RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 ATP23Q9Y6H3 246 aa9.05□□□□□ -0.96
SIK3-210ENST00000480468 RALGAPA1Q6GYQ0 2036 aa9.05□□□□□ -0.96
SIK3-210ENST00000480468 A0A1W2PQF6 199 aa9.05□□□□□ -0.96
SIK3-210ENST00000480468 CCDC85CA6NKD9 419 aa9.05□□□□□ -0.96
SIK3-210ENST00000480468 WDR1O75083 606 aa9.05□□□□□ -0.96
SIK3-210ENST00000480468 C1QTNF9P0C862 333 aa9.05□□□□□ -0.96
SIK3-210ENST00000480468 PSG2P11465 335 aa9.05□□□□□ -0.96
SIK3-210ENST00000480468 FKBP2P26885 142 aaKnown RBP9.05□□□□□ -0.96
SIK3-210ENST00000480468 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.05□□□□□ -0.96
SIK3-210ENST00000480468 SLC22A18ASQ8N1D0 253 aa9.05□□□□□ -0.96
SIK3-210ENST00000480468 OR5T1Q8NG75 326 aa9.05□□□□□ -0.96
SIK3-210ENST00000480468 OR4C5Q8NGB2 326 aa9.05□□□□□ -0.96
SIK3-210ENST00000480468 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.05□□□□□ -0.96
SIK3-210ENST00000480468 SOHLH2Q9NX45 425 aa9.05□□□□□ -0.96
SIK3-210ENST00000480468 PLEK2Q9NYT0 353 aa9.05□□□□□ -0.96
SIK3-210ENST00000480468 IGKV1-6A0A0C4DH72 117 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 IGHV1-69-2A0A0G2JMI3 117 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 RBFOX2O43251 390 aaKnown RBP eCLIP9.04□□□□□ -0.96
SIK3-210ENST00000480468 IGKV1-39P01597 117 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 IGKV1D-39P04432 117 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 COL9A1P20849 921 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 CBLN1P23435 193 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 TNFSF4P23510 183 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 TSPOP30536 169 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 TIMP3P35625 211 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 CLDN17P56750 224 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 KRTDAPP60985 99 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 TLE1Q04724 770 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 TRIM61Q5EBN2 209 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 SPANXN5Q5MJ07 72 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 NUDT10Q8NFP7 164 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 OR13H1Q8NG92 308 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 OR10G8Q8NGN5 311 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 OR2AE1Q8NHA4 323 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 IL36BQ9NZH7 164 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 OR2W1Q9Y3N9 320 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 RNF114Q9Y508 228 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 IGHV2-26A0A0B4J1V2 119 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 A0A1W2PNR3 127 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 H3BMH7 237 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 HMGB3O15347 200 aaKnown RBP9.04□□□□□ -0.96
SIK3-210ENST00000480468 IGKV1-5P01602 117 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 RHOGP84095 191 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 OR10J3Q5JRS4 329 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 PCSK4Q6UW60 755 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 RAB1CQ92928 201 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 KLHDC7BQ96G42 594 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 OR6C1Q96RD1 312 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 NRN1Q9NPD7 142 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 MRPL27Q9P0M9 148 aaKnown RBP9.04□□□□□ -0.96
SIK3-210ENST00000480468 RTTNQ86VV8 2226 aa9.04□□□□□ -0.96
SIK3-210ENST00000480468 TRBV6-6A0A0A6YYG2 114 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 RNF212BA8MTL3 300 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 TNFSF11O14788 317 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 DHHO43323 396 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 NDUFB4O95168 129 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 ATXN8OSP0DMR3 200 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 HOXB2P14652 356 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 PRRX1P54821 245 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 ZNF90Q03938 601 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 PDCD1Q15116 288 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 TRIP6Q15654 476 aaKnown RBP9.03□□□□□ -0.96
SIK3-210ENST00000480468 ZNF324BQ6AW86 544 aaPredicted RBP9.03□□□□□ -0.96
SIK3-210ENST00000480468 UNQ5815/PRO19632Q6UWF5 114 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 KMT5CQ86Y97 462 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 YAF2Q8IY57 180 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 C12orf76Q8N812 135 aaPredicted RBP9.03□□□□□ -0.96
SIK3-210ENST00000480468 ZIC4Q8N9L1 334 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 LRFN3Q9BTN0 628 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 GNB1LQ9BYB4 327 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 TBL2Q9Y4P3 447 aaKnown RBP9.03□□□□□ -0.96
SIK3-210ENST00000480468 C2orf16Q68DN1 1984 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 SEC16AO15027 2179 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 IGHV5-51A0A0C4DH38 117 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 LILRA5A6NI73 299 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 SYNGR3O43761 229 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 MT-ND6P03923 174 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 FBLP22087 321 aaKnown RBP9.03□□□□□ -0.96
SIK3-210ENST00000480468 LGALS4P56470 323 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 IZUMO4Q1ZYL8 232 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 RNF151Q2KHN1 245 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 VWC2Q2TAL6 325 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 KRTAP27-1Q3LI81 207 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 COX19Q49B96 90 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 PHYHD1Q5SRE7 291 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 FAM27BQ5VT28 67 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 C19orf35Q6ZS72 473 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 TIPARPQ7Z3E1 657 aaKnown RBP9.03□□□□□ -0.96
SIK3-210ENST00000480468 MYPOPQ86VE0 399 aaPredicted RBP9.03□□□□□ -0.96
SIK3-210ENST00000480468 ZNF114Q8NC26 417 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 OR51H1Q8NH63 302 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 KCNS1Q96KK3 526 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 SEPSECSQ9HD40 501 aaKnown RBP9.03□□□□□ -0.96
SIK3-210ENST00000480468 TUBG2Q9NRH3 451 aa9.03□□□□□ -0.96
SIK3-210ENST00000480468 hCG_38984A0A1B0GV85 526 aa9.02□□□□□ -0.97
SIK3-210ENST00000480468 B4DGG1 531 aa9.02□□□□□ -0.97
SIK3-210ENST00000480468 CD38P28907 300 aa9.02□□□□□ -0.97
SIK3-210ENST00000480468 FASLGP48023 281 aa9.02□□□□□ -0.97
SIK3-210ENST00000480468 CDC34P49427 236 aaPredicted RBP9.02□□□□□ -0.97
SIK3-210ENST00000480468 HLA-DRB5Q30154 266 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms