RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 UBE2CO00762 179 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 HSPB1P04792 205 aaKnown RBP9.49□□□□□ -0.89
HDAC6-228ENST00000486227 LY6G6FQ5SQ64 297 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 CYB561D1Q8N8Q1 229 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 SMIM8Q96KF7 97 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 HES4Q9HCC6 221 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 FOXD3Q9UJU5 478 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-228ENST00000486227 MELTFP08582 738 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 OR5G3P0C626 314 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 TMEM11P17152 192 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 FGF12P61328 243 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 ARL16Q0P5N6 197 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 ANKRD55Q3KP44 614 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 POM121L2Q96KW2 1035 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 ZNF665Q9H7R5 613 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 OR2W1Q9Y3N9 320 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 IGHV3OR15-7A0A075B7D8 119 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 OOEPA6NGQ2 149 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 C1QL1O75973 258 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 MMP7P09237 267 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-228ENST00000486227 DANCRP0C864 163 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 SLC25A6P12236 298 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 CCL8P80075 99 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 SLC25A53Q5H9E4 307 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 ZNF826PQ6ZT77 177 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 SMIM15Q7Z3B0 74 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 BSCL2Q96G97 398 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-228ENST00000486227 DIRC2Q96SL1 478 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 GCGP01275 180 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 NTF3P20783 257 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 OR10J1P30954 320 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 DPPA3Q6W0C5 159 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 ANAPC16Q96DE5 110 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 TMEM56Q96MV1 263 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 TMEM14DPA8MWL7 114 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 CA11O75493 328 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 GZMHP20718 246 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 HABP2Q14520 560 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-228ENST00000486227 RAB24Q969Q5 203 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 C5orf66Q9H5L9 145 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 RNF115Q9Y4L5 304 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 BDP1A6H8Y1 2624 aa9.48□□□□□ -0.89
HDAC6-228ENST00000486227 NKX2-6A6NCS4 301 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 TMEM210A6NLX4 147 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 F2RL2O00254 374 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 CHST1O43916 411 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 OR7C2O60412 319 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 PITX3O75364 302 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 CYB5R3P00387 301 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-228ENST00000486227 MGST1P10620 155 aaKnown RBP9.47□□□□□ -0.89
HDAC6-228ENST00000486227 NHLH2Q02577 135 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 SLC38A11Q08AI6 406 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 POC1AQ8NBT0 407 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 IL22RA2Q969J5 263 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 SLC25A28Q96A46 364 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 LPAR2Q9HBW0 351 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 SLC35D1Q9NTN3 355 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 PPIAL4EA0A075B759 164 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 PPIAL4DF5H284 164 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 PPIAL4FP0DN26 164 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 FOLR2P14207 255 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 CSN1S1P47710 185 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 MRPS11P82912 194 aaKnown RBP9.47□□□□□ -0.89
HDAC6-228ENST00000486227 TIGITQ495A1 244 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 NEIL1Q96FI4 390 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-228ENST00000486227 ACY3Q96HD9 319 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 NUDT16L1Q9BRJ7 211 aaKnown RBP9.47□□□□□ -0.89
HDAC6-228ENST00000486227 MRPL13Q9BYD1 178 aaKnown RBP9.47□□□□□ -0.89
HDAC6-228ENST00000486227 PRDM14Q9GZV8 571 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 RNF122Q9H9V4 155 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 PPIAL4AQ9Y536 164 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 MSGN1A6NI15 193 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 CBY3A6NI87 242 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 HLA-GP17693 338 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 FGF8P55075 233 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-228ENST00000486227 OR4A4PQ8NGN8 299 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 MRGPRFQ96AM1 343 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 MOB3AQ96BX8 217 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 TNFSF10P50591 281 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 C1QL2Q7Z5L3 287 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 GINS3Q9BRX5 216 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 C1RLQ9NZP8 487 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 GOLT1BQ9Y3E0 138 aa9.47□□□□□ -0.89
HDAC6-228ENST00000486227 DHRS7CA6NNS2 312 aa9.46□□□□□ -0.89
HDAC6-228ENST00000486227 F8VVB4 439 aa9.46□□□□□ -0.89
HDAC6-228ENST00000486227 F8VWA3 439 aa9.46□□□□□ -0.89
HDAC6-228ENST00000486227 SYNGR2O43760 224 aa9.46□□□□□ -0.89
HDAC6-228ENST00000486227 EFNA2O43921 213 aa9.46□□□□□ -0.89
HDAC6-228ENST00000486227 SCTP09683 121 aa9.46□□□□□ -0.89
HDAC6-228ENST00000486227 HOXA5P20719 270 aa9.46□□□□□ -0.89
HDAC6-228ENST00000486227 CHRNA7P36544 502 aa9.46□□□□□ -0.89
HDAC6-228ENST00000486227 NPBWR2P48146 333 aa9.46□□□□□ -0.89
HDAC6-228ENST00000486227 TAS2R60P59551 318 aa9.46□□□□□ -0.89
HDAC6-228ENST00000486227 GABRA6Q16445 453 aa9.46□□□□□ -0.89
HDAC6-228ENST00000486227 OR4C5Q8NGB2 326 aa9.46□□□□□ -0.89
HDAC6-228ENST00000486227 DEPPQ9NTK1 212 aa9.46□□□□□ -0.89
HDAC6-228ENST00000486227 IL36GQ9NZH8 169 aa9.46□□□□□ -0.89
HDAC6-228ENST00000486227 FUT9Q9Y231 359 aa9.46□□□□□ -0.89
HDAC6-228ENST00000486227 AKAP6Q13023 2319 aa9.46□□□□□ -0.89
HDAC6-228ENST00000486227 FAM3BP58499 235 aaPredicted RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms