RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 RPL39P5Q59GN2 51 aa16.3■□□□□ 0.2
CTSA-206ENST00000480961 C12orf54Q6X4T0 127 aa16.3■□□□□ 0.2
CTSA-206ENST00000480961 Q6ZS49 121 aa16.3■□□□□ 0.2
CTSA-206ENST00000480961 SMIM31A0A1B0GVY4 71 aa16.29■□□□□ 0.2
CTSA-206ENST00000480961 FAM90A9PA6NNJ1 464 aa16.29■□□□□ 0.2
CTSA-206ENST00000480961 J3QRK9 145 aa16.29■□□□□ 0.2
CTSA-206ENST00000480961 NDUFA7O95182 113 aa16.29■□□□□ 0.2
CTSA-206ENST00000480961 IGKV1D-33P01593 117 aa16.29■□□□□ 0.2
CTSA-206ENST00000480961 IGKV1-33P01594 117 aa16.29■□□□□ 0.2
CTSA-206ENST00000480961 HLA-DQB1P01920 261 aa16.29■□□□□ 0.2
CTSA-206ENST00000480961 FAM106CPP0CH98 169 aa16.29■□□□□ 0.2
CTSA-206ENST00000480961 FOXL1Q12952 345 aa16.29■□□□□ 0.2
CTSA-206ENST00000480961 LIAT1Q6ZQX7 453 aa16.29■□□□□ 0.2
CTSA-206ENST00000480961 SNX29P2Q8IUI4 249 aa16.29■□□□□ 0.2
CTSA-206ENST00000480961 CMTM3Q96MX0 182 aa16.29■□□□□ 0.2
CTSA-206ENST00000480961 GINS4Q9BRT9 223 aa16.29■□□□□ 0.2
CTSA-206ENST00000480961 AGMATQ9BSE5 352 aa16.29■□□□□ 0.2
CTSA-206ENST00000480961 MRPL20Q9BYC9 149 aaKnown RBP16.29■□□□□ 0.2
CTSA-206ENST00000480961 RBM38Q9H0Z9 239 aaKnown RBP16.29■□□□□ 0.2
CTSA-206ENST00000480961 MIXL1Q9H2W2 232 aa16.29■□□□□ 0.2
CTSA-206ENST00000480961 RAB18Q9NP72 206 aa16.29■□□□□ 0.2
CTSA-206ENST00000480961 SH2D7A6NKC9 451 aaPredicted RBP16.28■□□□□ 0.2
CTSA-206ENST00000480961 RGS5O15539 181 aa16.28■□□□□ 0.2
CTSA-206ENST00000480961 LANCL1O43813 399 aa16.28■□□□□ 0.2
CTSA-206ENST00000480961 OR8U9P0C7N5 309 aa16.28■□□□□ 0.2
CTSA-206ENST00000480961 RPL15P61313 204 aaKnown RBP16.28■□□□□ 0.2
CTSA-206ENST00000480961 HOGA1Q86XE5 327 aa16.28■□□□□ 0.2
CTSA-206ENST00000480961 OR8U1Q8NH10 309 aa16.28■□□□□ 0.2
CTSA-206ENST00000480961 OR4F5Q8NH21 305 aa16.28■□□□□ 0.2
CTSA-206ENST00000480961 SPATA3Q8NHX4 192 aa16.28■□□□□ 0.2
CTSA-206ENST00000480961 EDARADDQ8WWZ3 215 aa16.28■□□□□ 0.2
CTSA-206ENST00000480961 SLC25A33Q9BSK2 321 aa16.28■□□□□ 0.2
CTSA-206ENST00000480961 CCDC59Q9P031 241 aaKnown RBP16.28■□□□□ 0.2
CTSA-206ENST00000480961 ANXA10Q9UJ72 324 aa16.28■□□□□ 0.2
CTSA-206ENST00000480961 TMEM11P17152 192 aa16.27■□□□□ 0.2
CTSA-206ENST00000480961 PRSS3P35030 304 aa16.27■□□□□ 0.2
CTSA-206ENST00000480961 COMPP49747 757 aaPredicted RBP16.27■□□□□ 0.2
CTSA-206ENST00000480961 BLCAPP62952 87 aa16.27■□□□□ 0.2
CTSA-206ENST00000480961 Q6ZS46 218 aa16.27■□□□□ 0.2
CTSA-206ENST00000480961 ZNF833PQ6ZTB9 187 aa16.27■□□□□ 0.2
CTSA-206ENST00000480961 THNSL2Q86YJ6 484 aa16.27■□□□□ 0.2
CTSA-206ENST00000480961 LAX1Q8IWV1 398 aa16.27■□□□□ 0.2
CTSA-206ENST00000480961 BEST4Q8NFU0 473 aa16.27■□□□□ 0.2
CTSA-206ENST00000480961 LINC01006Q8NI28 216 aa16.27■□□□□ 0.2
CTSA-206ENST00000480961 ZNF251Q9BRH9 671 aa16.27■□□□□ 0.2
CTSA-206ENST00000480961 NPFFR1Q9GZQ6 430 aa16.27■□□□□ 0.2
CTSA-206ENST00000480961 BEX1Q9HBH7 125 aa16.27■□□□□ 0.2
CTSA-206ENST00000480961 EXTL2Q9UBQ6 330 aa16.27■□□□□ 0.2
CTSA-206ENST00000480961 ITGB1BP1O14713 200 aa16.26■□□□□ 0.19
CTSA-206ENST00000480961 RAB29O14966 203 aa16.26■□□□□ 0.19
CTSA-206ENST00000480961 LPLP06858 475 aa16.26■□□□□ 0.19
CTSA-206ENST00000480961 NFYAP23511 347 aaPredicted RBP16.26■□□□□ 0.19
CTSA-206ENST00000480961 ARPC4P59998 168 aa16.26■□□□□ 0.19
CTSA-206ENST00000480961 HABP2Q14520 560 aaPredicted RBP16.26■□□□□ 0.19
CTSA-206ENST00000480961 RNASE12Q5GAN4 147 aaKnown RBP16.26■□□□□ 0.19
CTSA-206ENST00000480961 CNIH2Q6PI25 160 aa16.26■□□□□ 0.19
CTSA-206ENST00000480961 H1FOOQ8IZA3 346 aaPredicted RBP16.26■□□□□ 0.19
CTSA-206ENST00000480961 OR4C13Q8NGP0 309 aa16.26■□□□□ 0.19
CTSA-206ENST00000480961 SNAPC3Q92966 411 aa16.26■□□□□ 0.19
CTSA-206ENST00000480961 EAF1Q96JC9 268 aaPredicted RBP16.26■□□□□ 0.19
CTSA-206ENST00000480961 RBM14Q96PK6 669 aaKnown RBP16.26■□□□□ 0.19
CTSA-206ENST00000480961 NABP2Q9BQ15 211 aa16.26■□□□□ 0.19
CTSA-206ENST00000480961 DCUN1D5Q9BTE7 237 aa16.26■□□□□ 0.19
CTSA-206ENST00000480961 IFT46Q9NQC8 304 aa16.26■□□□□ 0.19
CTSA-206ENST00000480961 PIPOXQ9P0Z9 390 aa16.26■□□□□ 0.19
CTSA-206ENST00000480961 RSL24D1Q9UHA3 163 aaKnown RBP16.26■□□□□ 0.19
CTSA-206ENST00000480961 CLPSL1A2RUU4 121 aa16.25■□□□□ 0.19
CTSA-206ENST00000480961 TSPAN9O75954 239 aa16.25■□□□□ 0.19
CTSA-206ENST00000480961 OR2F2O95006 317 aa16.25■□□□□ 0.19
CTSA-206ENST00000480961 GPR12P47775 334 aa16.25■□□□□ 0.19
CTSA-206ENST00000480961 LINC00205P59089 165 aa16.25■□□□□ 0.19
CTSA-206ENST00000480961 GLDNQ6ZMI3 551 aaPredicted RBP16.25■□□□□ 0.19
CTSA-206ENST00000480961 C3orf56Q8N813 242 aa16.25■□□□□ 0.19
CTSA-206ENST00000480961 DRAXINQ8NBI3 349 aaPredicted RBP16.25■□□□□ 0.19
CTSA-206ENST00000480961 S1PR3Q99500 378 aa16.25■□□□□ 0.19
CTSA-206ENST00000480961 SLIRPQ9GZT3 109 aaKnown RBP16.25■□□□□ 0.19
CTSA-206ENST00000480961 C6orf62Q9GZU0 229 aaPredicted RBP16.25■□□□□ 0.19
CTSA-206ENST00000480961 TOLLIPQ9H0E2 274 aa16.25■□□□□ 0.19
CTSA-206ENST00000480961 C16orf95Q9H693 158 aa16.25■□□□□ 0.19
CTSA-206ENST00000480961 ZNF221Q9UK13 617 aa16.25■□□□□ 0.19
CTSA-206ENST00000480961 RBM7Q9Y580 266 aaKnown RBP16.25■□□□□ 0.19
CTSA-206ENST00000480961 HAX1O00165 279 aa16.24■□□□□ 0.19
CTSA-206ENST00000480961 TXNL1O43396 289 aa16.24■□□□□ 0.19
CTSA-206ENST00000480961 PROP1O75360 226 aa16.24■□□□□ 0.19
CTSA-206ENST00000480961 CTXN2P0C2S0 81 aa16.24■□□□□ 0.19
CTSA-206ENST00000480961 CT45A6P0DMU7 189 aa16.24■□□□□ 0.19
CTSA-206ENST00000480961 CT45A5P0DMU8 189 aa16.24■□□□□ 0.19
CTSA-206ENST00000480961 CT45A7P0DMV0 189 aa16.24■□□□□ 0.19
CTSA-206ENST00000480961 CD1BP29016 333 aa16.24■□□□□ 0.19
CTSA-206ENST00000480961 CBX5P45973 191 aa16.24■□□□□ 0.19
CTSA-206ENST00000480961 LSAMPQ13449 338 aa16.24■□□□□ 0.19
CTSA-206ENST00000480961 OR2D2Q9H210 308 aa16.24■□□□□ 0.19
CTSA-206ENST00000480961 ZNF702PQ9H963 129 aa16.24■□□□□ 0.19
CTSA-206ENST00000480961 DIRAS3O95661 229 aa16.23■□□□□ 0.19
CTSA-206ENST00000480961 AMY1AP04745 511 aa16.23■□□□□ 0.19
CTSA-206ENST00000480961 AMY2AP04746 511 aa16.23■□□□□ 0.19
CTSA-206ENST00000480961 SRSF4Q08170 494 aaKnown RBP16.23■□□□□ 0.19
CTSA-206ENST00000480961 OR2T10Q8NGZ9 312 aa16.23■□□□□ 0.19
CTSA-206ENST00000480961 MCFD2Q8NI22 146 aa16.23■□□□□ 0.19
CTSA-206ENST00000480961 C5orf30Q96GV9 206 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms