RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 CEACAM6P40199 344 aa14.31□□□□□ -0.12
HDAC6-225ENST00000483506 ZNF260Q3ZCT1 412 aa14.31□□□□□ -0.12
HDAC6-225ENST00000483506 CDNFQ49AH0 187 aa14.31□□□□□ -0.12
HDAC6-225ENST00000483506 ZNF736B4DX44 427 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-225ENST00000483506 M0QZ24 198 aa14.3□□□□□ -0.12
HDAC6-225ENST00000483506 RAB29O14966 203 aa14.3□□□□□ -0.12
HDAC6-225ENST00000483506 ST8SIA5O15466 376 aa14.3□□□□□ -0.12
HDAC6-225ENST00000483506 HSPA12AO43301 675 aa14.3□□□□□ -0.12
HDAC6-225ENST00000483506 VSIG10L2P0DP72 767 aa14.3□□□□□ -0.12
HDAC6-225ENST00000483506 OR3A3P47888 321 aa14.3□□□□□ -0.12
HDAC6-225ENST00000483506 ARFRP1Q13795 201 aa14.3□□□□□ -0.12
HDAC6-225ENST00000483506 PNLIPRP3Q17RR3 467 aa14.3□□□□□ -0.12
HDAC6-225ENST00000483506 TMEM95Q3KNT9 176 aa14.3□□□□□ -0.12
HDAC6-225ENST00000483506 OR8H1Q8NGG4 311 aa14.3□□□□□ -0.12
HDAC6-225ENST00000483506 NABP2Q9BQ15 211 aa14.3□□□□□ -0.12
HDAC6-225ENST00000483506 MRPL20Q9BYC9 149 aaKnown RBP14.3□□□□□ -0.12
HDAC6-225ENST00000483506 C11orf54Q9H0W9 315 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-225ENST00000483506 PLSCR3Q9NRY6 295 aa14.3□□□□□ -0.12
HDAC6-225ENST00000483506 ELF5Q9UKW6 265 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-225ENST00000483506 TET2Q6N021 2002 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-225ENST00000483506 TRBV6-7A0A0A0MS04 114 aa14.29□□□□□ -0.12
HDAC6-225ENST00000483506 GSTT2P0CG29 244 aa14.29□□□□□ -0.12
HDAC6-225ENST00000483506 GSTT2BP0CG30 244 aa14.29□□□□□ -0.12
HDAC6-225ENST00000483506 TALDO1P37837 337 aa14.29□□□□□ -0.12
HDAC6-225ENST00000483506 LSM3P62310 102 aaKnown RBP14.29□□□□□ -0.12
HDAC6-225ENST00000483506 PITPNAQ00169 270 aa14.29□□□□□ -0.12
HDAC6-225ENST00000483506 HNF4GQ14541 408 aa14.29□□□□□ -0.12
HDAC6-225ENST00000483506 SLC25A46Q96AG3 418 aa14.29□□□□□ -0.12
HDAC6-225ENST00000483506 MRPS26Q9BYN8 205 aaKnown RBP14.29□□□□□ -0.12
HDAC6-225ENST00000483506 DCSTAMPQ9H295 470 aa14.29□□□□□ -0.12
HDAC6-225ENST00000483506 RDH8Q9NYR8 311 aa14.29□□□□□ -0.12
HDAC6-225ENST00000483506 ZNF230Q9UIE0 474 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-225ENST00000483506 TMEM235A6NFC5 223 aa14.28□□□□□ -0.12
HDAC6-225ENST00000483506 SH2D7A6NKC9 451 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-225ENST00000483506 ARSJQ5FYB0 599 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-225ENST00000483506 ANKRD13BQ86YJ7 626 aa14.28□□□□□ -0.12
HDAC6-225ENST00000483506 Q8N9W7 124 aa14.28□□□□□ -0.12
HDAC6-225ENST00000483506 KCTD12Q96CX2 325 aaKnown RBP14.28□□□□□ -0.12
HDAC6-225ENST00000483506 S1PR3Q99500 378 aa14.28□□□□□ -0.12
HDAC6-225ENST00000483506 ABCG5Q9H222 651 aa14.28□□□□□ -0.12
HDAC6-225ENST00000483506 LIN7CQ9NUP9 197 aaKnown RBP14.28□□□□□ -0.12
HDAC6-225ENST00000483506 IGKV1D-8A0A087WSZ0 117 aa14.27□□□□□ -0.13
HDAC6-225ENST00000483506 PEX14O75381 377 aa14.27□□□□□ -0.13
HDAC6-225ENST00000483506 FBXO24O75426 580 aa14.27□□□□□ -0.13
HDAC6-225ENST00000483506 GABARAPO95166 117 aa14.27□□□□□ -0.13
HDAC6-225ENST00000483506 IGHG2P01859 326 aa14.27□□□□□ -0.13
HDAC6-225ENST00000483506 ALDH3B2P48448 385 aa14.27□□□□□ -0.13
HDAC6-225ENST00000483506 NCS1P62166 190 aa14.27□□□□□ -0.13
HDAC6-225ENST00000483506 RPL39P5Q59GN2 51 aa14.27□□□□□ -0.13
HDAC6-225ENST00000483506 IGSF11Q5DX21 431 aa14.27□□□□□ -0.13
HDAC6-225ENST00000483506 FAM71E2Q8N5Q1 922 aa14.27□□□□□ -0.13
HDAC6-225ENST00000483506 NUDCD2Q8WVJ2 157 aa14.27□□□□□ -0.13
HDAC6-225ENST00000483506 MAFIPQ8WZ33 124 aa14.27□□□□□ -0.13
HDAC6-225ENST00000483506 ABHD14BQ96IU4 210 aa14.27□□□□□ -0.13
HDAC6-225ENST00000483506 GAB2Q9UQC2 676 aa14.27□□□□□ -0.13
HDAC6-225ENST00000483506 SSX5O60225 188 aa14.26□□□□□ -0.13
HDAC6-225ENST00000483506 PROP1O75360 226 aa14.26□□□□□ -0.13
HDAC6-225ENST00000483506 CT45A6P0DMU7 189 aa14.26□□□□□ -0.13
HDAC6-225ENST00000483506 CT45A5P0DMU8 189 aa14.26□□□□□ -0.13
HDAC6-225ENST00000483506 CT45A7P0DMV0 189 aa14.26□□□□□ -0.13
HDAC6-225ENST00000483506 VBP1P61758 197 aa14.26□□□□□ -0.13
HDAC6-225ENST00000483506 CTF1Q16619 201 aa14.26□□□□□ -0.13
HDAC6-225ENST00000483506 C2orf68Q2NKX9 166 aa14.26□□□□□ -0.13
HDAC6-225ENST00000483506 TREML4Q6UXN2 200 aa14.26□□□□□ -0.13
HDAC6-225ENST00000483506 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.26□□□□□ -0.13
HDAC6-225ENST00000483506 OR10J5Q8NHC4 309 aa14.26□□□□□ -0.13
HDAC6-225ENST00000483506 PHF21AQ96BD5 680 aa14.26□□□□□ -0.13
HDAC6-225ENST00000483506 OR5H14A6NHG9 310 aa14.25□□□□□ -0.13
HDAC6-225ENST00000483506 NCBP2LA6PVI3 153 aaKnown RBP14.25□□□□□ -0.13
HDAC6-225ENST00000483506 BET1O15155 118 aa14.25□□□□□ -0.13
HDAC6-225ENST00000483506 TFAP2AP05549 437 aa14.25□□□□□ -0.13
HDAC6-225ENST00000483506 CD28P10747 220 aa14.25□□□□□ -0.13
HDAC6-225ENST00000483506 F2RL1P55085 397 aa14.25□□□□□ -0.13
HDAC6-225ENST00000483506 GNG2P59768 71 aa14.25□□□□□ -0.13
HDAC6-225ENST00000483506 UBE2NLQ5JXB2 153 aa14.25□□□□□ -0.13
HDAC6-225ENST00000483506 H1FOOQ8IZA3 346 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-225ENST00000483506 OR5AN1Q8NGI8 311 aa14.25□□□□□ -0.13
HDAC6-225ENST00000483506 MMP27Q9H306 513 aa14.25□□□□□ -0.13
HDAC6-225ENST00000483506 AUNIPQ9H7T9 357 aa14.25□□□□□ -0.13
HDAC6-225ENST00000483506 DIABLOQ9NR28 239 aa14.25□□□□□ -0.13
HDAC6-225ENST00000483506 TRAV18A0A075B6X5 111 aa14.24□□□□□ -0.13
HDAC6-225ENST00000483506 H0YJW9 148 aa14.24□□□□□ -0.13
HDAC6-225ENST00000483506 XRCC3O43542 346 aa14.24□□□□□ -0.13
HDAC6-225ENST00000483506 CTXN2P0C2S0 81 aa14.24□□□□□ -0.13
HDAC6-225ENST00000483506 ACTBP60709 375 aa14.24□□□□□ -0.13
HDAC6-225ENST00000483506 C9orf152Q5JTZ5 239 aa14.24□□□□□ -0.13
HDAC6-225ENST00000483506 NDUFA11Q86Y39 141 aa14.24□□□□□ -0.13
HDAC6-225ENST00000483506 C11orf44Q8N8P7 122 aa14.24□□□□□ -0.13
HDAC6-225ENST00000483506 OR5AU1Q8NGC0 362 aa14.24□□□□□ -0.13
HDAC6-225ENST00000483506 NAA50Q9GZZ1 169 aaKnown RBP14.24□□□□□ -0.13
HDAC6-225ENST00000483506 ZNF221Q9UK13 617 aa14.24□□□□□ -0.13
HDAC6-225ENST00000483506 ADARB2-AS1A8MUL3 147 aa14.23□□□□□ -0.13
HDAC6-225ENST00000483506 MC5RP33032 325 aa14.23□□□□□ -0.13
HDAC6-225ENST00000483506 GPR12P47775 334 aa14.23□□□□□ -0.13
HDAC6-225ENST00000483506 CD83Q01151 205 aa14.23□□□□□ -0.13
HDAC6-225ENST00000483506 CNIH2Q6PI25 160 aa14.23□□□□□ -0.13
HDAC6-225ENST00000483506 FAM131AQ6UXB0 335 aa14.23□□□□□ -0.13
HDAC6-225ENST00000483506 SLC35E3Q7Z769 313 aa14.23□□□□□ -0.13
HDAC6-225ENST00000483506 NPBQ8NG41 125 aa14.23□□□□□ -0.13
HDAC6-225ENST00000483506 RBMXL1Q96E39 390 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms