RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 CMTM5Q96DZ9 223 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 GALNT14Q96FL9 552 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 ARL5BQ96KC2 179 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 EFCAB1Q9HAE3 211 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 BCL2L10Q9HD36 194 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 GID8Q9NWU2 228 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 ADA2Q9NZK5 511 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 CALML5Q9NZT1 146 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 SLC35A3Q9Y2D2 325 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 V9GYQ6 96 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 HRNRQ86YZ3 2850 aaPredicted RBP3.18□□□□□ -1.9
UPF3A-207ENST00000481131 NACAE9PAV3 2078 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 HECTD1Q9ULT8 2610 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 IGKV1D-42A0A075B6H8 117 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 TMED7-TICAM2A0A0A6YYA0 188 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 A0A1B0GWA3 101 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 LRRN3E7EW58 273 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 C19orf84I3L1E1 186 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 L7N2F9 121 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 CXCR6O00574 342 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 BCKDKO14874 412 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 AKR7A2O43488 359 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 ZNF682O95780 498 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 SERPINA1P01009 418 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 NPPAP01160 153 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 HLA-DPB1P04440 258 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 ELK4P28324 431 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 ERFP50548 548 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 PRR3P79522 188 aaKnown RBP3.17□□□□□ -1.9
UPF3A-207ENST00000481131 GNA13Q14344 377 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 TMEM176BQ3YBM2 270 aaPredicted RBP3.17□□□□□ -1.9
UPF3A-207ENST00000481131 THEM4Q5T1C6 240 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 HBMQ6B0K9 141 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 C3orf33Q6P1S2 294 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 C12orf54Q6X4T0 127 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 ARPINQ7Z6K5 226 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 PGAM4Q8N0Y7 254 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 CYB561D1Q8N8Q1 229 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 OR52E2Q8NGJ4 325 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 OR10D3Q8NH80 312 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 OR2V1Q8NHB1 315 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 FNDC9Q8TBE3 224 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 TMEM230Q96A57 120 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 CCDC124Q96CT7 223 aaKnown RBP3.17□□□□□ -1.9
UPF3A-207ENST00000481131 PARP12Q9H0J9 701 aaKnown RBP3.17□□□□□ -1.9
UPF3A-207ENST00000481131 NCOR1P1Q9H4R4 102 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 C12orf10Q9HB07 376 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 CRLF2Q9HC73 371 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 ACER3Q9NUN7 267 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 TAS2R1Q9NYW7 299 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 CD300AQ9UGN4 299 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 PSG11Q9UQ72 335 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 RCL1Q9Y2P8 373 aaKnown RBP3.17□□□□□ -1.9
UPF3A-207ENST00000481131 PKDREJQ9NTG1 2253 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 ALPK2Q86TB3 2170 aa3.17□□□□□ -1.9
UPF3A-207ENST00000481131 DCHS2Q6V1P9 2916 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 ADGRG4Q8IZF6 3080 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 A0A0B4J2E0 115 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 A0A1B0GUH1 482 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 A0A1B0GX12 115 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 SLC22A20A6NK97 555 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 hCG_2039718K7EN88 272 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 FAAHO00519 579 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 KPNA4O00629 521 aaPredicted RBP3.16□□□□□ -1.9
UPF3A-207ENST00000481131 SERPINB7O75635 380 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 FCN3O75636 299 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 STAG3L3P0CL85 134 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 GABRA1P14867 456 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 TUBG1P23258 451 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 ME2P23368 584 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 CXCR1P25024 350 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 KDELR2P33947 212 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 EIF1P41567 113 aaKnown RBP3.16□□□□□ -1.9
UPF3A-207ENST00000481131 POLR2HP52434 150 aaKnown RBP3.16□□□□□ -1.9
UPF3A-207ENST00000481131 OR2B6P58173 313 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 NCALDP61601 193 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 RAP1AP62834 184 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 EBI3Q14213 229 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 PTGES3Q15185 160 aaKnown RBP3.16□□□□□ -1.9
UPF3A-207ENST00000481131 OR1Q1Q15612 314 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 GLYATQ6IB77 296 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 ERICH5Q6P6B1 374 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 ZNF550Q7Z398 422 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 GRINAQ7Z429 371 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 NKAIN4Q8IVV8 208 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 WDFY1Q8IWB7 410 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 SLC30A8Q8IWU4 369 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 JAGN1Q8N5M9 183 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 C8orf31Q8N9H6 132 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 OR52E4Q8NGH9 312 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 PFN4Q8NHR9 129 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 PHF10Q8WUB8 498 aaKnown RBP3.16□□□□□ -1.9
UPF3A-207ENST00000481131 TMEM234Q8WY98 164 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 HOPXQ9BPY8 73 aaPredicted RBP3.16□□□□□ -1.9
UPF3A-207ENST00000481131 PRSS27Q9BQR3 290 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 VCXQ9H320 206 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 CACYBPQ9HB71 228 aaKnown RBP3.16□□□□□ -1.9
UPF3A-207ENST00000481131 TUBG2Q9NRH3 451 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 ZNF222Q9UK12 451 aa3.16□□□□□ -1.9
UPF3A-207ENST00000481131 CACNA1DQ01668 2161 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms