RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 LRRTM1Q86UE6 522 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 MS4A15Q8N5U1 240 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 OR2AK2Q8NG84 335 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 FBLIM1Q8WUP2 373 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 C4orf3Q8WVX3 66 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 YPEL2Q96QA6 119 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 OR51J1Q9H342 316 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 CHMP1AQ9HD42 196 aaPredicted RBP8.23□□□□□ -1.09
HMGN1-215ENST00000485550 FKBP14Q9NWM8 211 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 GHRLQ9UBU3 117 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 SCOCQ9UIL1 159 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 IGHV7-81A0A0B4J1V7 117 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 TRAV41A0A0B4J266 112 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 NBR2O15453 112 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 RGS11O94810 467 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 CDK1P06493 297 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 UBBP0CG47 229 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 SRMP19623 302 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 BLVRBP30043 206 aaPredicted RBP8.22□□□□□ -1.09
HMGN1-215ENST00000485550 PPIFP30405 207 aaKnown RBP8.22□□□□□ -1.09
HMGN1-215ENST00000485550 RPS27AP62979 156 aaKnown RBP8.22□□□□□ -1.09
HMGN1-215ENST00000485550 UNC119Q13432 240 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 KIAA0141Q14154 515 aaPredicted RBP8.22□□□□□ -1.09
HMGN1-215ENST00000485550 MED22Q15528 200 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 HMGN3Q15651 99 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 C5orf64Q2M2E5 130 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 HSD17B12Q53GQ0 312 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 RPL39P5Q59GN2 51 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 C1orf100Q5SVJ3 147 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 C6orf141Q5SZD1 244 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 LIN54Q6MZP7 749 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 FAM131AQ6UXB0 335 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 ZNF833PQ6ZTB9 187 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 ZNF554Q86TJ5 538 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 ZNF491Q8N8L2 437 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 OR1N2Q8NGR9 330 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 CASTOR1Q8WTX7 329 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 THRSPQ92748 146 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 TMEM203Q969S6 136 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 MND1Q9BWT6 205 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 TMEM59Q9BXS4 323 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 PARP12Q9H0J9 701 aaKnown RBP8.22□□□□□ -1.09
HMGN1-215ENST00000485550 IFI27L2Q9H2X8 130 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 PLEKHJ1Q9NW61 149 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 ABRACLQ9P1F3 81 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 STEAP1Q9UHE8 339 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 A3GALT2U3KPV4 340 aa8.22□□□□□ -1.09
HMGN1-215ENST00000485550 HYDINQ4G0P3 5121 aa8.21□□□□□ -1.09
HMGN1-215ENST00000485550 A0A0A6YYD4 124 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 FCN1O00602 326 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 SOCS1O15524 211 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 LY86O95711 162 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 HLA-DRB1P01911 266 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 RAB9AP51151 201 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 GNB1P62873 340 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 P2RY14Q15391 338 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 SPHARQ15513 63 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 ECSCRQ19T08 205 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 ASPHD1Q5U4P2 390 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 LIPKQ5VXJ0 399 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 SBSPONQ8IVN8 264 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 KCNG3Q8TAE7 436 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 ABHD14BQ96IU4 210 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 CLCC1Q96S66 551 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 HDHD3Q9BSH5 251 aaPredicted RBP8.21□□□□□ -1.1
HMGN1-215ENST00000485550 ALX4Q9H161 411 aaPredicted RBP8.21□□□□□ -1.1
HMGN1-215ENST00000485550 FBXL15Q9H469 300 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 KIAA1456Q9P272 454 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 RNF150Q9ULK6 438 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 VSIG4Q9Y279 399 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 FBXO7Q9Y3I1 522 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 LRRC42Q9Y546 428 aa8.21□□□□□ -1.1
HMGN1-215ENST00000485550 TMEM14DPA8MWL7 114 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 I3L521 148 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 CASQ2O14958 399 aaPredicted RBP8.2□□□□□ -1.1
HMGN1-215ENST00000485550 IGLV1-40P01703 118 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 GSTP1P09211 210 aaKnown RBP8.2□□□□□ -1.1
HMGN1-215ENST00000485550 HSMCR30P0CW71 290 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 CT45A6P0DMU7 189 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 CT45A5P0DMU8 189 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 CT45A7P0DMV0 189 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 CEACAM6P40199 344 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 CX3CL1P78423 397 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 NDPQ00604 133 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 ZNF616Q08AN1 781 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 FHL3Q13643 280 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 PLGLAQ15195 96 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 DRAXINQ8NBI3 349 aaPredicted RBP8.2□□□□□ -1.1
HMGN1-215ENST00000485550 NPBQ8NG41 125 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 MYOZ3Q8TDC0 251 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 ABHD5Q8WTS1 349 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 PHYHIPQ92561 330 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 UBE2E2Q96LR5 201 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 TM2D1Q9BX74 207 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 LPAR5Q9H1C0 372 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 SCN3BQ9NY72 215 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 PIPOXQ9P0Z9 390 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 OR1A1Q9P1Q5 309 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 SLC23A1Q9UHI7 598 aa8.2□□□□□ -1.1
HMGN1-215ENST00000485550 AK3Q9UIJ7 227 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms