RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 PMS2P11Q13670 270 aa16.6■□□□□ 0.25
LIMS2-215ENST00000484252 FGFRL1Q8N441 504 aa16.6■□□□□ 0.25
LIMS2-215ENST00000484252 ZNF645Q8N7E2 425 aa16.6■□□□□ 0.25
LIMS2-215ENST00000484252 PRDM13Q9H4Q3 707 aa16.6■□□□□ 0.25
LIMS2-215ENST00000484252 TMEM242Q9NWH2 141 aa16.6■□□□□ 0.25
LIMS2-215ENST00000484252 TIMM9Q9Y5J7 89 aa16.6■□□□□ 0.25
LIMS2-215ENST00000484252 LY86O95711 162 aa16.6■□□□□ 0.25
LIMS2-215ENST00000484252 HAND1O96004 215 aa16.6■□□□□ 0.25
LIMS2-215ENST00000484252 RAB11AP62491 216 aa16.6■□□□□ 0.25
LIMS2-215ENST00000484252 ZNF726P1Q15940 193 aa16.6■□□□□ 0.25
LIMS2-215ENST00000484252 MRGPRGQ86SM5 289 aa16.6■□□□□ 0.25
LIMS2-215ENST00000484252 ZNF610Q8N9Z0 462 aa16.6■□□□□ 0.25
LIMS2-215ENST00000484252 OR13D1Q8NGV5 346 aa16.6■□□□□ 0.25
LIMS2-215ENST00000484252 RCC1LQ96I51 464 aaKnown RBP16.6■□□□□ 0.25
LIMS2-215ENST00000484252 VAX2Q9UIW0 290 aa16.6■□□□□ 0.25
LIMS2-215ENST00000484252 A0A1B0GV90 55 aa16.59■□□□□ 0.25
LIMS2-215ENST00000484252 ZFP92A6NM28 416 aa16.59■□□□□ 0.25
LIMS2-215ENST00000484252 TSTD3H0UI37 97 aa16.59■□□□□ 0.25
LIMS2-215ENST00000484252 CELA3BP08861 270 aa16.59■□□□□ 0.25
LIMS2-215ENST00000484252 RNF224P0DH78 156 aa16.59■□□□□ 0.25
LIMS2-215ENST00000484252 NDUFA6P56556 154 aa16.59■□□□□ 0.25
LIMS2-215ENST00000484252 MSMO1Q15800 293 aa16.59■□□□□ 0.25
LIMS2-215ENST00000484252 ZNF674Q2M3X9 581 aa16.59■□□□□ 0.25
LIMS2-215ENST00000484252 SPANXN5Q5MJ07 72 aa16.59■□□□□ 0.25
LIMS2-215ENST00000484252 LCN15Q6UWW0 184 aa16.59■□□□□ 0.25
LIMS2-215ENST00000484252 MYPOPQ86VE0 399 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-215ENST00000484252 SLC25A40Q8TBP6 338 aa16.59■□□□□ 0.25
LIMS2-215ENST00000484252 S100PBPQ96BU1 408 aa16.59■□□□□ 0.25
LIMS2-215ENST00000484252 VSIRQ9H7M9 311 aa16.59■□□□□ 0.25
LIMS2-215ENST00000484252 ZNF665Q9H7R5 613 aa16.59■□□□□ 0.25
LIMS2-215ENST00000484252 ZDHHC11Q9H8X9 412 aa16.59■□□□□ 0.25
LIMS2-215ENST00000484252 HES4Q9HCC6 221 aa16.59■□□□□ 0.25
LIMS2-215ENST00000484252 DOK5Q9P104 306 aa16.59■□□□□ 0.25
LIMS2-215ENST00000484252 WDFY4Q6ZS81 3184 aa16.59■□□□□ 0.25
LIMS2-215ENST00000484252 IFITM10A6NMD0 228 aa16.58■□□□□ 0.25
LIMS2-215ENST00000484252 CXCL1P09341 107 aa16.58■□□□□ 0.25
LIMS2-215ENST00000484252 IDH3GP51553 393 aaPredicted RBP16.58■□□□□ 0.25
LIMS2-215ENST00000484252 SLC38A11Q08AI6 406 aa16.58■□□□□ 0.25
LIMS2-215ENST00000484252 ZNF766Q5HY98 468 aa16.58■□□□□ 0.25
LIMS2-215ENST00000484252 TMEM14EPQ6UXP3 125 aa16.58■□□□□ 0.25
LIMS2-215ENST00000484252 TMEM178AQ8NBL3 297 aa16.58■□□□□ 0.25
LIMS2-215ENST00000484252 TAF15Q92804 592 aaKnown RBP eCLIP16.58■□□□□ 0.25
LIMS2-215ENST00000484252 GALMQ96C23 342 aa16.58■□□□□ 0.25
LIMS2-215ENST00000484252 OR4C12Q96R67 309 aa16.58■□□□□ 0.25
LIMS2-215ENST00000484252 DCAF16Q9NXF7 216 aa16.58■□□□□ 0.25
LIMS2-215ENST00000484252 TGOLN2O43493 480 aa16.58■□□□□ 0.24
LIMS2-215ENST00000484252 ERVFRD-1P60508 538 aa16.58■□□□□ 0.24
LIMS2-215ENST00000484252 TNFRSF9Q07011 255 aa16.58■□□□□ 0.24
LIMS2-215ENST00000484252 SSX2Q16385 188 aa16.58■□□□□ 0.24
LIMS2-215ENST00000484252 SLC35E4Q6ICL7 350 aa16.58■□□□□ 0.24
LIMS2-215ENST00000484252 ZNF343Q6P1L6 599 aa16.58■□□□□ 0.24
LIMS2-215ENST00000484252 INO80CQ6PI98 192 aaPredicted RBP16.58■□□□□ 0.24
LIMS2-215ENST00000484252 CA5BP1Q8WTZ4 195 aa16.58■□□□□ 0.24
LIMS2-215ENST00000484252 LOXL4Q96JB6 756 aa16.58■□□□□ 0.24
LIMS2-215ENST00000484252 HSPB7Q9UBY9 170 aa16.58■□□□□ 0.24
LIMS2-215ENST00000484252 FREM2Q5SZK8 3169 aa16.57■□□□□ 0.24
LIMS2-215ENST00000484252 TNFSF15O95150 251 aa16.57■□□□□ 0.24
LIMS2-215ENST00000484252 IGHV1-2P23083 117 aa16.57■□□□□ 0.24
LIMS2-215ENST00000484252 DDTP30046 118 aa16.57■□□□□ 0.24
LIMS2-215ENST00000484252 ARG2P78540 354 aa16.57■□□□□ 0.24
LIMS2-215ENST00000484252 ATP6V1FQ16864 119 aa16.57■□□□□ 0.24
LIMS2-215ENST00000484252 CENPVQ7Z7K6 275 aaPredicted RBP16.57■□□□□ 0.24
LIMS2-215ENST00000484252 VASH2Q86V25 355 aa16.57■□□□□ 0.24
LIMS2-215ENST00000484252 UBALD1Q8TB05 177 aa16.57■□□□□ 0.24
LIMS2-215ENST00000484252 RBKSQ9H477 322 aa16.57■□□□□ 0.24
LIMS2-215ENST00000484252 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.57■□□□□ 0.24
LIMS2-215ENST00000484252 OOEPA6NGQ2 149 aa16.57■□□□□ 0.24
LIMS2-215ENST00000484252 CYB5R3P00387 301 aaPredicted RBP16.57■□□□□ 0.24
LIMS2-215ENST00000484252 GRPP07492 148 aa16.57■□□□□ 0.24
LIMS2-215ENST00000484252 PSG7Q13046 419 aa16.57■□□□□ 0.24
LIMS2-215ENST00000484252 CATR1Q13166 79 aa16.57■□□□□ 0.24
LIMS2-215ENST00000484252 RNFT1Q5M7Z0 435 aa16.57■□□□□ 0.24
LIMS2-215ENST00000484252 TCTEX1D1Q8N7M0 179 aa16.57■□□□□ 0.24
LIMS2-215ENST00000484252 R4GN57 208 aa16.57■□□□□ 0.24
LIMS2-215ENST00000484252 MAP1LC3B2A6NCE7 125 aa16.56■□□□□ 0.24
LIMS2-215ENST00000484252 PPP1R2P9O14990 202 aa16.56■□□□□ 0.24
LIMS2-215ENST00000484252 RND2P52198 227 aa16.56■□□□□ 0.24
LIMS2-215ENST00000484252 SPCS3P61009 180 aa16.56■□□□□ 0.24
LIMS2-215ENST00000484252 ERVS71-1P61550 626 aa16.56■□□□□ 0.24
LIMS2-215ENST00000484252 MAP1LC3BQ9GZQ8 125 aa16.56■□□□□ 0.24
LIMS2-215ENST00000484252 URGCP-MRPS24S4R325 110 aa16.56■□□□□ 0.24
LIMS2-215ENST00000484252 TGIF2-C20orf24A0A0A6YYL0 155 aa16.55■□□□□ 0.24
LIMS2-215ENST00000484252 C1QTNF9BB2RNN3 333 aa16.55■□□□□ 0.24
LIMS2-215ENST00000484252 CLDN34H7C241 214 aa16.55■□□□□ 0.24
LIMS2-215ENST00000484252 CLDN1O95832 211 aa16.55■□□□□ 0.24
LIMS2-215ENST00000484252 P0C879 139 aa16.55■□□□□ 0.24
LIMS2-215ENST00000484252 SP9P0CG40 484 aa16.55■□□□□ 0.24
LIMS2-215ENST00000484252 IL2RGP31785 369 aa16.55■□□□□ 0.24
LIMS2-215ENST00000484252 EIF4EBP1Q13541 118 aaPredicted RBP16.55■□□□□ 0.24
LIMS2-215ENST00000484252 ALKBH6Q3KRA9 238 aa16.55■□□□□ 0.24
LIMS2-215ENST00000484252 PLA2G2CQ5R387 149 aa16.55■□□□□ 0.24
LIMS2-215ENST00000484252 SSX7Q7RTT5 188 aa16.55■□□□□ 0.24
LIMS2-215ENST00000484252 C1orf87Q8N0U7 546 aa16.55■□□□□ 0.24
LIMS2-215ENST00000484252 OR10D4PQ8NGN7 298 aa16.55■□□□□ 0.24
LIMS2-215ENST00000484252 SSX3Q99909 188 aa16.55■□□□□ 0.24
LIMS2-215ENST00000484252 C2orf88Q9BSF0 95 aa16.55■□□□□ 0.24
LIMS2-215ENST00000484252 SDF2L1Q9HCN8 221 aa16.55■□□□□ 0.24
LIMS2-215ENST00000484252 ESPL1Q14674 2120 aa16.55■□□□□ 0.24
LIMS2-215ENST00000484252 UBE2L5PA0A1B0GUS4 154 aa16.55■□□□□ 0.24
LIMS2-215ENST00000484252 CYB5BO43169 146 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms