RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 FAM103A1Q9BTL3 118 aaKnown RBP9.03□□□□□ -0.96
CCDC171-208ENST00000486641 SAMD10Q9BYL1 202 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 METTL7AQ9H8H3 244 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 ERRFI1Q9UJM3 462 aaPredicted RBP9.03□□□□□ -0.96
CCDC171-208ENST00000486641 LAMTOR2Q9Y2Q5 125 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 ATP23Q9Y6H3 246 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 GON4LQ3T8J9 2241 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 SH2D1BO14796 132 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 KRASP01116 189 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 S100GP29377 79 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 KRTDAPP60985 99 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 UBE2V1Q13404 147 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 FAM27BQ5VT28 67 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 ZNF324BQ6AW86 544 aaPredicted RBP9.03□□□□□ -0.96
CCDC171-208ENST00000486641 C20orf204Q6ZNR8 217 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 BAGE3Q86Y29 109 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 BAGE2Q86Y30 109 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 NFAM1Q8NET5 270 aaPredicted RBP9.03□□□□□ -0.96
CCDC171-208ENST00000486641 STRADBQ9C0K7 418 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 MRPL18Q9H0U6 180 aaKnown RBP9.03□□□□□ -0.96
CCDC171-208ENST00000486641 IL23AQ9NPF7 189 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 IL36RNQ9UBH0 155 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 OR2W1Q9Y3N9 320 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 TRAV39A0A0B4J263 110 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 ZNF816-ZNF321PA0A0X1KG74 233 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 KIR2DS1A0A191URI9 304 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 DIRC3C9JPN6 131 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 CBR3O75828 277 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 CTXN2P0C2S0 81 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 KIR2DS4P43632 304 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 ATP5G3P48201 142 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 UBE2G2P60604 165 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 SUMO1P63165 101 aaKnown RBP9.02□□□□□ -0.97
CCDC171-208ENST00000486641 KIR2DS1Q14954 304 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 TMEM14EPQ6UXP3 125 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 OR1F12Q8NHA8 337 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 PSMF1Q92530 271 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 OR6C1Q96RD1 312 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 UCN2Q96RP3 112 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 CHRNA10Q9GZZ6 450 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 GPR27Q9NS67 375 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 LOC105371242A0A075B767 164 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 IGLV3-32A0A0A0MS00 114 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 hCG_38984A0A1B0GV85 526 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 LILRA5A6NI73 299 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 HYPMO75409 117 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 SYNGR4O95473 234 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 TFF3Q07654 80 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 TRIM61Q5EBN2 209 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 Q6ZN92 141 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 C1orf174Q8IYL3 243 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 RNF2Q99496 336 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 ALKBH7Q9BT30 221 aaPredicted RBP9.02□□□□□ -0.97
CCDC171-208ENST00000486641 ULBP2Q9BZM5 246 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 ZNF552Q9H707 407 aaPredicted RBP9.02□□□□□ -0.97
CCDC171-208ENST00000486641 ZNF703Q9H7S9 590 aaPredicted RBP9.02□□□□□ -0.97
CCDC171-208ENST00000486641 UQCR10Q9UDW1 63 aa9.02□□□□□ -0.97
CCDC171-208ENST00000486641 MDFIC2A0A1B0GVS7 189 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 NPIPA2E9PIF3 369 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 NPIPA3F8WFD2 350 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 CLDN1O95832 211 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 IGLV2-14P01704 120 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 GPX1P07203 203 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 FRMD6-AS1P0C7T7 363 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 IGLC2P0DOY2 106 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 IGLC3P0DOY3 106 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 ZNF16P17020 682 aaPredicted RBP9.01□□□□□ -0.97
CCDC171-208ENST00000486641 COX5AP20674 150 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 HNF1AP20823 631 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 KITLGP21583 273 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 ARL4DP49703 201 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 BLKP51451 505 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 CLDN15P56746 228 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 BPIFB3P59826 476 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 ZNF585BQ52M93 769 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 RABEPKQ7Z6M1 372 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 SIGLECL1Q8N7X8 197 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 Q8NFD4 153 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 OR1L1Q8NH94 360 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 SGCZQ96LD1 299 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 TXN2Q99757 166 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 TUBG2Q9NRH3 451 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 PPP1R3CQ9UQK1 317 aa9.01□□□□□ -0.97
CCDC171-208ENST00000486641 TRBV20OR9-2A0A075B6H5 130 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 FAM90A10PA6NDY2 464 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 FAM90A18PA6NE21 464 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 FAM90A16PA6NEW6 464 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 FAM90A20PA6NIJ5 464 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 FAM90A8PA6NJQ4 464 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 FAM90A7PA6NKC0 464 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 FAM90A22PA8MWA6 464 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 FAM90A12PA8MX19 464 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 FAM90A5PA8MXJ8 464 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 FAM90A23PA8MXZ1 464 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 F6UZH7 168 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 PDE6DO43924 150 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 TOMM40O96008 361 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 FAM90A15PP0C7V4 464 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 FAM90A13PP0C7W8 464 aa9□□□□□ -0.97
CCDC171-208ENST00000486641 FAM90A14PP0C7W9 464 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms