE2E2Q96LR5 201 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 ZNF778Q96MU6 729 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 OR52E6Q96RD3 313 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 KLF6Q99612 283 aaPredicted RBP4.53□□□□□ -1.68
SF1-217ENST00000486960 FAM173AQ9BQD7 235 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 FAAP24Q9BTP7 215 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 SLC29A3Q9BZD2 475 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 LIME1Q9H400 295 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 NANOGQ9H9S0 305 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 PLAC1Q9HBJ0 212 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 ASF1BQ9NVP2 202 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 DHCR7Q9UBM7 475 aaKnown RBP4.53□□□□□ -1.68
SF1-217ENST00000486960 NTNG1Q9Y2I2 539 aa4.53□□□□□ -1.68
SF1-217ENST00000486960 MEIKINA0A087WXM9 373 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 A6NDN8 102 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 C11orf98E9PRG8 122 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 M0R143 59 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 ICOSLGO75144 302 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 GCM2O75603 506 aaPredicted RBP4.52□□□□□ -1.69
SF1-217ENST00000486960 IGHV4-31P0DP07 118 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 GNB3P16520 340 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 NR4A2P43354 598 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 CD226Q15762 336 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 ZNF239Q16600 458 aaKnown RBP4.52□□□□□ -1.69
SF1-217ENST00000486960 ATP6AP1LQ52LC2 224 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 TECRLQ5HYJ1 363 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 PIK3CD-AS1Q5SR53 167 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 PVRIGQ6DKI7 326 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 ZNF549Q6P9A3 640 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 CBLN2Q8IUK8 224 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 BAP18Q8IXM2 172 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 KLHDC8BQ8IXV7 354 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 CIARTQ8N365 385 aaPredicted RBP4.52□□□□□ -1.69
SF1-217ENST00000486960 ZNF557Q8N988 423 aaPredicted RBP4.52□□□□□ -1.69
SF1-217ENST00000486960 OR9I1Q8NGQ6 314 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 C11orf45Q8TAV5 145 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 ARL11Q969Q4 196 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 ROPN1LQ96C74 230 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 CMBLQ96DG6 245 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 REEP6Q96HR9 211 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 SMIM14Q96QK8 99 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 SPATA25Q9BR10 227 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 ULBP3Q9BZM4 244 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 PELI2Q9HAT8 420 aa4.52□□□□□ -1.69
SF1-217ENST00000486960 LYRM2Q9NU23 88 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms