RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 PTPRQQ9UMZ3 2332 aa12.54□□□□□ -0.4
ATG4B-220ENST00000482507 ZFP92A6NM28 416 aa12.53□□□□□ -0.4
ATG4B-220ENST00000482507 WDR1O75083 606 aa12.53□□□□□ -0.4
ATG4B-220ENST00000482507 HOXA5P20719 270 aa12.53□□□□□ -0.4
ATG4B-220ENST00000482507 GLIPR1P48060 266 aa12.53□□□□□ -0.4
ATG4B-220ENST00000482507 ERVK11-1P61568 191 aa12.53□□□□□ -0.4
ATG4B-220ENST00000482507 RAB11AP62491 216 aa12.53□□□□□ -0.4
ATG4B-220ENST00000482507 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-220ENST00000482507 SLC35E3Q7Z769 313 aa12.53□□□□□ -0.4
ATG4B-220ENST00000482507 MCEMP1Q8IX19 187 aa12.53□□□□□ -0.4
ATG4B-220ENST00000482507 MDS2Q8NDY4 140 aa12.53□□□□□ -0.4
ATG4B-220ENST00000482507 TCEAL7Q9BRU2 100 aa12.53□□□□□ -0.4
ATG4B-220ENST00000482507 ZMAT5Q9UDW3 170 aaKnown RBP12.53□□□□□ -0.4
ATG4B-220ENST00000482507 KCNS2Q9ULS6 477 aa12.53□□□□□ -0.4
ATG4B-220ENST00000482507 ZNF674Q2M3X9 581 aa12.53□□□□□ -0.4
ATG4B-220ENST00000482507 RCC1LQ96I51 464 aaKnown RBP12.53□□□□□ -0.4
ATG4B-220ENST00000482507 OR14J1Q9UGF5 321 aa12.53□□□□□ -0.4
ATG4B-220ENST00000482507 TRAPPC2LQ9UL33 140 aa12.53□□□□□ -0.4
ATG4B-220ENST00000482507 CD200P41217 278 aa12.52□□□□□ -0.4
ATG4B-220ENST00000482507 CEBPDP49716 269 aaPredicted RBP12.52□□□□□ -0.4
ATG4B-220ENST00000482507 PMP22Q01453 160 aa12.52□□□□□ -0.4
ATG4B-220ENST00000482507 RNFT1Q5M7Z0 435 aa12.52□□□□□ -0.4
ATG4B-220ENST00000482507 ZNF787Q6DD87 383 aa12.52□□□□□ -0.4
ATG4B-220ENST00000482507 SPNS3Q6ZMD2 512 aa12.52□□□□□ -0.4
ATG4B-220ENST00000482507 DRAM1Q8N682 238 aa12.52□□□□□ -0.4
ATG4B-220ENST00000482507 BCL2L14Q9BZR8 327 aa12.52□□□□□ -0.4
ATG4B-220ENST00000482507 DEFB127Q9H1M4 99 aa12.52□□□□□ -0.4
ATG4B-220ENST00000482507 OR51M1Q9H341 326 aa12.52□□□□□ -0.4
ATG4B-220ENST00000482507 DOK5Q9P104 306 aa12.52□□□□□ -0.4
ATG4B-220ENST00000482507 CDIPTO14735 213 aa12.52□□□□□ -0.41
ATG4B-220ENST00000482507 WISP2O76076 250 aa12.52□□□□□ -0.41
ATG4B-220ENST00000482507 BCL2P10415 239 aa12.52□□□□□ -0.41
ATG4B-220ENST00000482507 CEACAM6P40199 344 aa12.52□□□□□ -0.41
ATG4B-220ENST00000482507 TNFSF10P50591 281 aa12.52□□□□□ -0.41
ATG4B-220ENST00000482507 NDUFA6P56556 154 aa12.52□□□□□ -0.41
ATG4B-220ENST00000482507 LRRC75BQ2VPJ9 315 aa12.52□□□□□ -0.41
ATG4B-220ENST00000482507 ZNF766Q5HY98 468 aa12.52□□□□□ -0.41
ATG4B-220ENST00000482507 OR10G4Q8NGN3 311 aa12.52□□□□□ -0.41
ATG4B-220ENST00000482507 CA5BP1Q8WTZ4 195 aa12.52□□□□□ -0.41
ATG4B-220ENST00000482507 MBD3L1Q8WWY6 194 aa12.52□□□□□ -0.41
ATG4B-220ENST00000482507 C5orf30Q96GV9 206 aa12.52□□□□□ -0.41
ATG4B-220ENST00000482507 OR4C12Q96R67 309 aa12.52□□□□□ -0.41
ATG4B-220ENST00000482507 OR2J1Q9GZK6 312 aa12.52□□□□□ -0.41
ATG4B-220ENST00000482507 TMPRSS5Q9H3S3 457 aa12.52□□□□□ -0.41
ATG4B-220ENST00000482507 CISD1Q9NZ45 108 aaKnown RBP12.52□□□□□ -0.41
ATG4B-220ENST00000482507 SSUH2Q9Y2M2 353 aa12.52□□□□□ -0.41
ATG4B-220ENST00000482507 RBM7Q9Y580 266 aaKnown RBP12.52□□□□□ -0.41
ATG4B-220ENST00000482507 TPRP12270 2363 aaKnown RBP12.52□□□□□ -0.41
ATG4B-220ENST00000482507 RAB2AP61019 212 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 SPANXN5Q5MJ07 72 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 FBXW9Q5XUX1 488 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 SCGB1C1Q8TD33 95 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 WDYHV1Q96HA8 205 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 MBNL3Q9NUK0 354 aaKnown RBP12.51□□□□□ -0.41
ATG4B-220ENST00000482507 SPRR3Q9UBC9 169 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 CYB5BO43169 146 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 HIST1H2BKO60814 126 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 HIST1H2BJP06899 126 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 CD46P15529 392 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 HIST1H2BOP23527 126 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 HIST1H2BBP33778 126 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 HIST1H2BDP58876 126 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 HIST1H2BCP62807 126 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 HNF4GQ14541 408 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 HIST2H2BEQ16778 126 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.51□□□□□ -0.41
ATG4B-220ENST00000482507 CDPF1Q6NVV7 123 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 ZNF610Q8N9Z0 462 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 HIST1H2BHQ93079 126 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 HIST1H2BNQ99877 126 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 HIST1H2BMQ99879 126 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 SSX3Q99909 188 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 GGACTQ9BVM4 153 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 RTL8AQ9BWD3 113 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 SIRT7Q9NRC8 400 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 TREM2Q9NZC2 230 aa12.51□□□□□ -0.41
ATG4B-220ENST00000482507 CHD3Q12873 2000 aaKnown RBP12.51□□□□□ -0.41
ATG4B-220ENST00000482507 LRP5LA4QPB2 252 aa12.5□□□□□ -0.41
ATG4B-220ENST00000482507 CXorf65A6NEN9 183 aa12.5□□□□□ -0.41
ATG4B-220ENST00000482507 RAMP3O60896 148 aa12.5□□□□□ -0.41
ATG4B-220ENST00000482507 SMPD2O60906 423 aa12.5□□□□□ -0.41
ATG4B-220ENST00000482507 IGKV1D-33P01593 117 aa12.5□□□□□ -0.41
ATG4B-220ENST00000482507 IGKV1-33P01594 117 aa12.5□□□□□ -0.41
ATG4B-220ENST00000482507 IGHV2-70P01814 119 aa12.5□□□□□ -0.41
ATG4B-220ENST00000482507 TRGC2P03986 189 aa12.5□□□□□ -0.41
ATG4B-220ENST00000482507 MDH2P40926 338 aaKnown RBP12.5□□□□□ -0.41
ATG4B-220ENST00000482507 BEND4Q6ZU67 534 aa12.5□□□□□ -0.41
ATG4B-220ENST00000482507 FGFRL1Q8N441 504 aa12.5□□□□□ -0.41
ATG4B-220ENST00000482507 PSMG3Q9BT73 122 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-220ENST00000482507 WDR61Q9GZS3 305 aaKnown RBP12.5□□□□□ -0.41
ATG4B-220ENST00000482507 GTF3C1Q12789 2109 aa12.5□□□□□ -0.41
ATG4B-220ENST00000482507 TRBV23-1A0A0A0MS06 115 aa12.5□□□□□ -0.41
ATG4B-220ENST00000482507 PSPNO60542 156 aa12.5□□□□□ -0.41
ATG4B-220ENST00000482507 CEACAM4O75871 244 aa12.5□□□□□ -0.41
ATG4B-220ENST00000482507 TFF1P04155 84 aa12.5□□□□□ -0.41
ATG4B-220ENST00000482507 PGA5P0DJD9 388 aa12.5□□□□□ -0.41
ATG4B-220ENST00000482507 CDX1P47902 265 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-220ENST00000482507 ELLP55199 621 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-220ENST00000482507 GFI1BQ5VTD9 330 aa12.5□□□□□ -0.41
ATG4B-220ENST00000482507 MOB1BQ7L9L4 216 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms