RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 IFT22Q9H7X7 185 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 CISD1Q9NZ45 108 aaKnown RBP7.63□□□□□ -1.19
COL12A1-208ENST00000486533 PRR13Q9NZ81 148 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 CACFD1Q9UGQ2 172 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 RNF150Q9ULK6 438 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 TMEM56-RWDD3S4R434 201 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 ALPK2Q86TB3 2170 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 ZNF587BE7ETH6 402 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 TRAPPC2LH3BP13 241 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 GEMIN2O14893 280 aaKnown RBP7.62□□□□□ -1.19
COL12A1-208ENST00000486533 TGOLN2O43493 480 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 OR7C1O76099 320 aaPredicted RBP7.62□□□□□ -1.19
COL12A1-208ENST00000486533 CRYBA1P05813 215 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 SLC25A6P12236 298 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 B4GALT1P15291 398 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 AADACP22760 399 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 NTF4P34130 210 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 RPL35P42766 123 aaKnown RBP7.62□□□□□ -1.19
COL12A1-208ENST00000486533 MEOX2P50222 304 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 FGF12P61328 243 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 PSG4Q00888 419 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 EWSR1Q01844 656 aaKnown RBP eCLIP7.62□□□□□ -1.19
COL12A1-208ENST00000486533 PLP2Q04941 152 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 PHLDA2Q53GA4 152 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 TMEM108Q6UXF1 575 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 STX12Q86Y82 276 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 ZDHHC23Q8IYP9 409 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 SUMF2Q8NBJ7 301 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 OR8U1Q8NH10 309 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 OR2AE1Q8NHA4 323 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 SFT2D1Q8WV19 159 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 APOBEC3DQ96AK3 386 aaPredicted RBP7.62□□□□□ -1.19
COL12A1-208ENST00000486533 MALSU1Q96EH3 234 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 BOD1Q96IK1 185 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 AKR1E2Q96JD6 320 aa7.62□□□□□ -1.19
COL12A1-208ENST00000486533 HDHD3Q9BSH5 251 aaPredicted RBP7.62□□□□□ -1.19
COL12A1-208ENST00000486533 HEATR1Q9H583 2144 aaKnown RBP7.61□□□□□ -1.19
COL12A1-208ENST00000486533 SONP18583 2426 aaKnown RBP7.61□□□□□ -1.19
COL12A1-208ENST00000486533 IGKV1D-8A0A087WSZ0 117 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 OR5B21A6NL26 309 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 SHISA9B4DS77 424 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 H0Y980 276 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 M0R1B8 84 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 AGPAT2O15120 278 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 SIGLEC5O15389 551 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 WNT2P09544 360 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 ZNF44P15621 663 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 ZNF14P17017 642 aaPredicted RBP7.61□□□□□ -1.19
COL12A1-208ENST00000486533 VDAC1P21796 283 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 MDH2P40926 338 aaKnown RBP7.61□□□□□ -1.19
COL12A1-208ENST00000486533 FOXG1P55316 489 aaPredicted RBP7.61□□□□□ -1.19
COL12A1-208ENST00000486533 RPL23AP62750 156 aaKnown RBP7.61□□□□□ -1.19
COL12A1-208ENST00000486533 SRSF3P84103 164 aaKnown RBP7.61□□□□□ -1.19
COL12A1-208ENST00000486533 TGFBR3Q03167 851 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 IL24Q13007 206 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 CLEC12BQ2HXU8 276 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 SPIN3Q5JUX0 258 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 TSPO2Q5TGU0 170 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 LYZL2Q7Z4W2 148 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 BHLHE23Q8NDY6 225 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 OR5D13Q8NGL4 314 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 AKR7LQ8NHP1 331 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 NEK7Q8TDX7 302 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 TCTEX1D2Q8WW35 142 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 ALKBH3Q96Q83 286 aaPredicted RBP7.61□□□□□ -1.19
COL12A1-208ENST00000486533 SLC7A10Q9NS82 523 aa7.61□□□□□ -1.19
COL12A1-208ENST00000486533 LYRM2Q9NU23 88 aaPredicted RBP7.61□□□□□ -1.19
COL12A1-208ENST00000486533 IGKV1-27A0A075B6S5 117 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 TRBV6-6A0A0A6YYG2 114 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 C5orf63A6NC05 138 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 COLCA2A8K830 154 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 FAM157AC9JC47 383 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 OVOL3O00110 214 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 DEGS1O15121 323 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 SCAF4O95104 1147 aaKnown RBP7.6□□□□□ -1.19
COL12A1-208ENST00000486533 IFNA5P01569 189 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 CD40P25942 277 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 ZNF92Q03936 586 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 GABRA6Q16445 453 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 PIGYQ3MUY2 71 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 AWAT1Q58HT5 328 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 SOHLH1Q5JUK2 328 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 AKR1C8PQ5T2L2 129 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 COLCA1Q6ZS62 124 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 SLC25A26Q70HW3 274 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 SLC35G3Q8N808 338 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 OR5A2Q8NGI9 324 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 OR2G3Q8NGZ4 309 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 FAM213BQ8TBF2 198 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 SECTM1Q8WVN6 248 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 ERGIC1Q969X5 290 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 Q9N2K0 584 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 KIAA1456Q9P272 454 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 MPC1Q9Y5U8 109 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 SLC25A15Q9Y619 301 aa7.6□□□□□ -1.19
COL12A1-208ENST00000486533 A0A087WWC5 75 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 C7orf77A4D0Y5 90 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 ANKRD30BLA7E2S9 258 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 RNF212BA8MTL3 300 aa7.59□□□□□ -1.19
COL12A1-208ENST00000486533 ZNF732B4DXR9 585 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms