RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 MIDNQ504T8 468 aa9.94□□□□□ -0.82
SDC1-206ENST00000482879 C16orf87Q6PH81 154 aa9.94□□□□□ -0.82
SDC1-206ENST00000482879 LYG1Q8N1E2 194 aa9.94□□□□□ -0.82
SDC1-206ENST00000482879 OR4P4Q8NGL7 312 aa9.94□□□□□ -0.82
SDC1-206ENST00000482879 BORCS5Q969J3 196 aa9.94□□□□□ -0.82
SDC1-206ENST00000482879 ABHD14BQ96IU4 210 aa9.94□□□□□ -0.82
SDC1-206ENST00000482879 AGMATQ9BSE5 352 aa9.94□□□□□ -0.82
SDC1-206ENST00000482879 MS4A7Q9GZW8 240 aaPredicted RBP9.94□□□□□ -0.82
SDC1-206ENST00000482879 IFI27L2Q9H2X8 130 aa9.94□□□□□ -0.82
SDC1-206ENST00000482879 DPM3Q9P2X0 92 aa9.94□□□□□ -0.82
SDC1-206ENST00000482879 ZNF221Q9UK13 617 aa9.94□□□□□ -0.82
SDC1-206ENST00000482879 AMMECR1Q9Y4X0 333 aaPredicted RBP9.94□□□□□ -0.82
SDC1-206ENST00000482879 IGKV1D-13A0A0B4J2D9 117 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 NAP1L6A6NFF2 107 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 CENPXA8MT69 81 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 LEUTXA8MZ59 168 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 PLA2G10O15496 165 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 IGKV1-13P0DP09 117 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 EPHA1P21709 976 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 IL3RAP26951 378 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 SAA4P35542 130 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 GPR12P47775 334 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 BPIFB3P59826 476 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 IFITM3Q01628 133 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 MINOS1Q5TGZ0 78 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 LHFPL4Q7Z7J7 247 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 LDLRAD3Q86YD5 345 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 PIP4P2Q8N4L2 257 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 OR51S1Q8NGJ8 323 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 TERB2Q8NHR7 220 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 FAM216AQ8WUB2 273 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 SECTM1Q8WVN6 248 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 CREB3L1Q96BA8 519 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 MOB3AQ96BX8 217 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 PRRT1Q99946 306 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 C7orf50Q9BRJ6 194 aaKnown RBP9.93□□□□□ -0.82
SDC1-206ENST00000482879 BEX2Q9BXY8 128 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 SLC5A7Q9GZV3 580 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 OR2D2Q9H210 308 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 SCP2D1Q9UJQ7 156 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 TBL2Q9Y4P3 447 aaKnown RBP9.93□□□□□ -0.82
SDC1-206ENST00000482879 MINOS1-NBL1R4GNA1 71 aa9.93□□□□□ -0.82
SDC1-206ENST00000482879 OR5H14A6NHG9 310 aa9.92□□□□□ -0.82
SDC1-206ENST00000482879 LY6LH3BQJ8 138 aa9.92□□□□□ -0.82
SDC1-206ENST00000482879 RAB29O14966 203 aa9.92□□□□□ -0.82
SDC1-206ENST00000482879 CEACAM3P40198 252 aa9.92□□□□□ -0.82
SDC1-206ENST00000482879 LDLRAD2Q5SZI1 272 aa9.92□□□□□ -0.82
SDC1-206ENST00000482879 LHFPL1Q86WI0 220 aa9.92□□□□□ -0.82
SDC1-206ENST00000482879 ODF3L1Q8IXM7 274 aa9.92□□□□□ -0.82
SDC1-206ENST00000482879 C17orf50Q8WW18 174 aa9.92□□□□□ -0.82
SDC1-206ENST00000482879 TOMM40LQ969M1 308 aa9.92□□□□□ -0.82
SDC1-206ENST00000482879 RPEQ96AT9 228 aa9.92□□□□□ -0.82
SDC1-206ENST00000482879 MALSU1Q96EH3 234 aa9.92□□□□□ -0.82
SDC1-206ENST00000482879 GHITMQ9H3K2 345 aa9.92□□□□□ -0.82
SDC1-206ENST00000482879 PIPOXQ9P0Z9 390 aa9.92□□□□□ -0.82
SDC1-206ENST00000482879 FAM96BQ9Y3D0 163 aa9.92□□□□□ -0.82
SDC1-206ENST00000482879 HILPDAQ9Y5L2 63 aa9.92□□□□□ -0.82
SDC1-206ENST00000482879 SOX21Q9Y651 276 aaPredicted RBP9.92□□□□□ -0.82
SDC1-206ENST00000482879 SAA2-SAA4A0A096LPE2 208 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 A0A0U1RQK1 487 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 HSD17B6O14756 317 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 LYRM1O43325 122 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 SLC22A5O76082 557 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 SAA2P0DJI9 122 aaPredicted RBP9.91□□□□□ -0.82
SDC1-206ENST00000482879 PGAM2P15259 253 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 DIAPH2-AS1Q14236 149 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 SSX2Q16385 188 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 RPL39P5Q59GN2 51 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 TPTE2P1Q5T6R2 138 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 AADACL3Q5VUY0 350 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 LPCAT3Q6P1A2 487 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 IDO2Q6ZQW0 420 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 BCL6BQ8N143 479 aaPredicted RBP9.91□□□□□ -0.82
SDC1-206ENST00000482879 ZNF645Q8N7E2 425 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 C22orf15Q8WYQ4 148 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 ST6GALNAC6Q969X2 333 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 AJUBAQ96IF1 538 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 S1PR3Q99500 378 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 FXYD6Q9H0Q3 95 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 CCL28Q9NRJ3 127 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 SLC2A8Q9NY64 477 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 CDC42EP3Q9UKI2 254 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 TBC1D24Q9ULP9 559 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 GAB2Q9UQC2 676 aa9.91□□□□□ -0.82
SDC1-206ENST00000482879 INAFM1C9JVW0 142 aa9.9□□□□□ -0.82
SDC1-206ENST00000482879 GAPDHP04406 335 aaKnown RBP9.9□□□□□ -0.82
SDC1-206ENST00000482879 PAX6P26367 422 aa9.9□□□□□ -0.82
SDC1-206ENST00000482879 REG1BP48304 166 aa9.9□□□□□ -0.82
SDC1-206ENST00000482879 ZNF137PP52743 207 aa9.9□□□□□ -0.82
SDC1-206ENST00000482879 UCP3P55916 312 aa9.9□□□□□ -0.82
SDC1-206ENST00000482879 DEFA1P59665 94 aa9.9□□□□□ -0.82
SDC1-206ENST00000482879 DEFA3P59666 94 aa9.9□□□□□ -0.82
SDC1-206ENST00000482879 ASAH1Q13510 395 aa9.9□□□□□ -0.82
SDC1-206ENST00000482879 MZT2BQ6NZ67 158 aa9.9□□□□□ -0.82
SDC1-206ENST00000482879 ZNF833PQ6ZTB9 187 aa9.9□□□□□ -0.82
SDC1-206ENST00000482879 C9orf139Q6ZV77 190 aa9.9□□□□□ -0.82
SDC1-206ENST00000482879 DYNAPQ8N1N2 210 aa9.9□□□□□ -0.82
SDC1-206ENST00000482879 DRAM1Q8N682 238 aa9.9□□□□□ -0.82
SDC1-206ENST00000482879 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.9□□□□□ -0.82
SDC1-206ENST00000482879 OR13C8Q8NGS7 320 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms