RNA–Protein interactions for RNA: ENST00000483709.6

RASSF4-209, Transcript of Ras association domain family member 4, human

TSL 5

Gene RASSF4, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RASSF4-209	ENST00000483709	RBM38	Q9H0Z9	239 aa	Known RBP	11.81	□□□□□ -0.52
RASSF4-209	ENST00000483709	IFI27L2	Q9H2X8	130 aa		11.81	□□□□□ -0.52
RASSF4-209	ENST00000483709	IFT46	Q9NQC8	304 aa		11.81	□□□□□ -0.52
RASSF4-209	ENST00000483709	PIPOX	Q9P0Z9	390 aa		11.81	□□□□□ -0.52
RASSF4-209	ENST00000483709	EXTL2	Q9UBQ6	330 aa		11.81	□□□□□ -0.52
RASSF4-209	ENST00000483709	FBN1	P35555	2871 aa	Known RBP	11.81	□□□□□ -0.52
RASSF4-209	ENST00000483709	SAA2-SAA4	A0A096LPE2	208 aa		11.8	□□□□□ -0.52
RASSF4-209	ENST00000483709	CTDSP2	O14595	271 aa		11.8	□□□□□ -0.52
RASSF4-209	ENST00000483709	ITGB1BP1	O14713	200 aa		11.8	□□□□□ -0.52
RASSF4-209	ENST00000483709	TXNL1	O43396	289 aa		11.8	□□□□□ -0.52
RASSF4-209	ENST00000483709	LANCL1	O43813	399 aa		11.8	□□□□□ -0.52
RASSF4-209	ENST00000483709	IGKV1D-33	P01593	117 aa		11.8	□□□□□ -0.52
RASSF4-209	ENST00000483709	IGKV1-33	P01594	117 aa		11.8	□□□□□ -0.52
RASSF4-209	ENST00000483709	HLA-DQB1	P01920	261 aa		11.8	□□□□□ -0.52
RASSF4-209	ENST00000483709	SAA2	P0DJI9	122 aa	Predicted RBP	11.8	□□□□□ -0.52
RASSF4-209	ENST00000483709	FBLN7	Q53RD9	439 aa		11.8	□□□□□ -0.52
RASSF4-209	ENST00000483709	CNIH2	Q6PI25	160 aa		11.8	□□□□□ -0.52
RASSF4-209	ENST00000483709	C12orf54	Q6X4T0	127 aa		11.8	□□□□□ -0.52
RASSF4-209	ENST00000483709		Q6ZSV7	163 aa		11.8	□□□□□ -0.52
RASSF4-209	ENST00000483709	SNX29P2	Q8IUI4	249 aa		11.8	□□□□□ -0.52
RASSF4-209	ENST00000483709	SLC25A33	Q9BSK2	321 aa		11.8	□□□□□ -0.52
RASSF4-209	ENST00000483709	MIXL1	Q9H2W2	232 aa		11.8	□□□□□ -0.52
RASSF4-209	ENST00000483709	ANXA10	Q9UJ72	324 aa		11.8	□□□□□ -0.52
RASSF4-209	ENST00000483709	RBM7	Q9Y580	266 aa	Known RBP	11.8	□□□□□ -0.52
RASSF4-209	ENST00000483709	FAM90A9P	A6NNJ1	464 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	RAB29	O14966	203 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	NDUFA7	O95182	113 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	DIRAS3	O95661	229 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	CTXN2	P0C2S0	81 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	OR8U9	P0C7N5	309 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	TMEM11	P17152	192 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	MDK	P21741	143 aa	Predicted RBP	11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	GPR12	P47775	334 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	HNF4G	Q14541	408 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	AWAT1	Q58HT5	328 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	RPL39P5	Q59GN2	51 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	ZNF833P	Q6ZTB9	187 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	THNSL2	Q86YJ6	484 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	LAX1	Q8IWV1	398 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	OR8U1	Q8NH10	309 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	OR4F5	Q8NH21	305 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	S1PR3	Q99500	378 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	AGMAT	Q9BSE5	352 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	DCUN1D5	Q9BTE7	237 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	MRPL20	Q9BYC9	149 aa	Known RBP	11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	NPFFR1	Q9GZQ6	430 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	TOLLIP	Q9H0E2	274 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	ZNF221	Q9UK13	617 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	ADAM30	Q9UKF2	790 aa		11.79	□□□□□ -0.52
RASSF4-209	ENST00000483709	ZNF736	B4DX44	427 aa	Predicted RBP	11.78	□□□□□ -0.52
RASSF4-209	ENST00000483709		J3QRK9	145 aa		11.78	□□□□□ -0.52
RASSF4-209	ENST00000483709	OR2F2	O95006	317 aa		11.78	□□□□□ -0.52
RASSF4-209	ENST00000483709	NFYA	P23511	347 aa	Predicted RBP	11.78	□□□□□ -0.52
RASSF4-209	ENST00000483709	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.78	□□□□□ -0.52
RASSF4-209	ENST00000483709	OR4C13	Q8NGP0	309 aa		11.78	□□□□□ -0.52
RASSF4-209	ENST00000483709	MCFD2	Q8NI22	146 aa		11.78	□□□□□ -0.52
RASSF4-209	ENST00000483709	RBM14	Q96PK6	669 aa	Known RBP	11.78	□□□□□ -0.52
RASSF4-209	ENST00000483709	SLIRP	Q9GZT3	109 aa	Known RBP	11.78	□□□□□ -0.52
RASSF4-209	ENST00000483709	GHITM	Q9H3K2	345 aa		11.78	□□□□□ -0.52
RASSF4-209	ENST00000483709	BEX1	Q9HBH7	125 aa		11.78	□□□□□ -0.52
RASSF4-209	ENST00000483709	ATR	Q13535	2644 aa		11.78	□□□□□ -0.52
RASSF4-209	ENST00000483709	ZNF701	M0R085	212 aa	Predicted RBP	11.77	□□□□□ -0.53
RASSF4-209	ENST00000483709	CD1B	P29016	333 aa		11.77	□□□□□ -0.53
RASSF4-209	ENST00000483709	COMP	P49747	757 aa	Predicted RBP	11.77	□□□□□ -0.53
RASSF4-209	ENST00000483709	HABP2	Q14520	560 aa	Predicted RBP	11.77	□□□□□ -0.53
RASSF4-209	ENST00000483709	RNASE12	Q5GAN4	147 aa	Known RBP	11.77	□□□□□ -0.53
RASSF4-209	ENST00000483709	FAM71F2	Q6NXP2	309 aa		11.77	□□□□□ -0.53
RASSF4-209	ENST00000483709	C16orf82	Q7Z2V1	217 aa		11.77	□□□□□ -0.53
RASSF4-209	ENST00000483709	SPATA3	Q8NHX4	192 aa		11.77	□□□□□ -0.53
RASSF4-209	ENST00000483709	SNAPC3	Q92966	411 aa		11.77	□□□□□ -0.53
RASSF4-209	ENST00000483709	RBMXL1	Q96E39	390 aa	Known RBP	11.77	□□□□□ -0.53
RASSF4-209	ENST00000483709	EAF1	Q96JC9	268 aa	Predicted RBP	11.77	□□□□□ -0.53
RASSF4-209	ENST00000483709	AKR1E2	Q96JD6	320 aa		11.77	□□□□□ -0.53
RASSF4-209	ENST00000483709	NABP2	Q9BQ15	211 aa		11.77	□□□□□ -0.53
RASSF4-209	ENST00000483709	ZNF251	Q9BRH9	671 aa		11.77	□□□□□ -0.53
RASSF4-209	ENST00000483709	OR2D2	Q9H210	308 aa		11.77	□□□□□ -0.53
RASSF4-209	ENST00000483709	CLPSL1	A2RUU4	121 aa		11.76	□□□□□ -0.53
RASSF4-209	ENST00000483709	DPPA5	A6NC42	116 aa		11.76	□□□□□ -0.53
RASSF4-209	ENST00000483709	TSPAN9	O75954	239 aa		11.76	□□□□□ -0.53
RASSF4-209	ENST00000483709	CT45A6	P0DMU7	189 aa		11.76	□□□□□ -0.53
RASSF4-209	ENST00000483709	CT45A5	P0DMU8	189 aa		11.76	□□□□□ -0.53
RASSF4-209	ENST00000483709	CT45A7	P0DMV0	189 aa		11.76	□□□□□ -0.53
RASSF4-209	ENST00000483709	BLCAP	P62952	87 aa		11.76	□□□□□ -0.53
RASSF4-209	ENST00000483709	LSAMP	Q13449	338 aa		11.76	□□□□□ -0.53
RASSF4-209	ENST00000483709	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.76	□□□□□ -0.53
RASSF4-209	ENST00000483709	GLDN	Q6ZMI3	551 aa	Predicted RBP	11.76	□□□□□ -0.53
RASSF4-209	ENST00000483709	OR2T10	Q8NGZ9	312 aa		11.76	□□□□□ -0.53
RASSF4-209	ENST00000483709	LINC01006	Q8NI28	216 aa		11.76	□□□□□ -0.53
RASSF4-209	ENST00000483709	GPX8	Q8TED1	209 aa		11.76	□□□□□ -0.53
RASSF4-209	ENST00000483709	DIRAS2	Q96HU8	199 aa		11.76	□□□□□ -0.53
RASSF4-209	ENST00000483709	PRSS22	Q9GZN4	317 aa		11.76	□□□□□ -0.53
RASSF4-209	ENST00000483709	RANBP3	Q9H6Z4	567 aa	Predicted RBP	11.76	□□□□□ -0.53
RASSF4-209	ENST00000483709	SCPEP1	Q9HB40	452 aa		11.76	□□□□□ -0.53
RASSF4-209	ENST00000483709	NECAP2	Q9NVZ3	263 aa		11.76	□□□□□ -0.53
RASSF4-209	ENST00000483709	NDUFA13	Q9P0J0	144 aa		11.76	□□□□□ -0.53
RASSF4-209	ENST00000483709	SIGLEC9	Q9Y336	463 aa		11.76	□□□□□ -0.53
RASSF4-209	ENST00000483709		A0A1B0GUS0	222 aa		11.75	□□□□□ -0.53
RASSF4-209	ENST00000483709	SH2D7	A6NKC9	451 aa	Predicted RBP	11.75	□□□□□ -0.53
RASSF4-209	ENST00000483709	HAX1	O00165	279 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms