RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 OR5P3Q8WZ94 311 aa1.93□□□□□ -2.1
SMC4-215ENST00000484799 PTH2Q96A98 100 aa1.93□□□□□ -2.1
SMC4-215ENST00000484799 OPTNQ96CV9 577 aa1.93□□□□□ -2.1
SMC4-215ENST00000484799 MS4A6EQ96DS6 147 aa1.93□□□□□ -2.1
SMC4-215ENST00000484799 C1QTNF6Q9BXI9 259 aa1.93□□□□□ -2.1
SMC4-215ENST00000484799 DERL2Q9GZP9 239 aa1.93□□□□□ -2.1
SMC4-215ENST00000484799 OR5V1Q9UGF6 321 aa1.93□□□□□ -2.1
SMC4-215ENST00000484799 SLC23A2Q9UGH3 650 aa1.93□□□□□ -2.1
SMC4-215ENST00000484799 ALG5Q9Y673 324 aa1.93□□□□□ -2.1
SMC4-215ENST00000484799 R4GN34 69 aa1.93□□□□□ -2.1
SMC4-215ENST00000484799 U3KQK5 164 aa1.93□□□□□ -2.1
SMC4-215ENST00000484799 IGKV1-12A0A0C4DH73 117 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 LINC00862A6NCI5 91 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 C21orf140B9A014 251 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 SLC25A20O43772 301 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 DCTN3O75935 186 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 CPSF4O95639 269 aaKnown RBP1.92□□□□□ -2.1
SMC4-215ENST00000484799 IGKV1D-12P01611 117 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 IGHMP01871 453 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 IL3P08700 152 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 CD7P09564 240 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 ZNF708P17019 499 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 CRABP1P29762 137 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 CEBPGP53567 150 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 SNAP25P60880 206 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 RPS24P62847 133 aaKnown RBP1.92□□□□□ -2.1
SMC4-215ENST00000484799 SLC35A2P78381 396 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 HPCAP84074 193 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 OR8G1Q15617 311 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 BATFQ16520 125 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 MESTQ5EB52 335 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 SLC51BQ86UW2 128 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 OR8J2Q8NGG1 315 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 Q8WTZ3 238 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 RAB8BQ92930 207 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 TESCQ96BS2 214 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 C8orf76Q96K31 380 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 TM2D3Q9BRN9 247 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 UCK1Q9HA47 277 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 HRASLSQ9HDD0 168 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 C3orf18Q9UK00 162 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 MRPS16Q9Y3D3 137 aaKnown RBP1.92□□□□□ -2.1
SMC4-215ENST00000484799 HDGFL3Q9Y3E1 203 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 PLB1Q6P1J6 1458 aa1.92□□□□□ -2.1
SMC4-215ENST00000484799 KMT2EQ8IZD2 1858 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 IGKV1D-37A0A075B6S9 117 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 A0A1B0GU33 70 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 VGLL3A8MV65 326 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 GOLGA6L19H0YKK7 550 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 LECT2O14960 151 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 IFNA5P01569 189 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 HLA-DRAP01903 254 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 CALB1P05937 261 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 RPL12P30050 165 aaKnown RBP1.91□□□□□ -2.1
SMC4-215ENST00000484799 NKX2-5P52952 324 aaPredicted RBP1.91□□□□□ -2.1
SMC4-215ENST00000484799 ACTBP60709 375 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 FGF12P61328 243 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 ACTG1P63261 375 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 BTN3A2P78410 334 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 TMEM267Q0VDI3 215 aaPredicted RBP1.91□□□□□ -2.1
SMC4-215ENST00000484799 PPP1R1AQ13522 171 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 ZNF141Q15928 474 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 IMPG1Q17R60 797 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 SPIN3Q5JUX0 258 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 ATP5L2Q7Z4Y8 100 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 ZFAND2AQ8N6M9 145 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 CCDC112Q8NEF3 446 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 MFSD8Q8NHS3 518 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 SLC25A44Q96H78 314 aaPredicted RBP1.91□□□□□ -2.1
SMC4-215ENST00000484799 SLC35G5Q96KT7 338 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 TBX5Q99593 518 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 HIGD2AQ9BW72 106 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 CDCA4Q9BXL8 241 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 OR51I2Q9H344 312 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 ZNF230Q9UIE0 474 aaPredicted RBP1.91□□□□□ -2.1
SMC4-215ENST00000484799 MMACHCQ9Y4U1 282 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 ATAD5Q96QE3 1844 aa1.91□□□□□ -2.1
SMC4-215ENST00000484799 BRD4O60885 1362 aaPredicted RBP1.9□□□□□ -2.11
SMC4-215ENST00000484799 A8MWP6 167 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 KCNK1O00180 336 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 TGOLN2O43493 480 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 MT-CO2P00403 227 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 IGLV6-57P01721 117 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 SERPINA6P08185 405 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 IGHV3-30-3P0DP02 117 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 HRES1P13985 223 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 UCHL3P15374 230 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 CXCL2P19875 107 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 CXCL3P19876 107 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 CA7P43166 264 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 SLCO1A2P46721 670 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 RAP1GDS1P52306 607 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 HERVK_113P63121 156 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 HLA-DRB3P79483 266 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 BSPH1Q075Z2 132 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 GNA13Q14344 377 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 PDGFRLQ15198 375 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 UAP1Q16222 522 aaPredicted RBP1.9□□□□□ -2.11
SMC4-215ENST00000484799 DEFB134Q4QY38 66 aa1.9□□□□□ -2.11
SMC4-215ENST00000484799 CLVS2Q5SYC1 327 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms